CsaV3_6G052670 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G052670
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Coatomer subunit epsilon
Location	chr6: 30686067 .. 30689439 (-)
RNA-Seq Expression	CsaV3_6G052670
Synteny	CsaV3_6G052670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTTTGAAACAAATGAACTTCTAATAATTTAATCTTATTTATTTAAGAAAAAACAAAAACAAAAATATTTTTGGACCAAGAAGTAAAGCCCAAATTTTGGTTAAACGTTCAATTGCTTCGTCGGTCTTCTCTCTTTATCTCTCGCGTCTACTGGATTCAGATCTAGAGGAAGGAACTTGGACGAAGGAAGAGTAAAACCATGGCAGCACCAGATCATTTGTTCAATCTGAGAAATAATTTCTATTTGGGTGCGTATCAGGCAGCCATTAACAACAGTGATCTCCCCAATCTCTCCCCCGATGATGTAATCGAGAGGGATTCCATTGTTTTCCGCTCTTACATTGCTCTTGGCAGTTATCAGGTCTGTTCCCTCACATTACTCTGGCTCTGAGTATATTGATGCTTGGTTTGAATTTGTTTTGAATCTCTGTCCGTCCTCTTTCAGCTAGCGATCAGCGAGATCGACTCATCCGCCCCGACGCCTCTTCAAGCCGTCAAATTGCTCGCTCTGTATCTGTCTGATCCCAGTAGCAAGGTTTCATCCCTGGATCTAGACCCTCTTTTTAGCTGATTACCTTAATTGGGATATAAATTATTTTTTGTAATTCATAGAATTTCAATTATATTATTGGGTCACACATTTCTAACCTATGTCACTTCATTTTATAAATTCAAACCATACTTGATACCGATCTAGAACGAAGTACTTGAAGTCTCAAGAATTTTTTACTGGGAATTCAATGTTCATGACTCCATTTTATTGGGTAGTAATGTATGCTACCTTTTCATTTGGGGGGTGTGAGTGGTGGTGGATGAGGGAAGGGGAAGCAATGCATAATCTCGGTAATGAACGGATAGAAGTTTTTAGTATTTCGTAATAGAAATCTGTGCATAATTGGATGAATATTAAAATGTCACGTAACGTGTGAGTAAGCTAGGCAATTCAAACCAACCCAAAAGATTTCAGATTTTACCACTTGTACTGGACGATCGGGGTTCAGAAGAAAATGAAGACGTTTTTCTTCTTCATGAGGGTAGAGTAATCATAGTTTCTTTACCGATGAATTTATTGAATGTTGTAGGAATCTACCATCGCAAGTCTACAGGAATGGCTATCAGATCCAGCCATTGGAAACAATTCTACTTTGAGGCTAATTGCCGGAATCATATTCATGCATGAACAAGATTATAATGAAGCCTTGAAACACACAAATGCTGGAGGAACCATGGAATTGTAAGTCTCGTTTTGAATGTTTTACAAGTATTCATATCTTTCATCGTTATGGTTTCAATTTTTAGATGCATTAAGGGTGAGGTACATAGACTGTGAAGATTTTCAAATACTATTATTTATTTATTAAATATCTTATTTTTCTATATATAAAACTCGTAACCACTCGGCAGAACTGGTAATTTTAATTTAGTTCACTATGTAACTACAAACTAGTAATGGTAGACCAGTGTCGTCTTTTACTCTCTTCCATGTAGCCACCATTCAATTATCTTCGTCTTGCTTTCTTTCTGAATGTCCGTTTTTCTGGGGAGGAATACAGTACCGTCGTCACGTATTGAAAACCAATGTTGTCACTGGAAGTGCATACTGTAATTATCTCGAGCCTGATTTTATTTTTTCCTTGCAGGCATGCGCTGAATGTTCAAATATTTCTTAAGATGCACAGGTCAGATTATGCAGAGAGACAGCTGCGAGTCATGCAACAGATTGATGAGGATCACACATTAACACAACTTGCAAATGCTTGGTTAAATCTAGCAGTGGTTTGTAGTTTATATTTTAATTACTCTGAAGAAAGGAATGTAGACTTTTTGGGGCTAGTCTCATTATTCTGTAATTTTTTGCTTGACCAGGGTGGTTCCAAGATACAAGAAGCATATCTCATCTTCCAAGATTTCTCCGAAAAGTATCCCATGACAAGCTTGATTTTGAATGGAAGGGCTGTCTGCTGCATGCATATGGGAAACTTTGATGAAGCGGAGACACTTCTTCTTGAAGCACTGAACAAGGTTGTTTTCGGATGTCTCTGCATTTGATTACTTATACTGTATAACTGAAATAGTTTATCTGTCGGGATCAAGATTATTGGCGCAGATTAGTGACTGATAAAAAAGAAGAAATGAAAAAAATCTGTCTTTGTAACTTGGTTGTCTTCAGTGAGATTCCAATTTGGTCAAAGTTTCAGATAGATTGAACATTTTCAGGACAACTTAGGATGTAAGTAGCATCTGTGAATTTTTTATTGTAGTAAGAAGTTTCTTTGTTTGTTTTCACAGGATGCAAAAGATCCCGAAACTCTGGCCAATTTAGTTGTATGCAGTCTTCACCTTGGCAAACCAACTTCTCGTTTTCTCAGGTAATTGGTGGGGATTGATGCCCAGAAATCTTTTTCTTCCTTACTCTCTTCTTTTATGTTTGGTTGTTTGGTCGCAATACTTTTGTATACTCTGCATCTTTGTGGGAATTGTGGACTGAAGCTAGTTTATTAGCTAAATTCTATGTTCACCTAAATTCTAGAAAGTTTTTTAAAGGAGGTTGGAGGGACATTTTGAGAGTAGTATTTTGAAGAAACTAAACCCATTTTCTAAAAATATTTAATAGGGGATTTAATGTTGGTTTGAATATTGGAGACTGATATTTGAGATTCTTCTATTGTACCGTAGGTCTTGTTTTGCTCGTTTAATATCTATATTCAGAAATTTTCTTTGCCCTACTTCTGTCTTGCATCTTCATATTTAATATTTAATGTTTACCTGGAAATACGTTGTTTGTTTTTATTTTAACTGCTGTTATGGCAAATCCATCCACAAGTTGGATTATAATTTTATCTTTCATGGCTGCTGCTATTGCTAACAAACTCGCCACATATTTTCAGCCAATTGAAAATTTCGCATCCCGACCACATGCTTGTTAAACGCATCTCGACCGCTGAAGAAAACTTTGATAGAGCTGTTCAATCTGTTGCTTAGAGAACCCCTTGCTGCTTTTGAAAGAAGATGAACGATGTTTACTAGTGTTAAACGACAGTCAGTCTTGTACCCCGCGGCTGTTCACTGCCAAGGGGCCGTTGATTTTGCTCAAACTATTTGGCTATTAAATACCAAATCGAACCAAATGTTTGACATTAGAAGTTATAACGCATAATTGTGGTCATTTTTTGTACTAAGCTTCCTGAATGTGATCCATACTTATTCTTTACCATTTTCATTTGTTAAGTCTTTGGTTAAAGACGACGGCTTTTCAAGTTTCACTGTTTAATATTATAGTATTATACCACAAGCTACAGCCAGTGTTTAATAATTATTCTCATTCTCAATCTAGAATAATTTTTAAAAGTGTTCGAAGCATAAGAAATTCC

mRNA sequence

ATGGCAGCACCAGATCATTTGTTCAATCTGAGAAATAATTTCTATTTGGGTGCGTATCAGGCAGCCATTAACAACAGTGATCTCCCCAATCTCTCCCCCGATGATGTAATCGAGAGGGATTCCATTGTTTTCCGCTCTTACATTGCTCTTGGCAGTTATCAGCTAGCGATCAGCGAGATCGACTCATCCGCCCCGACGCCTCTTCAAGCCGTCAAATTGCTCGCTCTGTATCTGTCTGATCCCAGTAGCAAGGAATCTACCATCGCAAGTCTACAGGAATGGCTATCAGATCCAGCCATTGGAAACAATTCTACTTTGAGGCTAATTGCCGGAATCATATTCATGCATGAACAAGATTATAATGAAGCCTTGAAACACACAAATGCTGGAGGAACCATGGAATTGCATGCGCTGAATGTTCAAATATTTCTTAAGATGCACAGGTCAGATTATGCAGAGAGACAGCTGCGAGTCATGCAACAGATTGATGAGGATCACACATTAACACAACTTGCAAATGCTTGGTTAAATCTAGCAGTGGGTGGTTCCAAGATACAAGAAGCATATCTCATCTTCCAAGATTTCTCCGAAAAGTATCCCATGACAAGCTTGATTTTGAATGGAAGGGCTGTCTGCTGCATGCATATGGGAAACTTTGATGAAGCGGAGACACTTCTTCTTGAAGCACTGAACAAGGATGCAAAAGATCCCGAAACTCTGGCCAATTTAGTTGTATGCAGTCTTCACCTTGGCAAACCAACTTCTCGTTTTCTCAGCCAATTGAAAATTTCGCATCCCGACCACATGCTTGTTAAACGCATCTCGACCGCTGAAGAAAACTTTGATAGAGCTGTTCAATCTGTTGCTTAG

Coding sequence (CDS)

ATGGCAGCACCAGATCATTTGTTCAATCTGAGAAATAATTTCTATTTGGGTGCGTATCAGGCAGCCATTAACAACAGTGATCTCCCCAATCTCTCCCCCGATGATGTAATCGAGAGGGATTCCATTGTTTTCCGCTCTTACATTGCTCTTGGCAGTTATCAGCTAGCGATCAGCGAGATCGACTCATCCGCCCCGACGCCTCTTCAAGCCGTCAAATTGCTCGCTCTGTATCTGTCTGATCCCAGTAGCAAGGAATCTACCATCGCAAGTCTACAGGAATGGCTATCAGATCCAGCCATTGGAAACAATTCTACTTTGAGGCTAATTGCCGGAATCATATTCATGCATGAACAAGATTATAATGAAGCCTTGAAACACACAAATGCTGGAGGAACCATGGAATTGCATGCGCTGAATGTTCAAATATTTCTTAAGATGCACAGGTCAGATTATGCAGAGAGACAGCTGCGAGTCATGCAACAGATTGATGAGGATCACACATTAACACAACTTGCAAATGCTTGGTTAAATCTAGCAGTGGGTGGTTCCAAGATACAAGAAGCATATCTCATCTTCCAAGATTTCTCCGAAAAGTATCCCATGACAAGCTTGATTTTGAATGGAAGGGCTGTCTGCTGCATGCATATGGGAAACTTTGATGAAGCGGAGACACTTCTTCTTGAAGCACTGAACAAGGATGCAAAAGATCCCGAAACTCTGGCCAATTTAGTTGTATGCAGTCTTCACCTTGGCAAACCAACTTCTCGTTTTCTCAGCCAATTGAAAATTTCGCATCCCGACCACATGCTTGTTAAACGCATCTCGACCGCTGAAGAAAACTTTGATAGAGCTGTTCAATCTGTTGCTTAG

Protein sequence

MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEIDSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETLANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA*

Homology

[Close]

BLAST of CsaV3_6G052670 vs. NCBI nr
Match: XP_004134547.1 (coatomer subunit epsilon-1 [Cucumis sativus] >KGN49495.1 hypothetical protein Csa_003881 [Cucumis sativus])

HSP 1 Score: 574.3 bits (1479), Expect = 5.8e-160
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 289

[Close]

BLAST of CsaV3_6G052670 vs. NCBI nr
Match: XP_008439506.1 (PREDICTED: coatomer subunit epsilon-1-like [Cucumis melo])

HSP 1 Score: 567.8 bits (1462), Expect = 5.5e-158
Identity = 284/289 (98.27%), Postives = 287/289 (99.31%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDD IERDSIVFRSYIALGSYQLAISEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDAIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPS+KESTIASLQEWLSDPAIGNN TLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSNKESTIASLQEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           ANLVVC+LHLGKPTSRFLSQLK+SHPDHMLVKRISTAEENFDRAVQSVA
Sbjct: 241 ANLVVCNLHLGKPTSRFLSQLKLSHPDHMLVKRISTAEENFDRAVQSVA 289

[Close]

BLAST of CsaV3_6G052670 vs. NCBI nr
Match: KAA0052455.1 (coatomer subunit epsilon-1-like [Cucumis melo var. makuwa] >TYK13367.1 coatomer subunit epsilon-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 566.2 bits (1458), Expect = 1.6e-157
Identity = 283/289 (97.92%), Postives = 286/289 (98.96%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDD IERDSIVFRSYIALGSYQLAISEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDAIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDP +KESTIASLQEWLSDPAIGNN TLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPGNKESTIASLQEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           ANLVVC+LHLGKPTSRFLSQLK+SHPDHMLVKRISTAEENFDRAVQSVA
Sbjct: 241 ANLVVCNLHLGKPTSRFLSQLKLSHPDHMLVKRISTAEENFDRAVQSVA 289

[Close]

BLAST of CsaV3_6G052670 vs. NCBI nr
Match: XP_038883808.1 (coatomer subunit epsilon-1-like [Benincasa hispida])

HSP 1 Score: 558.9 bits (1439), Expect = 2.5e-155
Identity = 281/289 (97.23%), Postives = 283/289 (97.92%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDD IERDSIVFRSYIALGSYQLAISEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDAIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGN+  LRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNSPILRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQ DEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           ANLVVCSLHLGKPTSRFLSQLK+SHPDHMLVK IS AEENFDRAVQSVA
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHMLVKCISAAEENFDRAVQSVA 289

[Close]

BLAST of CsaV3_6G052670 vs. NCBI nr
Match: XP_022926620.1 (coatomer subunit epsilon-1-like [Cucurbita moschata] >XP_023517735.1 coatomer subunit epsilon-1-like [Cucurbita pepo subsp. pepo] >KAG6594404.1 Coatomer subunit epsilon-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 551.6 bits (1420), Expect = 4.1e-153
Identity = 275/288 (95.49%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MAAPDHLFNLRN+FYLGAYQAAINNS+LPNLSPDD IERDSIV+RSYIALGSYQL +SEI
Sbjct: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPSSKESTIASL EWLSDPAIGNN TLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQ DEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSV 289
           ANLVVCSLHLGKPTSRFLSQLK+SHPDH+LVKRIS AEENFDRAVQSV
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 288

[Close]

BLAST of CsaV3_6G052670 vs. ExPASy Swiss-Prot
Match: Q9SA78 (Coatomer subunit epsilon-1 OS=Arabidopsis thaliana OX=3702 GN=At1g30630 PE=2 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 3.5e-139
Identity = 235/289 (81.31%), Postives = 274/289 (94.81%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MA PDHLFNLRN+FYLGAYQAAINNS++PNLS +D++ERD +V R+YIALGSYQL ISEI
Sbjct: 4   MAGPDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEI 63

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           D +A TPLQAVKLLA+YLS P +KESTI+SL+EWL+DP +GNN+ +RLIAG IFMHE+DY
Sbjct: 64  DEAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDY 123

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
           NEALKHT++GGTM+LHALNVQIF+KMHRSD+AE+QLRVMQQIDEDHTLTQLA+AWLNLAV
Sbjct: 124 NEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAV 183

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYPMTSLILNG+AVCCMHMGNF+EAETLLLEALNKDAKDPETL
Sbjct: 184 GGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETL 243

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           ANLVVCSLH+GK +SR+L+QLK+SHP+H+LVKR ++AE+NF+RA+QS A
Sbjct: 244 ANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQSFA 292

[Close]

BLAST of CsaV3_6G052670 vs. ExPASy Swiss-Prot
Match: O64748 (Coatomer subunit epsilon-2 OS=Arabidopsis thaliana OX=3702 GN=At2g34840 PE=2 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 3.8e-138
Identity = 238/288 (82.64%), Postives = 269/288 (93.40%), Query Frame = 0


Query: 2   AAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEID 61
           A PDHLFNLRNNFYLGAYQ AINNS++ NLSP++ +ERD +VFRSYIALGSYQL ISEID
Sbjct: 6   AGPDHLFNLRNNFYLGAYQTAINNSEIANLSPENAVERDCLVFRSYIALGSYQLVISEID 65

Query: 62  SSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDYN 121
            SA TPLQAVKLLA+YLS P +KESTI+SL+EWL+D  IGNN TLRLIAGIIFMHE+DYN
Sbjct: 66  ESAATPLQAVKLLAMYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYN 125

Query: 122 EALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAVG 181
           E LKHT+AGGTM+L+ALNVQIF+KMHR++YAE+QLRVMQQIDEDHTLTQLA+AWLNLAVG
Sbjct: 126 ETLKHTHAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVG 185

Query: 182 GSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETLA 241
           GSKIQEAYLIF+DFSEKYPMT LILNG+AVCCM MGNFDEAETLLLEALNKDAKDPETLA
Sbjct: 186 GSKIQEAYLIFEDFSEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDAKDPETLA 245

Query: 242 NLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           NLVVCSLH+GK +SR LSQLK+SHP+H+LVKR+S+AE+NF+RAVQ VA
Sbjct: 246 NLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLVA 293

[Close]

BLAST of CsaV3_6G052670 vs. ExPASy Swiss-Prot
Match: Q9MAX6 (Coatomer subunit epsilon-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPE1 PE=2 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 8.3e-133
Identity = 231/289 (79.93%), Postives = 265/289 (91.70%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MA+PD LFNLRN FYLGAYQAAINNSD+P L  D   ERD+IVFRSY+ALGSYQL ISEI
Sbjct: 1   MASPDLLFNLRNLFYLGAYQAAINNSDVPGLDADAAAERDAIVFRSYVALGSYQLVISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           DSSA T LQAVKLLALYLS    KES I SL+EWLSD A+G+N  LRLIAGIIFMHEQDY
Sbjct: 61  DSSAATSLQAVKLLALYLS--GDKESAIVSLKEWLSDSAVGSNPVLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
            EALKHT++GGT++LHALNVQIF+KMHRSDYAE+QL++MQQIDEDHTLTQLANAWL++AV
Sbjct: 121 TEALKHTHSGGTLDLHALNVQIFIKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLDIAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKI+EAYLIFQDF+EKYPMT ++LNG+AVCCMHMG+FDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIREAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           ANL+VC+LHLGKP+SR+LSQLK+SHPDH+LVKR  +AE+NF+RA+Q+VA
Sbjct: 241 ANLIVCNLHLGKPSSRYLSQLKLSHPDHVLVKRAVSAEDNFERALQAVA 287

[Close]

BLAST of CsaV3_6G052670 vs. ExPASy Swiss-Prot
Match: P0C541 (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0644700 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.2e-109
Identity = 197/293 (67.24%), Postives = 242/293 (82.59%), Query Frame = 0


Query: 2   AAPDHLFNLRNNFYLGAYQAAINNSDL----PNLSPDDVIERDSIVFRSYIALGSYQLAI 61
           A+PDHLF LRN+FY+GAYQA I           LSPD + ERDS+++RSYIA+GS+QL I
Sbjct: 5   ASPDHLFGLRNSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVI 64

Query: 62  SEIDSSAPTPLQAVKLLALYLS-DPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMH 121
            EI   A TPLQAV+LL +YLS     KES I  L E L+D A+G+N  LRL+AG + MH
Sbjct: 65  DEIGPGAATPLQAVRLLTVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGTVLMH 124

Query: 122 EQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWL 181
           E+DY  ALKHTN+GGTMEL A+NVQI L+MHRSD+AE+QLR+MQQ+DEDHTLTQLANAW+
Sbjct: 125 ERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWV 184

Query: 182 NLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKD 241
           +L +GGSKIQEA+LIFQD SEKYP T LILNG+A+C MHMGNF++AE LLLE+LNKDAKD
Sbjct: 185 DLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESLNKDAKD 244

Query: 242 PETLANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
            ETLANLVVCSL+LGK  SR+L+QLK++HPDHMLVKR+S+AE++FDRA Q+++
Sbjct: 245 AETLANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAIS 297

[Close]

BLAST of CsaV3_6G052670 vs. ExPASy Swiss-Prot
Match: A2XY73 (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. indica OX=39946 GN=H0413E07.10 PE=3 SV=2)

HSP 1 Score: 395.2 bits (1014), Expect = 6.4e-109
Identity = 197/293 (67.24%), Postives = 242/293 (82.59%), Query Frame = 0


Query: 2   AAPDHLFNLRNNFYLGAYQAAINNSDL----PNLSPDDVIERDSIVFRSYIALGSYQLAI 61
           A+PDHLF LR +FY+GAYQA I           LSPD + ERDS+++RSYIA+GS+QL I
Sbjct: 5   ASPDHLFGLRYSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVI 64

Query: 62  SEIDSSAPTPLQAVKLLALYLS-DPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMH 121
            EI   A TPLQAV+LLA+YLS     KES I  L E L+D A+G+N  LRL+AG + MH
Sbjct: 65  DEIGPGAATPLQAVRLLAVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGTVLMH 124

Query: 122 EQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWL 181
           E+DY  ALKHTN+GGTMEL A+NVQI L+MHRSD+AE+QLR+MQQ+DEDHTLTQLANAW+
Sbjct: 125 ERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWV 184

Query: 182 NLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKD 241
           +L +GGSKIQEA+LIFQD SEKYP T LILNG+A+C MHMGNF++AE LLLE+LNKDAKD
Sbjct: 185 DLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESLNKDAKD 244

Query: 242 PETLANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
            ETLANLVVCSL+LGK  SR+L+QLK++HPDHMLVKR+S+AE++FDRA Q+++
Sbjct: 245 AETLANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAIS 297

[Close]

BLAST of CsaV3_6G052670 vs. ExPASy TrEMBL
Match: A0A0A0KIF7 (Coatomer subunit epsilon OS=Cucumis sativus OX=3659 GN=Csa_6G526290 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.8e-160
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 289

[Close]

BLAST of CsaV3_6G052670 vs. ExPASy TrEMBL
Match: A0A1S3AYY0 (Coatomer subunit epsilon OS=Cucumis melo OX=3656 GN=LOC103484285 PE=3 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 2.6e-158
Identity = 284/289 (98.27%), Postives = 287/289 (99.31%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDD IERDSIVFRSYIALGSYQLAISEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDAIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPS+KESTIASLQEWLSDPAIGNN TLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSNKESTIASLQEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           ANLVVC+LHLGKPTSRFLSQLK+SHPDHMLVKRISTAEENFDRAVQSVA
Sbjct: 241 ANLVVCNLHLGKPTSRFLSQLKLSHPDHMLVKRISTAEENFDRAVQSVA 289

[Close]

BLAST of CsaV3_6G052670 vs. ExPASy TrEMBL
Match: A0A5A7UFG1 (Coatomer subunit epsilon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009940 PE=3 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 7.7e-158
Identity = 283/289 (97.92%), Postives = 286/289 (98.96%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDD IERDSIVFRSYIALGSYQLAISEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDAIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDP +KESTIASLQEWLSDPAIGNN TLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPGNKESTIASLQEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           ANLVVC+LHLGKPTSRFLSQLK+SHPDHMLVKRISTAEENFDRAVQSVA
Sbjct: 241 ANLVVCNLHLGKPTSRFLSQLKLSHPDHMLVKRISTAEENFDRAVQSVA 289

[Close]

BLAST of CsaV3_6G052670 vs. ExPASy TrEMBL
Match: A0A6J1ELM6 (Coatomer subunit epsilon OS=Cucurbita moschata OX=3662 GN=LOC111433698 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.0e-153
Identity = 275/288 (95.49%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MAAPDHLFNLRN+FYLGAYQAAINNS+LPNLSPDD IERDSIV+RSYIALGSYQL +SEI
Sbjct: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPSSKESTIASL EWLSDPAIGNN TLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQ DEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSV 289
           ANLVVCSLHLGKPTSRFLSQLK+SHPDH+LVKRIS AEENFDRAVQSV
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 288

[Close]

BLAST of CsaV3_6G052670 vs. ExPASy TrEMBL
Match: A0A6J1KS67 (Coatomer subunit epsilon OS=Cucurbita maxima OX=3661 GN=LOC111496767 PE=3 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 7.5e-153
Identity = 274/288 (95.14%), Postives = 280/288 (97.22%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MAAPDHLFNLRN+FYLGAYQAAINNS+LPNLSPDD IERDSIV+RSYIALGSYQL +SEI
Sbjct: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPSSKESTIASL EWLSDPAIGNN TLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQ DEDHTL QLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLAQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSV 289
           ANLVVCSLHLGKPTSRFLSQLK+SHPDH+LVKRIS AEENFDRAVQSV
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 288

[Close]

BLAST of CsaV3_6G052670 vs. TAIR 10
Match: AT1G30630.1 (Coatomer epsilon subunit )

HSP 1 Score: 495.7 bits (1275), Expect = 2.5e-140
Identity = 235/289 (81.31%), Postives = 274/289 (94.81%), Query Frame = 0


Query: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60
           MA PDHLFNLRN+FYLGAYQAAINNS++PNLS +D++ERD +V R+YIALGSYQL ISEI
Sbjct: 4   MAGPDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEI 63

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120
           D +A TPLQAVKLLA+YLS P +KESTI+SL+EWL+DP +GNN+ +RLIAG IFMHE+DY
Sbjct: 64  DEAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDY 123

Query: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180
           NEALKHT++GGTM+LHALNVQIF+KMHRSD+AE+QLRVMQQIDEDHTLTQLA+AWLNLAV
Sbjct: 124 NEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAV 183

Query: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYPMTSLILNG+AVCCMHMGNF+EAETLLLEALNKDAKDPETL
Sbjct: 184 GGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETL 243

Query: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           ANLVVCSLH+GK +SR+L+QLK+SHP+H+LVKR ++AE+NF+RA+QS A
Sbjct: 244 ANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQSFA 292

[Close]

BLAST of CsaV3_6G052670 vs. TAIR 10
Match: AT2G34840.1 (Coatomer epsilon subunit )

HSP 1 Score: 492.3 bits (1266), Expect = 2.7e-139
Identity = 238/288 (82.64%), Postives = 269/288 (93.40%), Query Frame = 0


Query: 2   AAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEID 61
           A PDHLFNLRNNFYLGAYQ AINNS++ NLSP++ +ERD +VFRSYIALGSYQL ISEID
Sbjct: 6   AGPDHLFNLRNNFYLGAYQTAINNSEIANLSPENAVERDCLVFRSYIALGSYQLVISEID 65

Query: 62  SSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDYN 121
            SA TPLQAVKLLA+YLS P +KESTI+SL+EWL+D  IGNN TLRLIAGIIFMHE+DYN
Sbjct: 66  ESAATPLQAVKLLAMYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYN 125

Query: 122 EALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAVG 181
           E LKHT+AGGTM+L+ALNVQIF+KMHR++YAE+QLRVMQQIDEDHTLTQLA+AWLNLAVG
Sbjct: 126 ETLKHTHAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVG 185

Query: 182 GSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETLA 241
           GSKIQEAYLIF+DFSEKYPMT LILNG+AVCCM MGNFDEAETLLLEALNKDAKDPETLA
Sbjct: 186 GSKIQEAYLIFEDFSEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDAKDPETLA 245

Query: 242 NLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           NLVVCSLH+GK +SR LSQLK+SHP+H+LVKR+S+AE+NF+RAVQ VA
Sbjct: 246 NLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLVA 293

[Close]

BLAST of CsaV3_6G052670 vs. TAIR 10
Match: AT2G34840.2 (Coatomer epsilon subunit )

HSP 1 Score: 372.1 bits (954), Expect = 4.1e-103
Identity = 178/214 (83.18%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 76  LYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDYNEALKHTNAGGTMEL 135
           +YLS P +KESTI+SL+EWL+D  IGNN TLRLIAGIIFMHE+DYNE LKHT+AGGTM+L
Sbjct: 1   MYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYNETLKHTHAGGTMDL 60

Query: 136 HALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDF 195
           +ALNVQIF+KMHR++YAE+QLRVMQQIDEDHTLTQLA+AWLNLAVGGSKIQEAYLIF+DF
Sbjct: 61  YALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFEDF 120

Query: 196 SEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETLANLVVCSLHLGKPTS 255
           SEKYPMT LILNG+AVCCM MGNFDEAETLLLEALNKDAKDPETLANLVVCSLH+GK +S
Sbjct: 121 SEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDAKDPETLANLVVCSLHVGKSSS 180

Query: 256 RFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 290
           R LSQLK+SHP+H+LVKR+S+AE+NF+RAVQ VA
Sbjct: 181 RHLSQLKLSHPEHILVKRVSSAEDNFERAVQLVA 214

The following BLAST results are available for this feature:

BLAST of CsaV3_6G052670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134547.1	5.8e-160	100.00	coatomer subunit epsilon-1 [Cucumis sativus] >KGN49495.1 hypothetical protein Cs...	[more]
XP_008439506.1	5.5e-158	98.27	PREDICTED: coatomer subunit epsilon-1-like [Cucumis melo]	[more]
KAA0052455.1	1.6e-157	97.92	coatomer subunit epsilon-1-like [Cucumis melo var. makuwa] >TYK13367.1 coatomer ...	[more]
XP_038883808.1	2.5e-155	97.23	coatomer subunit epsilon-1-like [Benincasa hispida]	[more]
XP_022926620.1	4.1e-153	95.49	coatomer subunit epsilon-1-like [Cucurbita moschata] >XP_023517735.1 coatomer su...	[more]

BLAST of CsaV3_6G052670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA78	3.5e-139	81.31	Coatomer subunit epsilon-1 OS=Arabidopsis thaliana OX=3702 GN=At1g30630 PE=2 SV=...	[more]
O64748	3.8e-138	82.64	Coatomer subunit epsilon-2 OS=Arabidopsis thaliana OX=3702 GN=At2g34840 PE=2 SV=...	[more]
Q9MAX6	8.3e-133	79.93	Coatomer subunit epsilon-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPE1 PE=...	[more]
P0C541	2.2e-109	67.24	Coatomer subunit epsilon-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0644...	[more]
A2XY73	6.4e-109	67.24	Coatomer subunit epsilon-2 OS=Oryza sativa subsp. indica OX=39946 GN=H0413E07.10...	[more]

BLAST of CsaV3_6G052670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIF7	2.8e-160	100.00	Coatomer subunit epsilon OS=Cucumis sativus OX=3659 GN=Csa_6G526290 PE=3 SV=1	[more]
A0A1S3AYY0	2.6e-158	98.27	Coatomer subunit epsilon OS=Cucumis melo OX=3656 GN=LOC103484285 PE=3 SV=1	[more]
A0A5A7UFG1	7.7e-158	97.92	Coatomer subunit epsilon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1ELM6	2.0e-153	95.49	Coatomer subunit epsilon OS=Cucurbita moschata OX=3662 GN=LOC111433698 PE=3 SV=1	[more]
A0A6J1KS67	7.5e-153	95.14	Coatomer subunit epsilon OS=Cucurbita maxima OX=3661 GN=LOC111496767 PE=3 SV=1	[more]

BLAST of CsaV3_6G052670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30630.1	2.5e-140	81.31	Coatomer epsilon subunit	[more]
AT2G34840.1	2.7e-139	82.64	Coatomer epsilon subunit	[more]
AT2G34840.2	4.1e-103	83.18	Coatomer epsilon subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF04733	Coatomer_E	coord: 4..288 e-value: 8.7E-138 score: 458.6
None	No IPR available	PANTHER	PTHR10805:SF3	COATOMER SUBUNIT EPSILON-1	coord: 1..289
IPR006822	Coatomer, epsilon subunit	PIRSF	PIRSF016478	Epsilon-COP	coord: 2..289 e-value: 1.3E-91 score: 305.2
IPR006822	Coatomer, epsilon subunit	PANTHER	PTHR10805	COATOMER SUBUNIT EPSILON	coord: 1..289
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 5..289 e-value: 3.6E-107 score: 360.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 102..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G052670.1	CsaV3_6G052670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005198	structural molecule activity