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CsaV3_6G051330 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAATATCTTAACAAGGGCTAACTCAAAAATTACAAATGAGAAACTTTTCTCTTTAAAATACATAAATTAATGGGAGGGAATGAAGGAATGAAAATGAATACAAAGTTTTCATTTTGATTATTTTGATTTGATTTAAATGATGCAAAGCTCACCTACCCAACCAAAGCATAGGGGTAAAGATCGAATCTTTTTTCCGTTTGTGATATTTAATATTGGGAGAAATGAGATGAGAAAGGGCATAATATAATACTAATAGCATAGGGATTGGGAATCTCAATTGGCGCCTCAGCAAATTTAGTGAGTGAGTGAACCTCCAATCGTCATCCCCACCTGTCCTTTCCTCTGCCACATCCTTTTTCTTTTTCCTTTTTTTTTCTTCTTTTTATTCTTATAACGCACCACATCACAATTTTTTTTCTCTCATTCAAAGAATTCTGAGGCTGCGGAGCCTCCAAGTTTCTGTTCCCTTCCATTTCTTTTTGTTCATCATGCCCTCAGGCGCTAAGAAACGTAAAGCTGCCAAGAAAAAGAAGGAATTGGAAGCTCATATCAACCCTTCTCAAGGTACAATTCTCATATTCGTACCCCCTTTTTTCAAATTTTTAACCCCATGTTTTCATTTGTTTCATATGGGTCCCTTCTTCTGCTTCTGATTCAATCCCTCCTTCAGTTGCTGTGTATGTAAATGTAATGTAATTTCTCAAGTGGGTTTTGCCACTTGTGTCTTCTTCTTGCTTTTGAGATCTGATTATGTTAGATTTGATTTGGTTTTGTTTTGAATCCTTGTGATTAGAATCTGTGCACCTCTTATTTCTTGTTTGTTATTGTGTTAACCAAATTAGCTTTGTCGGTAGATTTAAATTTCAGCTGTTCTTTTTTGCGAACCTGTTTTTTAATTTTAATTTTCCCCCCTTGGGACGCTTCAGTCCAAAGTAAGAGTCTTTTTTAATTGTTTAATTGAATTAATCTCGCTTCTCTGTTGATCAATCGCAATTTTCAATTTTTTTCCTCTGTTTTGGATTCTGGTTGAAATTGGTGCGTCAAGTCTCACCCTACTCATCATCCACCTTCATCAGCTTTCTTTTACTTTTGGGTTCGAGTTTCTGTTACTGATTCGTTTAGAAAGCTGATTCTTGGGGTATTTTTAACTTCAAGTTCTTTGATTGTTTTGGAGAGAAGGATTTGACTTGAGGTAGATTGCATGAGTTGTTTCATTACAATTTAGAGATAACTTTACCCTCTTTTCCATCTGGGGAGTGGGAATTACATATTTCTCTTTTGAGTTCTTCTGATTATAATTTTTCATGACAGGAAAGGATGATGCTAAGAACCAAGATGATAAGGGAAGTGATAGTGGTGAGATCGATTCCCCAGCTTCTCAGAATCACCCAAGCCACAGCAATCCATTTGGTGAGGGAAATAAAGAAATACAAGAGAGCAGCTCGTCAGACGCTGGGGTCCCGAGCAATGTAGGGACTAATCAGAAAGTTAAACTTTCTTCTGAGAGAAAAAATGGAAATGTTGAGAATGAGTCTGTGAAAGGATCACGTGATGATGACCATAGCAGTAGTAGTTCAGATGATGAATCTGTAGATACAACAAAGAAACCAGAGGTATGTCATCCAGTTTCTAAAATGAAATTGCGACATCTTTTTGTCAGCAAGATTAATTTGCAACTCTGAAAATTTATAAGGTGGATGGATAGGTACTGGATGGGAAGACCGATGATTTGGTTGTGCCAACTGCTGCCTCTATTCTTAACTCGATTACACCAGAGCTCTCGGCATCTGAGGAAACTATCAGTATTGCTGAAAGTGCATCTGTTGAAAATACTGCCATACCTGATATGATTGTTTCGAAAAAGTTAGAGACAACCCCCTTCCACTCAGCAGATGGAGTTACAAATGTGCCAGTGGAAGCTCCAAGGGATCCATCATCAAAACCAAATGAGGATAGAAATTTACACATATCAGGTGAATCTGTTGAATAAGGGCTCTTCTTCTTCTGATGTTTTGAATTCACATCTGGAAAATATTACTGCCACTGTTGGTAATTGGTATGACTGGACTAATAATTTTGCAGCACATGTCGAAAATTCTGAATGTGCAGAAAACTCCAAACCTGAATCTGAAGATCAGGTTTTTTTCCAATCTCTTGTTATTGCTGAACATACTTGCATATCATATGTTTATTCTTCCTTGAGAAACGAGGCTTTTGTATTCCAATTTCTGTGCAGCCGTTGATTGGGTCAAGACCACCAGTGCCACAAAGGTCCTCATGGTTAAGTTGCTGTGGATTATGTGATGTATTTACCAGCTCGGACCGATAACTACAGTTTCTATATATAGGGTTAGAACCTAACCTTTTTGTTTATCAACTTTTACCTTGTCCAATATTTGGTGCTGCTCATATCATAAAGTTGCTTGCAGATGAAAATTTAATTGTTGTGAAAGAAGAATTTTATTTTAATGTGAATAGCTTGTCGAAGCCCATAATCTACAGAATATTCCCATTTACTAATATGTGTATGTGTACAAGGGGTTGTGTGAGATTCATCTTTATATATCTGAATGGAGACTCGGTATTCATATTTCATATTCCATCCTTGATGAACAATTATTCCTCTTTCATGAGATATGGTTTGTGTTTTTGATAAGAAAAGTATTGTAAAGATCAACTATTCTTAAACTTCATTCATCCCAAGTCTCCGATCATATACTTTTTTCCTTTTCCCCCTAAAAGAGGTATTGAACTTTACAGCCCTTAGGTCTTTGTGGTTCCTTTATGACATATGCTTTGTATTTGATATTGGAATCGACTTAGTATGCTTACACTGTCAAATCTGCATTTGAATAGACGCCTACATTGTCAAATTTGCATTTGAACTTACATACACACTATGTCAATGGCTTCTTTTCTAGAACAATATAATCCAAAATCTAGTTGGCAGTTGGCACTGGCACTGAGATCATGTGTTTTATGTTGAGGCAGGAATGAAAATTCTTCACAGGAGGGGTGAAGGTTTAAACAGCAAGTGTCTGTACGAGCACATGATAGGATAGTCATCGAACTTGATGAGCCCAGCCTAAGGTAGATCATATTCTTGGATTTAGAAGCTAGCAAACATGAAGATATTCCCTTACTACATGTCTTTTGTCCTACAGTGAGTTTTTGTTCTTTGGAGCATGATGTTCTCGATTTTGTATTAGTCTTACATTTTACAATTATATTATCATAAATGTTTTGATTGTGTCGATAATCAGTTATCACTTTTTACTTTCATATTCATATGATGGCATCTGCTATTGCTTGGCTGAATGAGTTCTCTGTCTCAACTTATGCAATGCTTTCCCATCCCTCGTACATGGTTTATTCTTTTGGTGAAAACCTTGGACATAAACTTCGTTTTCTACTGATATTGGCATTTTTTTTTTTACCATTTTATGTTAGTTTACGTGGTACTTAGTCTTGGAATTTTTATGTGCATGCTGTTGAAGCTGTTACGGAGGAAATGAAGTCATCAAAGTCACTGAAATCTTATTCTTTTTTTTTGCACACCAATTTTCATAATATCTTCTGTACTTCATCTGCCAATACAATGCAAGTTTCTCCCATTTTACATGATTCGACCAAGATTGATTTAAGAAAACAAATCATATATAAAAAAAATTGAAAACAAACCCACAAACAAACATTCGGTGAACGCTATTTCTAGAATCTACTGGCTGGTTGAGATCCACACAATGATTGCGGTATAAACAAATTGCGTAATTGAAAGGACAATCACGAAAGCCTCCAATGCAATCTGCATTTTTAAAAACACACGAAAAGACTCAAACCTTGGCTTTGTAGTTTACATTACTCTGTGAAGCACTTTTGAAGAACTGAAGCAAAATTTACTAGAAGGGAAAAATAAGAGAGAGAAACAAGAGAAGCGTTTAGGTTC ATGCCCTCAGGCGCTAAGAAACGTAAAGCTGCCAAGAAAAAGAAGGAATTGGAAGCTCATATCAACCCTTCTCAAGGAAAGGATGATGCTAAGAACCAAGATGATAAGGGAAGTGATAGTGGTGAGATCGATTCCCCAGCTTCTCAGAATCACCCAAGCCACAGCAATCCATTTGGTGAGGGAAATAAAGAAATACAAGAGAGCAGCTCGTCAGACGCTGGGGTCCCGAGCAATGTAGGGACTAATCAGAAAGTTAAACTTTCTTCTGAGAGAAAAAATGGAAATGTTGAGAATGAGTCTGTGAAAGGATCACGTGATGATGACCATAGCAGTAGTAGTTCAGATGATGAATCTGTAGATACAACAAAGAAACCAGAGGTACTGGATGGGAAGACCGATGATTTGGTTGTGCCAACTGCTGCCTCTATTCTTAACTCGATTACACCAGAGCTCTCGGCATCTGAGGAAACTATCAGTATTGCTGAAAGTGCATCTGTTGAAAATACTGCCATACCTGATATGATTGTTTCGAAAAAGTTAGAGACAACCCCCTTCCACTCAGCAGATGGAGTTACAAATGTGCCAGTGGAAGCTCCAAGGGATCCATCATCAAAACCAAATGAGGATAGAAATTTACACATATCAGAAAACTCCAAACCTGAATCTGAAGATCAGCCGTTGATTGGGTCAAGACCACCAGTGCCACAAAGGTCCTCATGGTTAAGTTGCTGTGGATTATGTGATGTATTTACCAGCTCGGACCGATAA ATGCCCTCAGGCGCTAAGAAACGTAAAGCTGCCAAGAAAAAGAAGGAATTGGAAGCTCATATCAACCCTTCTCAAGGAAAGGATGATGCTAAGAACCAAGATGATAAGGGAAGTGATAGTGGTGAGATCGATTCCCCAGCTTCTCAGAATCACCCAAGCCACAGCAATCCATTTGGTGAGGGAAATAAAGAAATACAAGAGAGCAGCTCGTCAGACGCTGGGGTCCCGAGCAATGTAGGGACTAATCAGAAAGTTAAACTTTCTTCTGAGAGAAAAAATGGAAATGTTGAGAATGAGTCTGTGAAAGGATCACGTGATGATGACCATAGCAGTAGTAGTTCAGATGATGAATCTGTAGATACAACAAAGAAACCAGAGGTACTGGATGGGAAGACCGATGATTTGGTTGTGCCAACTGCTGCCTCTATTCTTAACTCGATTACACCAGAGCTCTCGGCATCTGAGGAAACTATCAGTATTGCTGAAAGTGCATCTGTTGAAAATACTGCCATACCTGATATGATTGTTTCGAAAAAGTTAGAGACAACCCCCTTCCACTCAGCAGATGGAGTTACAAATGTGCCAGTGGAAGCTCCAAGGGATCCATCATCAAAACCAAATGAGGATAGAAATTTACACATATCAGAAAACTCCAAACCTGAATCTGAAGATCAGCCGTTGATTGGGTCAAGACCACCAGTGCCACAAAGGTCCTCATGGTTAAGTTGCTGTGGATTATGTGATGTATTTACCAGCTCGGACCGATAA MPSGAKKRKAAKKKKELEAHINPSQGKDDAKNQDDKGSDSGEIDSPASQNHPSHSNPFGEGNKEIQESSSSDAGVPSNVGTNQKVKLSSERKNGNVENESVKGSRDDDHSSSSSDDESVDTTKKPEVLDGKTDDLVVPTAASILNSITPELSASEETISIAESASVENTAIPDMIVSKKLETTPFHSADGVTNVPVEAPRDPSSKPNEDRNLHISENSKPESEDQPLIGSRPPVPQRSSWLSCCGLCDVFTSSDR* Homology
BLAST of CsaV3_6G051330 vs. NCBI nr
Match: XP_011658271.1 (uncharacterized protein LOC101202888 isoform X2 [Cucumis sativus] >KAE8647734.1 hypothetical protein Csa_003274 [Cucumis sativus]) HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. NCBI nr
Match: XP_004134611.1 (uncharacterized protein LOC101202888 isoform X1 [Cucumis sativus]) HSP 1 Score: 465.7 bits (1197), Expect = 2.6e-127 Identity = 255/264 (96.59%), Postives = 255/264 (96.59%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. NCBI nr
Match: TYK13245.1 (uncharacterized protein E5676_scaffold255G008630 [Cucumis melo var. makuwa]) HSP 1 Score: 438.7 bits (1127), Expect = 3.4e-119 Identity = 242/264 (91.67%), Postives = 248/264 (93.94%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. NCBI nr
Match: XP_008439686.1 (PREDICTED: uncharacterized protein LOC103484406 [Cucumis melo]) HSP 1 Score: 438.3 bits (1126), Expect = 4.4e-119 Identity = 242/264 (91.67%), Postives = 248/264 (93.94%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. NCBI nr
Match: XP_038882131.1 (uncharacterized protein LOC120073379 [Benincasa hispida]) HSP 1 Score: 413.7 bits (1062), Expect = 1.2e-111 Identity = 232/270 (85.93%), Postives = 242/270 (89.63%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. ExPASy TrEMBL
Match: A0A0A0KHZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G521020 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.3e-127 Identity = 255/264 (96.59%), Postives = 255/264 (96.59%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. ExPASy TrEMBL
Match: A0A5D3CNT1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008630 PE=4 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 1.6e-119 Identity = 242/264 (91.67%), Postives = 248/264 (93.94%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. ExPASy TrEMBL
Match: A0A1S3AZC5 (uncharacterized protein LOC103484406 OS=Cucumis melo OX=3656 GN=LOC103484406 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.1e-119 Identity = 242/264 (91.67%), Postives = 248/264 (93.94%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. ExPASy TrEMBL
Match: A0A6J1CKC0 (uncharacterized protein LOC111012397 OS=Momordica charantia OX=3673 GN=LOC111012397 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.8e-87 Identity = 199/269 (73.98%), Postives = 218/269 (81.04%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. ExPASy TrEMBL
Match: A0A6J1ECK7 (nucleolin 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433088 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 4.5e-77 Identity = 179/267 (67.04%), Postives = 202/267 (75.66%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. TAIR 10
Match: AT1G29530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34310.3); Has 84 Blast hits to 78 proteins in 24 species: Archae - 2; Bacteria - 4; Metazoa - 9; Fungi - 8; Plants - 55; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 73.6 bits (179), Expect = 2.7e-13 Identity = 82/257 (31.91%), Postives = 125/257 (48.64%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. TAIR 10
Match: AT4G18070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 7.8e-05 Identity = 72/291 (24.74%), Postives = 117/291 (40.21%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. TAIR 10
Match: AT4G18070.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 7.8e-05 Identity = 72/291 (24.74%), Postives = 117/291 (40.21%), Query Frame = 0
BLAST of CsaV3_6G051330 vs. TAIR 10
Match: AT4G18070.4 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 7.8e-05 Identity = 72/291 (24.74%), Postives = 117/291 (40.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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