CsaV3_6G051900 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G051900
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Glutaredoxin domain-containing protein
Location	chr6: 30207546 .. 30212454 (+)
RNA-Seq Expression	CsaV3_6G051900
Synteny	CsaV3_6G051900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGACCCTCATAGGCTTCAGAACATACCTTCTTTCAAATTGTCCCGCTATTCCTCCAGCGCCAGAGACTCCGATGCCAGCGATGACCTCCGATATACTAGCTTGAAAGACATTCTTCTGAATTCCCCGTCGTACAGCGGCGTAAATGATTTCAACGAATTCAATTCGTCAAATATTTCGATCAGAAACGAGCTGGTGAAAAGAGCGGCCTCGGCCTACCTTCAATCGGCCGCGATTTTGGTCAGCCGGAATGAAAGCGGTTTCGTCGGATTCTGGGAGAGGCTTAGGATCAAACTCGCCGCCCTCCGTTCCCGTTGGTGTGATTGTTTTCACCGTATTTTTGGCTTCTTTAGTTTTGCCTTAGACTAAGAACATCATTAGACCCCTTCCTCTATTTTTTTTTTTCTTCTAATTTTGTTTCGAATTTTGTTTTCTCATTTTAATCCTTTTCCTCCTAAAGTAGAAAAAAAAAAAAAAACCATTTAACATTTCTTCCTTTTGATGCTTCTTTAGTTTTCATTTTTTTTTTCTATTTGTGAATAAATTGTTTATAACCCACTAACTCTTTTCTTTCTTCATGTTGATTTAGTTGTTTAATTATGTTAGAAGTTTATTTAAAATTGTTGAAATTTAATCTTTAATTCACTATTTTTTAATTTTTCTTCCTTTTACCGATCAATATATAAGCTAATATTATTTTGTTTTAATTATTATTAAATTTTAAAACAAATAATCAACATATAAGAAATAAATAATGGGTTGGTTTCATCCATTATTAGAATATAAAATAAGTTAGAATTTATGTATATAATTTAAAAGTTAGATAATGTAATTCTTTTTGGGGTGTTTTTATATTGCTCTGTTAATCTTAAAAATTATGGTCAAGATAAGACCAAATTATTTTCCTTCAAATAATTAAACAAACATAGATAGCTTATAACACTATAGATTATATATATATAACAATCTGGTAGATGAATTATAACTTATAAATTGATTTCTTTGTATTGATCAATATGGTGAGGAAAATACAGAAAGTAAAGTTCTTTCCATATGTAGGCTGGCGTCTGATTTTTTCTGAAGTCTACTTTGTTACTCACGGCCACGGCTTGGTTCTACATGTAATATTCTCTTTCTTCCTTCCTCGTTCGCATTTTTTTCTTTTCATTCTTCGTTCTGCAGTCTTTTCTCAAGAGGAGGGGAGGAGAGGTGGAGCGTGGAGCGTGGAGCATTGGATGTGCTAATTGAGGTTGACGCCGTGATGAGGAAAAAAAGTTTAACCAAATTTTATGATGCCATCATGGAGGTACGTAGGAAAAGAAAAAGAAGAGAGAAAACTCAGAAAACGAGTAACAAACAGAGAAAACAAAAGTACAAACTTAATACACAAAGATTAAAAATGAGATTGAACTTATCACATAATAGAAACGATAATGTCTTGATTGAAGACCAACCATTTGCCACTTGGTCTGATCACCACTACCCTAAAAAGATTAAATTCCTTTCTTTTGGACCTAGCAGCAGCTCACAATGCCGTCCTCGGTACTCATGGTATTATATTACAATGTCGCCTGCCCACTGCAACAATTTCTCCAAATTGGCGTCTCTTTCCAGACAAGACTCTGAAACTCAAAGTCGTTTCTTGGACTTGATTCTTCAAGAATTCAACATACGTCTGTGGCCTTTCCAATGGATATATATATATATATCACCTCCTTCCTATATCCACCATCATTATTAAAGATCATCCTTTCAAGGGTAGGAAATCAGGAAATCCCTTTGGAAACATCTTGTTAGAGATTTCTTGTGGCAAGTTTGGCTTGAATGCAACAATCGACCATTCAACATTATACAACAACTCCTCTTTTATAACGCTAAACTTTGATTTTTCACTCTCGATTACTATTATGTTTTATCAGAACTTATTTATCTAAATAATAAATAGCATCATTCAAAATGAATCAAATGGGATGGATAGCGATGATAAAATTTCACTAGATATAGTTAGCTACCTACTTTGTTGCCTACTTCTACTTGACCATGGAGAAGAGAACAGTGGAAGTGTAGAACATAGTGTTAGAAAAAGAAAAGGAAGGAGGTGGACTAGAATGCAATTAAGAAAACAATGGGGGTAGAAGGTAAGGTAAAAAGGTTAACGGTCTGAAGAAGGCAGGATCTGACGGCGTCACGATCCTCGAGAAGAAAAGGACAGGGGACAAGGCTGACCGTCAAACGACGGCGTTTCAGACGTTCTTTGTCGGTTTGTCGGAATCACATTCCACATTTTCTTCCTTTCCTTCATTTCTTTCGTTTTATTCACTTCTGTCCTTTTCCATAAAATCCCATCCCCCCTTTTTTGGTAACCCCTTTAACGACGTCGTTCCTCTCCATTTCTCACCTTCTTTTATAAGTAATACAAACATAAAATTAAAATTACTTTAAGAAAAAGAAGAAAAAGGAAACTTACTTTTATTTACTACTTTTTTCTTCCACAAATATATTTTCTTCCAATATTTCAAATGTTGTTATTGTTAATTTATACTTTTCAATTAGACTCTTAATCTTAAAAGTTAATCAATTTAGATTACTTTTCAAAATAATTCATGAAACAATGTTGTGTTTTATAAAATTGACGAGGTTAATTAGTTAATTAGCATACAATTAATGGACTGGTTTTTATGAATTTATTGAAATTTAAGGGTTTAATTCATAACCAACGATTGCGTATAAGATTTGTTCACGGTACATAATGGAGGGAGTAAATTGTTAAACTTATAAAAATTAAAAGTGTGTATGGATCAAAAGATTTTAAAGTAGGTTTGTATTATTGAATATGTGAAAAATCATATAATACTATTTGTAATGGTTGAATCAACATAATTTTATGAGAAACATGGCAACTATTGTTCGAGCTTGTTTGAGGTATCATAAGGTTTTAAAATGAATGGTTTAATCTCGATGAATTATTCCTATCATTTTTTACTTCACAATGAATGAGAAAACATATCTATAATAATTTGATTTTCATTTGCATTTTAAACTAGAAATAGTTTAGATACACAGCAATAATCACACATTTAAATAAGTACAACATTAATCATAGTAAGGGTTAGGGTTTGGGTAAAATTGGAGTTAATTAAGATAGTAAATGGAAGGAAGAAAAAGGTAGTGGGTCCGAGGGTCAGAGAGAGATAGGCAGTTAAATATGTATGACGAATCCGTTAGTCCAAACTTTGACCGCTGACCAAATAACCTCTCCCTTTCAGTTTCTTCTCTTCCCTTTTCCTTTCGCATGTCCTCTTCTTTTTCTCTTTCTAATTTCACTAATAAATCCATTTTACATTTTACATTTTACATTATCAATCAAAAAACACTATATTTTCAAAACATAAATAATAATCATAATTATATACTCTCCATTGTCTTTTTTTTTTTCAAGTCATTTTCAATTTGATTATTTTTGTATTTTTTTCACTTCAAAATTTCAATTTTGTCTTACTTCAAAATATTATTAATTACCATCCACTCATCAATGATTTGTTTTTCTATCAAGTTATTGTTATAATATTTATGATTATGATCGTGCGTAAATATTAACAAAATATTTTGTCGGTATAAGTTTGTTGAATTTTTAAAAAAGTTTGAAGTTCATCTGATTATGAATTACCAAATACCATCCATTCCTTAACGTTTTACTTTGTAAATTCAGTTGAGATATTTGACATGTCATTTTTAGAGATCAAAATTTTATACATTTAGTCTTAAATTTTAGCTTTTTATATATATATACTATATCAAAATTCTCCATTATGGCTAATAATTTACTCTTGTCAATTTCACACAATATAATAATTTAATTTATTAAAATGAATCTAGCTCAACTTACACAGTTAGATGTTCAATTTTCTCGCTTCGGATATTGCAAAGAGAAATTATATCGTAAAATAAGCATCAAATGATATATGCCAAATTGTATTATTTGTATACAGAGATTAAAATAGATCGATACTAAAATTTCAATTTTTGGAATACATCAATTGATACTTATTTATAAGTAAAAATAAAATAGAAAAAAGCATGTATTTAGATTAATAATGAAGGAGTACCTTCACGTTGAATATTGTAGTTTTTACTTTTTTTTACAAAGATGAATATATCCATTAATTCTTAGTATTAATGTCGAACTGATTTACATTAAGATCGACAATCCATACCAATTATAAACTACAAAGCTAAATTATATTGTAATTTACAATTCAAAGTACAAACAATTATATATATATATATATAAACAATAATTTATGCAATCACTTCCAACAGAAGCACGCGCTGTAGCATAAAAAAAGAAAGAAAGAGAGAAAGAAAAAAAAAGAGAAAAAGGAGAAAATAATGTCGGAGTCCGTACATCAAATTCGCAGTTTGGGAACACCATAAAAGCACAGAATCAGCACTCGAAGAAATTTGAAAAAATATATATAGAGAGAGAGAAAGAAAGAAAGAAAAGGAAGAAAAAAGTTGAAAGCAGTTTCTTCATCTCTTTTTCAAAACAATGGAAATGGAATTAGCCAATCACCGGCCATTTGAGGTGGTCCGGCAGCTCGCGGAGTGCAATGCGGTGGTTGTTTTCAGCATCAGCGGCTGCTGCATGTGTACTGTTGTCAAGCGCCTTCTCTTCGGCCTTGGTGTCGGTCCCACCGTTGTCGAGCTCGATCATCTTTCTCATCCTTCCGCCGACGACATTCAAGCCGTTCTCCACCATCTCCTCCCCCACCAGCCTCACCCTATTCCTGCCGTCTTCGTCGGTGGTAAGTTCCTCGGTGGCCTCGAAACTCTCATGTCATCTCACATCAATGGCTCTCTCGTTCCCCTCCTCAAACAAGCTGGCGCTCTCTGGCTCTGATCTCAT

mRNA sequence

ATGGAAGACCCTCATAGGCTTCAGAACATACCTTCTTTCAAATTGTCCCGCTATTCCTCCAGCGCCAGAGACTCCGATGCCAGCGATGACCTCCGATATACTAGCTTGAAAGACATTCTTCTGAATTCCCCGTCGTACAGCGGCGTAAATGATTTCAACGAATTCAATTCGTCAAATATTTCGATCAGAAACGAGCTGGTGAAAAGAGCGGCCTCGGCCTACCTTCAATCGGCCGCGATTTTGGTCAGCCGGAATGAAAGCGGTTTCGTCGGATTCTGGGAGAGGCTTAGGATCAAACTCGCCGCCCTCCGTTCCCGTTGGTGTGATTGTTTTCACCGCTGGCGTCTGATTTTTTCTGAAGTCTACTTTGTTACTCACGGCCACGGCTTGGTTCTACATGTTAACGGTCTGAAGAAGGCAGGATCTGACGGCGTCACGATCCTCGAGAAGAAAAGGACAGGGGACAAGGCTGACCGTCAAACGACGGCGTTTCAGACGTTCTTTGTCGCCAATCACCGGCCATTTGAGGTGGTCCGGCAGCTCGCGGAGTGCAATGCGGTGGTTGTTTTCAGCATCAGCGGCTGCTGCATGTGTACTGTTGTCAAGCGCCTTCTCTTCGGCCTTGGTGTCGGTCCCACCGTTGTCGAGCTCGATCATCTTTCTCATCCTTCCGCCGACGACATTCAAGCCGTTCTCCACCATCTCCTCCCCCACCAGCCTCACCCTATTCCTGCCGTCTTCGTCGGTGGTAAGTTCCTCGGTGGCCTCGAAACTCTCATGTCATCTCACATCAATGGCTCTCTCGTTCCCCTCCTCAAACAAGCTGGCGCTCTCTGGCTCTGA

Coding sequence (CDS)

ATGGAAGACCCTCATAGGCTTCAGAACATACCTTCTTTCAAATTGTCCCGCTATTCCTCCAGCGCCAGAGACTCCGATGCCAGCGATGACCTCCGATATACTAGCTTGAAAGACATTCTTCTGAATTCCCCGTCGTACAGCGGCGTAAATGATTTCAACGAATTCAATTCGTCAAATATTTCGATCAGAAACGAGCTGGTGAAAAGAGCGGCCTCGGCCTACCTTCAATCGGCCGCGATTTTGGTCAGCCGGAATGAAAGCGGTTTCGTCGGATTCTGGGAGAGGCTTAGGATCAAACTCGCCGCCCTCCGTTCCCGTTGGTGTGATTGTTTTCACCGCTGGCGTCTGATTTTTTCTGAAGTCTACTTTGTTACTCACGGCCACGGCTTGGTTCTACATGTTAACGGTCTGAAGAAGGCAGGATCTGACGGCGTCACGATCCTCGAGAAGAAAAGGACAGGGGACAAGGCTGACCGTCAAACGACGGCGTTTCAGACGTTCTTTGTCGCCAATCACCGGCCATTTGAGGTGGTCCGGCAGCTCGCGGAGTGCAATGCGGTGGTTGTTTTCAGCATCAGCGGCTGCTGCATGTGTACTGTTGTCAAGCGCCTTCTCTTCGGCCTTGGTGTCGGTCCCACCGTTGTCGAGCTCGATCATCTTTCTCATCCTTCCGCCGACGACATTCAAGCCGTTCTCCACCATCTCCTCCCCCACCAGCCTCACCCTATTCCTGCCGTCTTCGTCGGTGGTAAGTTCCTCGGTGGCCTCGAAACTCTCATGTCATCTCACATCAATGGCTCTCTCGTTCCCCTCCTCAAACAAGCTGGCGCTCTCTGGCTCTGA

Protein sequence

MEDPHRLQNIPSFKLSRYSSSARDSDASDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHRWRLIFSEVYFVTHGHGLVLHVNGLKKAGSDGVTILEKKRTGDKADRQTTAFQTFFVANHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHLLPHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL*

Homology

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BLAST of CsaV3_6G051900 vs. NCBI nr
Match: KAE8647751.1 (hypothetical protein Csa_003767 [Cucumis sativus])

HSP 1 Score: 565.8 bits (1457), Expect = 2.0e-157
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MEDPHRLQNIPSFKLSRYSSSARDSDASDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI 60
           MEDPHRLQNIPSFKLSRYSSSARDSDASDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI
Sbjct: 1   MEDPHRLQNIPSFKLSRYSSSARDSDASDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI 60

Query: 61  SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHRWRLIFSE 120
           SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHRWRLIFSE
Sbjct: 61  SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHRWRLIFSE 120

Query: 121 VYFVTHGHGLVLHVNGLKKAGSDGVTILEKKRTGDKADRQTTAFQTFFVANHRPFEVVRQ 180
           VYFVTHGHGLVLHVNGLKKAGSDGVTILEKKRTGDKADRQTTAFQTFFVANHRPFEVVRQ
Sbjct: 121 VYFVTHGHGLVLHVNGLKKAGSDGVTILEKKRTGDKADRQTTAFQTFFVANHRPFEVVRQ 180

Query: 181 LAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHLLPHQP 240
           LAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHLLPHQP
Sbjct: 181 LAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHLLPHQP 240

Query: 241 HPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
           HPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL
Sbjct: 241 HPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 280

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BLAST of CsaV3_6G051900 vs. NCBI nr
Match: XP_022925986.1 (glutaredoxin-C9-like [Cucurbita moschata] >XP_023543935.1 glutaredoxin-C9-like [Cucurbita pepo subsp. pepo] >KAG6581443.1 Glutaredoxin-C1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034736.1 Glutaredoxin-C1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-53
Identity = 105/107 (98.13%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 174 PFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLH 233
           P+EVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLH
Sbjct: 8   PYEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLH 67

Query: 234 HLLPHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
           HLLPHQPHPIPAVFVGGKFLGGL+TLMSSHINGSLVPLLKQAGALWL
Sbjct: 68  HLLPHQPHPIPAVFVGGKFLGGLDTLMSSHINGSLVPLLKQAGALWL 114

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BLAST of CsaV3_6G051900 vs. NCBI nr
Match: KAA0052530.1 (putative E3 ubiquitin-protein ligase arkadia-A [Cucumis melo var. makuwa])

HSP 1 Score: 219.5 bits (558), Expect = 3.5e-53
Identity = 110/113 (97.35%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MEDPHRLQNIPSFKLSRYSSSARDSDASDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI 60
           MED H+LQNIPSFKLSRYSSSARDSDA DDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI
Sbjct: 7   MEDSHKLQNIPSFKLSRYSSSARDSDAGDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI 66

Query: 61  SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHR 114
           SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHR
Sbjct: 67  SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHR 119

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BLAST of CsaV3_6G051900 vs. NCBI nr
Match: XP_022925985.1 (uncharacterized protein LOC111433238 [Cucurbita moschata] >KAG6581442.1 hypothetical protein SDJN03_21444, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205.3 bits (521), Expect = 6.9e-49
Identity = 103/122 (84.43%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MEDPHRLQNIPSFKLSRYSSSARDSDASDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI 60
           M+DPH+LQN+PSFKLSRYSS+ RDSDA DDLRYTSLKDILLNSPSYSGVN+FNEFN SNI
Sbjct: 10  MDDPHKLQNLPSFKLSRYSSTVRDSDAGDDLRYTSLKDILLNSPSYSGVNEFNEFNLSNI 69

Query: 61  SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHRWRLIFSE 120
           +IRNELVKRAASAYLQSAAILV RNES FVGFWERLRIKLAALRSRWCDCF R+   F  
Sbjct: 70  TIRNELVKRAASAYLQSAAILVGRNESCFVGFWERLRIKLAALRSRWCDCFPRFFGFFRF 129

Query: 121 VY 123
           V+
Sbjct: 130 VF 131

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BLAST of CsaV3_6G051900 vs. NCBI nr
Match: KAG7034735.1 (hypothetical protein SDJN02_04465, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 205.3 bits (521), Expect = 6.9e-49
Identity = 103/122 (84.43%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MEDPHRLQNIPSFKLSRYSSSARDSDASDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI 60
           M+DPH+LQN+PSFKLSRYSS+ RDSDA DDLRYTSLKDILLNSPSYSGVN+FNEFN SNI
Sbjct: 1   MDDPHKLQNLPSFKLSRYSSTVRDSDAGDDLRYTSLKDILLNSPSYSGVNEFNEFNLSNI 60

Query: 61  SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHRWRLIFSE 120
           +IRNELVKRAASAYLQSAAILV RNES FVGFWERLRIKLAALRSRWCDCF R+   F  
Sbjct: 61  TIRNELVKRAASAYLQSAAILVGRNESCFVGFWERLRIKLAALRSRWCDCFPRFFGFFRF 120

Query: 121 VY 123
           V+
Sbjct: 121 VF 122

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BLAST of CsaV3_6G051900 vs. ExPASy Swiss-Prot
Match: Q7XIZ1 (Glutaredoxin-C9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC9 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.1e-32
Identity = 71/106 (66.98%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 175 FEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHH 234
           +E V ++A  NAVVVFS SGCCMC VVKRLL GLGVGP V ELD L+  +A DIQA L  
Sbjct: 89  YERVARMASGNAVVVFSASGCCMCHVVKRLLLGLGVGPAVYELDQLA--AAADIQAALSQ 148

Query: 235 LLPHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
           LLP    P+P VFVGG+ LGG+E +M+ HING+LVPLLKQAGALWL
Sbjct: 149 LLPPGQPPVPVVFVGGRLLGGVEKVMACHINGTLVPLLKQAGALWL 192

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BLAST of CsaV3_6G051900 vs. ExPASy Swiss-Prot
Match: Q96305 (Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 3.0e-23
Identity = 58/107 (54.21%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 178 VRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHLL- 237
           +  LA  +AVV+FS+S CCMC  VK L  G+GV P V ELD   HP   DIQ  L  LL 
Sbjct: 32  IESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELD--LHPYGGDIQRALIRLLG 91

Query: 238 ---PHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
                 P  +P VF+GGK +G ++ +M+SHINGSLVPLLK AGALWL
Sbjct: 92  CSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136

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BLAST of CsaV3_6G051900 vs. ExPASy Swiss-Prot
Match: Q6K609 (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-22
Identity = 56/109 (51.38%), Postives = 74/109 (67.89%), Query Frame = 0


Query: 178 VRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHLLP 237
           V +LA  +AVVVFS+S CCMC  VKRL  G+GV PTV ELD    P   +++  L  L+ 
Sbjct: 29  VERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPTVHELD--LDPRGRELERALARLVG 88

Query: 238 H------QPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
           +       P  +P VF+GGK +G ++ +M++HINGSLVPLLK+AGALWL
Sbjct: 89  YGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGALWL 135

[Close]

BLAST of CsaV3_6G051900 vs. ExPASy Swiss-Prot
Match: Q8LF89 (Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 3.4e-22
Identity = 57/109 (52.29%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 178 VRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHLL- 237
           +  +A  NAVV+FS+S CCMC  +KRL  G+GV P V ELD L  P   +I   L  LL 
Sbjct: 34  IESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLL--PYGVEIHRALLRLLG 93

Query: 238 -----PHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
                   P  +P VF+GGK +G +E +M+SHINGSLVPLLK AGALWL
Sbjct: 94  CSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of CsaV3_6G051900 vs. ExPASy Swiss-Prot
Match: Q0JDM4 (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 9.8e-22
Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 176 EVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHL 235
           E V +LA  +AVVVFS+S CCMC  VKRL  G+GV P V ELD    P   D++  L  L
Sbjct: 30  ERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAVHELD--LDPRGRDLERALARL 89

Query: 236 L---PHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
           +         +P VF+GGK +G ++ +M++HINGSLVPLLK+AGALWL
Sbjct: 90  VGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGALWL 135

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BLAST of CsaV3_6G051900 vs. ExPASy TrEMBL
Match: A0A0A0KI63 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G524040 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 2.6e-57
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 169 VANHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDI 228
           +ANHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDI
Sbjct: 5   LANHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDI 64

Query: 229 QAVLHHLLPHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
           QAVLHHLLPHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL
Sbjct: 65  QAVLHHLLPHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 116

[Close]

BLAST of CsaV3_6G051900 vs. ExPASy TrEMBL
Match: A0A0A0KKP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524030 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.1e-55
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MEDPHRLQNIPSFKLSRYSSSARDSDASDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI 60
           MEDPHRLQNIPSFKLSRYSSSARDSDASDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI
Sbjct: 9   MEDPHRLQNIPSFKLSRYSSSARDSDASDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI 68

Query: 61  SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHR 114
           SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHR
Sbjct: 69  SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHR 121

[Close]

BLAST of CsaV3_6G051900 vs. ExPASy TrEMBL
Match: A0A6J1EDM5 (glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111433239 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.0e-53
Identity = 105/107 (98.13%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 174 PFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLH 233
           P+EVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLH
Sbjct: 8   PYEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLH 67

Query: 234 HLLPHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
           HLLPHQPHPIPAVFVGGKFLGGL+TLMSSHINGSLVPLLKQAGALWL
Sbjct: 68  HLLPHQPHPIPAVFVGGKFLGGLDTLMSSHINGSLVPLLKQAGALWL 114

[Close]

BLAST of CsaV3_6G051900 vs. ExPASy TrEMBL
Match: A0A5A7UBK0 (Putative E3 ubiquitin-protein ligase arkadia-A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001310 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-53
Identity = 110/113 (97.35%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MEDPHRLQNIPSFKLSRYSSSARDSDASDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI 60
           MED H+LQNIPSFKLSRYSSSARDSDA DDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI
Sbjct: 7   MEDSHKLQNIPSFKLSRYSSSARDSDAGDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI 66

Query: 61  SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHR 114
           SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHR
Sbjct: 67  SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHR 119

[Close]

BLAST of CsaV3_6G051900 vs. ExPASy TrEMBL
Match: A0A6J1EJR7 (uncharacterized protein LOC111433238 OS=Cucurbita moschata OX=3662 GN=LOC111433238 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 3.3e-49
Identity = 103/122 (84.43%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MEDPHRLQNIPSFKLSRYSSSARDSDASDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNI 60
           M+DPH+LQN+PSFKLSRYSS+ RDSDA DDLRYTSLKDILLNSPSYSGVN+FNEFN SNI
Sbjct: 10  MDDPHKLQNLPSFKLSRYSSTVRDSDAGDDLRYTSLKDILLNSPSYSGVNEFNEFNLSNI 69

Query: 61  SIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHRWRLIFSE 120
           +IRNELVKRAASAYLQSAAILV RNES FVGFWERLRIKLAALRSRWCDCF R+   F  
Sbjct: 70  TIRNELVKRAASAYLQSAAILVGRNESCFVGFWERLRIKLAALRSRWCDCFPRFFGFFRF 129

Query: 121 VY 123
           V+
Sbjct: 130 VF 131

[Close]

BLAST of CsaV3_6G051900 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 2.2e-24
Identity = 58/107 (54.21%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 178 VRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHLL- 237
           +  LA  +AVV+FS+S CCMC  VK L  G+GV P V ELD   HP   DIQ  L  LL 
Sbjct: 32  IESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELD--LHPYGGDIQRALIRLLG 91

Query: 238 ---PHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
                 P  +P VF+GGK +G ++ +M+SHINGSLVPLLK AGALWL
Sbjct: 92  CSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136

[Close]

BLAST of CsaV3_6G051900 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-23
Identity = 57/109 (52.29%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 178 VRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHLL- 237
           +  +A  NAVV+FS+S CCMC  +KRL  G+GV P V ELD L  P   +I   L  LL 
Sbjct: 34  IESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLL--PYGVEIHRALLRLLG 93

Query: 238 -----PHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
                   P  +P VF+GGK +G +E +M+SHINGSLVPLLK AGALWL
Sbjct: 94  CSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of CsaV3_6G051900 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 6.5e-21
Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 176 EVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHL 235
           E VR + E NAV+V    GCCMC VV+RLL GLGV P V+E+D       D++ + L ++
Sbjct: 33  ERVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEID---EEREDEVLSELENI 92

Query: 236 LPH---QPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
                     +PAV+VGG+  GGL+ +M++HI+G LVP+LK+ GALWL
Sbjct: 93  GVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of CsaV3_6G051900 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein )

HSP 1 Score: 92.0 bits (227), Expect = 7.9e-19
Identity = 47/96 (48.96%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 185 NAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHLLPHQPHPIP 244
           NAVVVF+  GCC+  V KRLL   GV P VVE+    + + D+I +            +P
Sbjct: 63  NAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDNNNYDNIVS--------DKEKLP 122

Query: 245 AVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
            +++GGK  GGLE LM++HING LVP L+QAGALWL
Sbjct: 123 MMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALWL 150

[Close]

BLAST of CsaV3_6G051900 vs. TAIR 10
Match: AT3G21460.1 (Glutaredoxin family protein )

HSP 1 Score: 92.0 bits (227), Expect = 7.9e-19
Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 0


Query: 176 EVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQAVLHHL 235
           +VV +LA   AVV+FS S CCM   +KRL +  GV P +VE+D   +    DI+  L  L
Sbjct: 2   DVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMY--GKDIEWALARL 61

Query: 236 LPHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 281
                  +PAVFVGGKF+G   T+M+ H+NGSL  LLK+AGALWL
Sbjct: 62  --GCSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

The following BLAST results are available for this feature:

BLAST of CsaV3_6G051900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647751.1	2.0e-157	100.00	hypothetical protein Csa_003767 [Cucumis sativus]	[more]
XP_022925986.1	2.1e-53	98.13	glutaredoxin-C9-like [Cucurbita moschata] >XP_023543935.1 glutaredoxin-C9-like [...	[more]
KAA0052530.1	3.5e-53	97.35	putative E3 ubiquitin-protein ligase arkadia-A [Cucumis melo var. makuwa]	[more]
XP_022925985.1	6.9e-49	84.43	uncharacterized protein LOC111433238 [Cucurbita moschata] >KAG6581442.1 hypothet...	[more]
KAG7034735.1	6.9e-49	84.43	hypothetical protein SDJN02_04465, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsaV3_6G051900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XIZ1	6.1e-32	66.98	Glutaredoxin-C9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC9 PE=3 SV=1	[more]
Q96305	3.0e-23	54.21	Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2	[more]
Q6K609	1.2e-22	51.38	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1	[more]
Q8LF89	3.4e-22	52.29	Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2	[more]
Q0JDM4	9.8e-22	51.85	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2	[more]

BLAST of CsaV3_6G051900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI63	2.6e-57	99.11	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G52404...	[more]
A0A0A0KKP9	3.1e-55	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524030 PE=4 SV=1	[more]
A0A6J1EDM5	1.0e-53	98.13	glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111433239 PE=3 SV=1	[more]
A0A5A7UBK0	1.7e-53	97.35	Putative E3 ubiquitin-protein ligase arkadia-A OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1EJR7	3.3e-49	84.43	uncharacterized protein LOC111433238 OS=Cucurbita moschata OX=3662 GN=LOC1114332...	[more]

BLAST of CsaV3_6G051900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02000.1	2.2e-24	54.21	Thioredoxin superfamily protein	[more]
AT5G14070.1	2.4e-23	52.29	Thioredoxin superfamily protein	[more]
AT1G28480.1	6.5e-21	47.22	Thioredoxin superfamily protein	[more]
AT1G03850.2	7.9e-19	48.96	Glutaredoxin family protein	[more]
AT3G21460.1	7.9e-19	49.52	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 178..280 e-value: 2.3E-34 score: 115.3
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 165..280
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 187..252 e-value: 1.5E-7 score: 31.5
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 170..279 e-value: 1.7E-24 score: 87.6
None	No IPR available	PANTHER	PTHR10168:SF222	GLUTAREDOXIN-C9	coord: 165..280
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 175..279 score: 20.175875
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 186..271 e-value: 6.4511E-28 score: 101.077
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 175..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G051900.1	CsaV3_6G051900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity