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CsaV3_6G051710 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTCTAATTAACACCAGTTATGGAATAATTTTTTCATCCAATAACCTAATACACTAACTTTAATTAGAACCTATATAGTTTGACATTATTTATTTTTGTTTAGGGTATATGTATGTATATATATAGAACATGGTTGACCCATTAAACAGGGGACCAAATTACAACATTAAACTCATTTCTCAACAACAAATAATATAAATTAGAAACCCCCATCCATCTCTACATATACATCATTCATTATATATCCACACCTCCCTCGAATAACATCTCCTCTTTCTTTCTCATTCTCCATTAAAAATTTGGCTCTCTCGTACCATTTTTGCACACAAAATGAAACTTACTCATCACCGTAACATCCAAATTAAAACCCTTTTGATTTCTCTTTCTCAAAAGTGAAAAATGGGTTTCAAGATTCCCTCTTCATTCTCATCACCAAATTACCTTTGTTTCTTTCAAATCTCTCTCTCTCTTATTCTCTTCTTCCTCCTAACTCCCACCACCTCTTCCTTTAAACCCCTTCCCGGCCATGAACCAAGCAACGTCCGCCACCGTACCACCGTTGTCCATGGCAGCGCAATCACCACACTACGGCGAGAAGTAGATCATCCTCATCATCATCATCATGAATACAGAAGCAACAAATTAGAAATGGAGATCAAAATTAACAAGATAAGCAAGAAGATGATCAAAAGGAAGGTTGTAGTACTCCCGGGCGGGTTTAAAAGCAGTAATCATAAAAATAAAAACGATAAAGGAAGTGCTTTCTCTGCAATGCTTCCAAAGGGATTTGTTCCTCCTTCTGGTTCTTCCCCTTGTCATAACGAAGACCCTCAATCTTCATCTCTTGCTTTTTACTGCCATCTTGATCGCCCTTGATTATTAATCTGCCTCTTTTATCCATTTGGGCATTCTTTTTCAGGTGGGTTTCAGCTAAGTTTCTTGCTTTTGTTTTTTTATTCTATTATAAAATCTCCCCCTTCTTGAAATTGTGACAAATTAAACAGTGTAATATGGTCTCCATATATAAATATATAGAAGAAAAAAAGGAAAACCATTACTCTTCTCTTCTTCTCTCTCTTTTTGTATATTATTTAGAATGTAATTGTTTACAACATAGAAATTTAGGAATTCGAAAAGTTATTTTCTTGGATTAACTATAAGCTGTCTCTCCAGATTTGTAGATAAAAACAAGTTATTTA ATGGGTTTCAAGATTCCCTCTTCATTCTCATCACCAAATTACCTTTGTTTCTTTCAAATCTCTCTCTCTCTTATTCTCTTCTTCCTCCTAACTCCCACCACCTCTTCCTTTAAACCCCTTCCCGGCCATGAACCAAGCAACGTCCGCCACCGTACCACCGTTGTCCATGGCAGCGCAATCACCACACTACGGCGAGAAGTAGATCATCCTCATCATCATCATCATGAATACAGAAGCAACAAATTAGAAATGGAGATCAAAATTAACAAGATAAGCAAGAAGATGATCAAAAGGAAGGTTGTAGTACTCCCGGGCGGGTTTAAAAGCAGTAATCATAAAAATAAAAACGATAAAGGAAGTGCTTTCTCTGCAATGCTTCCAAAGGGATTTGTTCCTCCTTCTGGTTCTTCCCCTTGTCATAACGAAGACCCTCAATCTTCATCTCTTGCTTTTTACTGCCATCTTGATCGCCCTTGA ATGGGTTTCAAGATTCCCTCTTCATTCTCATCACCAAATTACCTTTGTTTCTTTCAAATCTCTCTCTCTCTTATTCTCTTCTTCCTCCTAACTCCCACCACCTCTTCCTTTAAACCCCTTCCCGGCCATGAACCAAGCAACGTCCGCCACCGTACCACCGTTGTCCATGGCAGCGCAATCACCACACTACGGCGAGAAGTAGATCATCCTCATCATCATCATCATGAATACAGAAGCAACAAATTAGAAATGGAGATCAAAATTAACAAGATAAGCAAGAAGATGATCAAAAGGAAGGTTGTAGTACTCCCGGGCGGGTTTAAAAGCAGTAATCATAAAAATAAAAACGATAAAGGAAGTGCTTTCTCTGCAATGCTTCCAAAGGGATTTGTTCCTCCTTCTGGTTCTTCCCCTTGTCATAACGAAGACCCTCAATCTTCATCTCTTGCTTTTTACTGCCATCTTGATCGCCCTTGA MGFKIPSSFSSPNYLCFFQISLSLILFFLLTPTTSSFKPLPGHEPSNVRHRTTVVHGSAITTLRREVDHPHHHHHEYRSNKLEMEIKINKISKKMIKRKVVVLPGGFKSSNHKNKNDKGSAFSAMLPKGFVPPSGSSPCHNEDPQSSSLAFYCHLDRP* Homology
BLAST of CsaV3_6G051710 vs. NCBI nr
Match: KGN49393.1 (hypothetical protein Csa_004373 [Cucumis sativus]) HSP 1 Score: 323.6 bits (828), Expect = 9.9e-85 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
BLAST of CsaV3_6G051710 vs. NCBI nr
Match: KAA0052545.1 (hypothetical protein E6C27_scaffold120G001480 [Cucumis melo var. makuwa] >TYK13280.1 hypothetical protein E5676_scaffold255G008990 [Cucumis melo var. makuwa]) HSP 1 Score: 246.1 bits (627), Expect = 2.0e-61 Identity = 136/163 (83.44%), Postives = 141/163 (86.50%), Query Frame = 0
BLAST of CsaV3_6G051710 vs. NCBI nr
Match: KAG6581427.1 (hypothetical protein SDJN03_21429, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126.3 bits (316), Expect = 2.3e-25 Identity = 81/160 (50.62%), Postives = 98/160 (61.25%), Query Frame = 0
BLAST of CsaV3_6G051710 vs. NCBI nr
Match: KAG7026467.1 (hypothetical protein SDJN02_10467, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 108.2 bits (269), Expect = 6.5e-20 Identity = 73/158 (46.20%), Postives = 90/158 (56.96%), Query Frame = 0
BLAST of CsaV3_6G051710 vs. NCBI nr
Match: KAG6594469.1 (hypothetical protein SDJN03_11022, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 103.2 bits (256), Expect = 2.1e-18 Identity = 72/158 (45.57%), Postives = 88/158 (55.70%), Query Frame = 0
BLAST of CsaV3_6G051710 vs. ExPASy TrEMBL
Match: A0A0A0KIK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523350 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 4.8e-85 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
BLAST of CsaV3_6G051710 vs. ExPASy TrEMBL
Match: A0A5A7UFQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008990 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 9.7e-62 Identity = 136/163 (83.44%), Postives = 141/163 (86.50%), Query Frame = 0
BLAST of CsaV3_6G051710 vs. ExPASy TrEMBL
Match: A0A444WWS8 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g100459 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 5.6e-09 Identity = 49/140 (35.00%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of CsaV3_6G051710 vs. ExPASy TrEMBL
Match: K7M133 (Uncharacterized protein OS=Glycine max OX=3847 GN=102664871 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 3.6e-08 Identity = 49/142 (34.51%), Postives = 68/142 (47.89%), Query Frame = 0
BLAST of CsaV3_6G051710 vs. ExPASy TrEMBL
Match: A0A445I8K3 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_031414 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 3.6e-08 Identity = 49/142 (34.51%), Postives = 68/142 (47.89%), Query Frame = 0
BLAST of CsaV3_6G051710 vs. TAIR 10
Match: AT4G18335.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 4.7e-08 Identity = 42/147 (28.57%), Postives = 69/147 (46.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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