CsaV3_6G051260 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G051260
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 29840375 .. 29842241 (+)
RNA-Seq ExpressionCsaV3_6G051260
SyntenyCsaV3_6G051260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGTTCAAATCACCAAGTATTACTGCCTCATTTCATACATTGTAGTTGTAATTGCAATGATGGGTGAGCCATGCTGGGGAGGCTCCAAAACTATGGCGCCCTTGAGTCGATGGAAGGTGGTGATTTTTAGCCAATTGAATCCAGGCGAGAATTTATTAGTTCATTGTAAATCAAAAGACAACGATTTGGGCGAACATTCGTTGCAAGTGAGTCAGAATTTTTCATGGAAATTCAAAGAAAACTTGTTTTCTACAACACTGTTTTGGTGTACTCTAACAACTTCATCGAAGAAAAAAGTAACAATGGATGTGTTTTGGCCAGAGAGACACAATTGGCTTGCTATTCGATGCAGTTACAGAACTTGTATTTGGGTTGCTCAAGATGATGGTATTTATTTAGTCAACAAGAATGCAAGGGAATTTGTGCGTAAATGGGACAGTTAATTTAATAGCCCTTTTAAAAGTAATTTTAAAATAACTTTTATACATATAAAATGTAATTTCCATATATGTCAATCTCCACCTTATTATTAATAAATAAATTAACAAAATATATGTTTGACTCTAAAAGTTGTATAGTATGATGTGAATGAAATTAAAGTATGATACTAAAATAGAGTAATTAAGAATGAGTAGAAAGTTTAGACGGTGGAAACGACACTTTTGTATTAATTAAATCCTAATTTTAATAATGAAACGTGACAAAAATTAGATCATAGGATAAAAAGGGAATATACCATAGAGAATGGAAGAAAAAGGAATAAAATATTTGTTAATTAGGTTAATTAATTAAAATTAATAATATATTAACGGTGTAATTAAAAAAGGAGTAAACGTTTAGAGAGACGGTGGTAAGAATGAATGCGTAAAAACCTTACAGCTGTAAATCACTGGAGAGTCAACACCAATTGCAATTCAAGAATTCCAACAACCTAACTCCTCCATAAACCCTAGACTTATCATCCCTTCCCCTTCCCTCTCCTTCTTCCCGCGCTTGTTCTCTTCGAGGGGGGCTCTTCGCCCTCTCTTCGATGCTTTCATCTTACCCCTCCTCCATCTCTTCAATCTCCACTCTTCCGCTGCTGCTGCTGCTCTCTACTCGATTTTGGTAATTTCCTCTTCTTTCTCCCTACTAACTCTTCTCTCCCGCCGCCGGCTTTTTGGCGGCTTCGGGTTTCCTTCAACTTCCTTTCCTTTATAGGGTTTTATGCTTTTTTCTGGAACTTTGTTGTCTATTGATTTCAATTTAATCGATTTGAGTTAATTTATGTTGTTCCTCTGTTCCTTGTTTGTTTTCCATCCTCTGTTTTATTGTTTCTTATCGCTTCGAGATTTCGAGATCACGAAACTAGGGTTTGCTTATACTTCTGTAAATTTTGCTTGAGTTTGTTTAATTCTTCTTGATCTTTGATCTTTTGCTATTTTCTTTTCGTGATCTTTCAACTTTTATGTTGACGGTAGTTCCGAGATACGTCCTGTGGATTCTGAATTTTGCTTTATGTTTTTAGTTTCAGCTCGTTTCGTTCCCAATAGAAACTCTTCCTTGTTCTCACTACGCAATTTCAAGTGCTTATGTTTCGAGAGCGCGTTTTTTTTTTTTGTGAGGACATGTTTTGTTAGTTGCTGATAGCACCACGGGGGCCGTTTTGTTTGGTCCCATGTTGGTGGAATTATGAGATGCTATAATCTCACGTCGTTGGGTTTTTTTTTTTGTAAGTCATTTAGTGGGTTACGGGTCTATTTTAAGACTGAATTTTATTTTCTATACTGGCTTCTGCAGGTTAATTTCGAGATGAGTAGTTCTTACATCCTTCCTTATCTGGTTGAAGAATGCCACTTTTCTGAAGGTCTTGGTCGATTTTGA

mRNA sequence

ATGGGTGTTCAAATCACCAAGTATTACTGCCTCATTTCATACATTGTAGTTGTAATTGCAATGATGGAATTCCAACAACCTAACTCCTCCATAAACCCTAGACTTATCATCCCTTCCCCTTCCCTCTCCTTCTTCCCGCGCTTGTTCTCTTCGAGGGGGGCTCTTCGCCCTCTCTTCGATGCTTTCATCTTACCCCTCCTCCATCTCTTCAATCTCCACTCTTCCGCTGCTGCTGCTGCTCTCTACTCGATTTTGGTTAATTTCGAGATGAGTAGTTCTTACATCCTTCCTTATCTGGTTGAAGAATGCCACTTTTCTGAAGGTCTTGGTCGATTTTGA

Coding sequence (CDS)

ATGGGTGTTCAAATCACCAAGTATTACTGCCTCATTTCATACATTGTAGTTGTAATTGCAATGATGGAATTCCAACAACCTAACTCCTCCATAAACCCTAGACTTATCATCCCTTCCCCTTCCCTCTCCTTCTTCCCGCGCTTGTTCTCTTCGAGGGGGGCTCTTCGCCCTCTCTTCGATGCTTTCATCTTACCCCTCCTCCATCTCTTCAATCTCCACTCTTCCGCTGCTGCTGCTGCTCTCTACTCGATTTTGGTTAATTTCGAGATGAGTAGTTCTTACATCCTTCCTTATCTGGTTGAAGAATGCCACTTTTCTGAAGGTCTTGGTCGATTTTGA

Protein sequence

MGVQITKYYCLISYIVVVIAMMEFQQPNSSINPRLIIPSPSLSFFPRLFSSRGALRPLFDAFILPLLHLFNLHSSAAAAALYSILVNFEMSSSYILPYLVEECHFSEGLGRF*
Homology
[Close]
BLAST of CsaV3_6G051260 vs. NCBI nr
Match: KGN49347.1 (hypothetical protein Csa_003911 [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 2.4e-53
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MGVQITKYYCLISYIVVVIAMMEFQQPNSSINPRLIIPSPSLSFFPRLFSSRGALRPLFD 60
           MGVQITKYYCLISYIVVVIAMMEFQQPNSSINPRLIIPSPSLSFFPRLFSSRGALRPLFD
Sbjct: 1   MGVQITKYYCLISYIVVVIAMMEFQQPNSSINPRLIIPSPSLSFFPRLFSSRGALRPLFD 60

Query: 61  AFILPLLHLFNLHSSAAAAALYSILVNFEMSSSYILPYLVEECHFSEGLGRF 113
           AFILPLLHLFNLHSSAAAAALYSILVNFEMSSSYILPYLVEECHFSEGLGRF
Sbjct: 61  AFILPLLHLFNLHSSAAAAALYSILVNFEMSSSYILPYLVEECHFSEGLGRF 112

[Close]
BLAST of CsaV3_6G051260 vs. ExPASy TrEMBL
Match: A0A0A0KLT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520450 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.2e-53
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MGVQITKYYCLISYIVVVIAMMEFQQPNSSINPRLIIPSPSLSFFPRLFSSRGALRPLFD 60
           MGVQITKYYCLISYIVVVIAMMEFQQPNSSINPRLIIPSPSLSFFPRLFSSRGALRPLFD
Sbjct: 1   MGVQITKYYCLISYIVVVIAMMEFQQPNSSINPRLIIPSPSLSFFPRLFSSRGALRPLFD 60

Query: 61  AFILPLLHLFNLHSSAAAAALYSILVNFEMSSSYILPYLVEECHFSEGLGRF 113
           AFILPLLHLFNLHSSAAAAALYSILVNFEMSSSYILPYLVEECHFSEGLGRF
Sbjct: 61  AFILPLLHLFNLHSSAAAAALYSILVNFEMSSSYILPYLVEECHFSEGLGRF 112

The following BLAST results are available for this feature:
BLAST of CsaV3_6G051260 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49347.12.4e-53100.00hypothetical protein Csa_003911 [Cucumis sativus][more]
BLAST of CsaV3_6G051260 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G051260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLT61.2e-53100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520450 PE=4 SV=1[more]
BLAST of CsaV3_6G051260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G051260.1CsaV3_6G051260.1mRNA