CsaV3_6G050890 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G050890
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	dof zinc finger protein DOF1.5-like
Location	chr6: 29624602 .. 29625795 (-)
RNA-Seq Expression	CsaV3_6G050890
Synteny	CsaV3_6G050890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTTTAAAAGAAAGGGGGAAAAAAAGGCTCATACCCAGTCATTCACTCTTTCCCACCATATCAATTTGACTAATTGGCGTCTGTTTTGTCCCATTGATTCTCATGTTTTACTGCTTTTATAAATTATAAAGCATTTTCTTTTTAAGTACTTTTACCTCCATTATCTCAATTCATATATAAACCCATTTCCCTATATGTCTTCTCTACACAATACACTCTTCCAAAACACACAGAATAATTTAGGGAGGTGGGGGGGAAAAAGTTCCTGTGTGGTCTCTGTTTCTCTCTCTGTTTTTACATATGGCTGAGGTTCATAGTAGCAACACCGATGGAATTAAACTTTTTGGAACTATGATTCATTTACAAACCCGAAAATTGAAGGAGGAACCAGAGAAAGGAGGATCGGTCGCCGGCGGTGGTGAAGGTGATGAAACAGAGATGAAGAGGCCGGAAAAGATTATTCCATGTCCAAGATGTAAGAGTATGGACACCAAATTCTGTTACTTCAACAATTACAATGTTAATCAGCCTAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACGGCCGGTGGGGCGCTCCGTAACGTACCCATCGGAGCTGGTCGTCGAAGAGCCAAGCCGCCGCCTAATTGCCGGACCCTTTCCGGCGAGCTGTCTGAGGATTATGGGCAGTATTACGATGCGGCTTCTGGGATTATTCATCAGCTTGAATTGGATACGGTGGAGGGGTGGCATCTGACGGTGGCGGAACAGGATTTTACCAAAGTTTTTCCTTTCAAACGCCGGAAGATTATCGGTCAACACGGTCAATCGTCTTAACTTCTTCTTCTTCTTTTTTTTTTTTCTTTGATGACTTTATGTGGAAATTAGAGATATAGAGTTTAAATTAATTACTGGAGAGATATGATAATGTAAATACATATTTATCTGTGTGGTTAATCAAGAGCTGATGATCCGATGATTCATATTGGGGGATGGGATATATGGGATTGAGATGATGAGGATTAATTTTCAAATTTGCAAGGTTTCTAAAGTGGGCTATCGAAATTAATGATAATTAATTTGAAAAAAAAATATAGCGTGTGATGCACGGCGGTTGAAATTTCTATCTCTCTTTTTTTGTTTTTTTTAATATAAACATATATATACGTAAAGAAAAGAACGAGAGAGAGAAGATATCAACTCTTTG

mRNA sequence

ATGGCTGAGGTTCATAGTAGCAACACCGATGGAATTAAACTTTTTGGAACTATGATTCATTTACAAACCCGAAAATTGAAGGAGGAACCAGAGAAAGGAGGATCGGTCGCCGGCGGTGGTGAAGGTGATGAAACAGAGATGAAGAGGCCGGAAAAGATTATTCCATGTCCAAGATGTAAGAGTATGGACACCAAATTCTGTTACTTCAACAATTACAATGTTAATCAGCCTAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACGGCCGGTGGGGCGCTCCGTAACGTACCCATCGGAGCTGGTCGTCGAAGAGCCAAGCCGCCGCCTAATTGCCGGACCCTTTCCGGCGAGCTGTCTGAGGATTATGGGCAGTATTACGATGCGGCTTCTGGGATTATTCATCAGCTTGAATTGGATACGGTGGAGGGGTGGCATCTGACGGTGGCGGAACAGGATTTTACCAAAGTTTTTCCTTTCAAACGCCGGAAGATTATCGGTCAACACGGTCAATCGTCTTAA

Coding sequence (CDS)

ATGGCTGAGGTTCATAGTAGCAACACCGATGGAATTAAACTTTTTGGAACTATGATTCATTTACAAACCCGAAAATTGAAGGAGGAACCAGAGAAAGGAGGATCGGTCGCCGGCGGTGGTGAAGGTGATGAAACAGAGATGAAGAGGCCGGAAAAGATTATTCCATGTCCAAGATGTAAGAGTATGGACACCAAATTCTGTTACTTCAACAATTACAATGTTAATCAGCCTAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACGGCCGGTGGGGCGCTCCGTAACGTACCCATCGGAGCTGGTCGTCGAAGAGCCAAGCCGCCGCCTAATTGCCGGACCCTTTCCGGCGAGCTGTCTGAGGATTATGGGCAGTATTACGATGCGGCTTCTGGGATTATTCATCAGCTTGAATTGGATACGGTGGAGGGGTGGCATCTGACGGTGGCGGAACAGGATTTTACCAAAGTTTTTCCTTTCAAACGCCGGAAGATTATCGGTCAACACGGTCAATCGTCTTAA

Protein sequence

MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELSEDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS*

Homology

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BLAST of CsaV3_6G050890 vs. NCBI nr
Match: XP_004134661.2 (cyclic dof factor 4 [Cucumis sativus] >KGN49304.1 hypothetical protein Csa_003239 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 1.2e-99
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK 60
           MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK
Sbjct: 1   MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120

Query: 121 EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS 174
           EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS
Sbjct: 121 EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS 173

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BLAST of CsaV3_6G050890 vs. NCBI nr
Match: XP_008467024.1 (PREDICTED: dof zinc finger protein DOF1.5-like [Cucumis melo] >KAA0052620.1 dof zinc finger protein DOF1.5-like [Cucumis melo var. makuwa] >TYK13208.1 dof zinc finger protein DOF1.5-like [Cucumis melo var. makuwa])

HSP 1 Score: 366.3 bits (939), Expect = 1.5e-97
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK 60
           MAEVHSSN DGIKLFGTMIHLQTRKLKEEPEKGG VAGGGEGDETEMKRPEKIIPCPRCK
Sbjct: 1   MAEVHSSNADGIKLFGTMIHLQTRKLKEEPEKGGPVAGGGEGDETEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120

Query: 121 EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS 174
           EDYGQYYDAASGIIHQLELD VEGWHLTVAEQDFTKVFPFKRRKIIGQHGQ+S
Sbjct: 121 EDYGQYYDAASGIIHQLELDAVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQTS 173

[Close]

BLAST of CsaV3_6G050890 vs. NCBI nr
Match: XP_038881357.1 (dof zinc finger protein DOF1.5-like [Benincasa hispida])

HSP 1 Score: 342.0 bits (876), Expect = 2.9e-90
Identity = 159/173 (91.91%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK 60
           MA+VHSSN+DGIKLFGTMIHLQ RK+KEEPEK     GGG GDETEMKRPEKIIPCPRCK
Sbjct: 1   MAQVHSSNSDGIKLFGTMIHLQNRKMKEEPEK----HGGGAGDETEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEL 
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELP 120

Query: 121 EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS 174
           EDYGQ YDAASGIIHQLELDTVEGWHLTVAEQDFT+VFPFKRRKIIGQHGQ+S
Sbjct: 121 EDYGQLYDAASGIIHQLELDTVEGWHLTVAEQDFTQVFPFKRRKIIGQHGQTS 169

[Close]

BLAST of CsaV3_6G050890 vs. NCBI nr
Match: XP_022978762.1 (dof zinc finger protein DOF1.5-like [Cucurbita maxima])

HSP 1 Score: 325.9 bits (834), Expect = 2.2e-85
Identity = 147/173 (84.97%), Postives = 160/173 (92.49%), Query Frame = 0


Query: 1   MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK 60
           MA+VH S T GIKLFGT+I LQTRK+K++PEKGG   GG +GD+TEMKRPEKIIPCPRCK
Sbjct: 48  MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 107

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGE+ 
Sbjct: 108 SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMP 167

Query: 121 EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS 174
           +DYGQ YDAASGIIHQLELD VEGWHL VAEQDFT+VFP KR+KIIGQ+GQ+S
Sbjct: 168 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 220

[Close]

BLAST of CsaV3_6G050890 vs. NCBI nr
Match: XP_022925765.1 (dof zinc finger protein DOF1.5-like [Cucurbita moschata] >KAG6581357.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034643.1 Dof zinc finger protein DOF1.5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84
Identity = 149/173 (86.13%), Postives = 160/173 (92.49%), Query Frame = 0


Query: 1   MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK 60
           MA+ H S T GIKLFGT+I LQTRK+K++PEKGG   GGGEGD+TEMKRPEKIIPCPRCK
Sbjct: 1   MAQFHGSATAGIKLFGTIIPLQTRKVKDQPEKGG---GGGEGDQTEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEL 
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELP 120

Query: 121 EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS 174
           +DYGQ YDAASGIIHQLELD VEGWHL VAEQDFT+VFP KR+KIIGQ+GQ+S
Sbjct: 121 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 170

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BLAST of CsaV3_6G050890 vs. ExPASy Swiss-Prot
Match: P68350 (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.1e-39
Identity = 90/171 (52.63%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 6   SSNTDGIKLFGTMIHL-----QTRKLKE-----EPEKGGSVA-GGGEGDETEMKRPEKII 65
           + ++ GIKLFG  I       QT K +E     +PE   + A      D T  KRP+KII
Sbjct: 3   TQDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKII 62

Query: 66  PCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRT 125
           PCPRCKSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRR++KPP     
Sbjct: 63  PCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPP----- 122

Query: 126 LSGELSEDYGQYYDAASGIIHQLELDT--VEGWH-LTVAEQDFTKVFPFKR 163
             G +   + +   AA+G + Q+ELD   VE W   T +   F   FP KR
Sbjct: 123 --GRVG-GFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKR 165

[Close]

BLAST of CsaV3_6G050890 vs. ExPASy Swiss-Prot
Match: O22967 (Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-38
Identity = 90/179 (50.28%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 6   SSNTDGIKLFGTMIHLQTRKLKEE-----PEKGGSVA--GGGEGDETEMKRPEKIIPCPR 65
           + ++ GIKLFG  I   TR +K E     PE+  ++A       D T  KRP+KII CPR
Sbjct: 3   TQDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPR 62

Query: 66  CKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGE 125
           CKSM+TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVP+GAGRR++KPP   R + G 
Sbjct: 63  CKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPG--RVVVGM 122

Query: 126 LSEDYGQYYDAASGIIHQLELDT---VEGWH--LTVAEQDFTKVFPFKRRKIIGQHGQS 173
           L +  G         + Q+EL     VE W      A   F   FP KR +     GQS
Sbjct: 123 LGDGNG---------VRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRCYSD-GQS 169

[Close]

BLAST of CsaV3_6G050890 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-29
Identity = 56/88 (63.64%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 22  QTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFC 81
           +T K  +  E+ G  A   EG   ++K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFC
Sbjct: 109 ETTKAAKTNEESGGTACSQEG---KLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFC 168

Query: 82  KGCQRYWTAGGALRNVPIGAGRRRAKPP 110
           K CQRYWTAGG +RNVP+GAGRR+ K P
Sbjct: 169 KKCQRYWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of CsaV3_6G050890 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-28
Identity = 59/100 (59.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 12  IKLFGTMIH----LQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCKSMDTKFC 71
           IKLFG  I     L+    +EE  +  ++    E D+T +K+P KI+PCPRC SM+TKFC
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKT-LKKPTKILPCPRCNSMETKFC 68

Query: 72  YFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAK 108
           Y+NNYNVNQPRHFCK CQRYWT+GG +R+VPIGAGRR+ K
Sbjct: 69  YYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

[Close]

BLAST of CsaV3_6G050890 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 43  DETEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAG 102
           D   +K+P KI+PCPRCKSM+TKFCY+NNYN+NQPRHFCK CQRYWTAGG +RNVP+GAG
Sbjct: 99  DGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG 158

Query: 103 RRRAK 108
           RR+ K
Sbjct: 159 RRKNK 163

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BLAST of CsaV3_6G050890 vs. ExPASy TrEMBL
Match: A0A0A0KKD0 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G519570 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 5.7e-100
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK 60
           MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK
Sbjct: 1   MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120

Query: 121 EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS 174
           EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS
Sbjct: 121 EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS 173

[Close]

BLAST of CsaV3_6G050890 vs. ExPASy TrEMBL
Match: A0A5D3CPV7 (Dof zinc finger protein DOF1.5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008210 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 7.0e-98
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK 60
           MAEVHSSN DGIKLFGTMIHLQTRKLKEEPEKGG VAGGGEGDETEMKRPEKIIPCPRCK
Sbjct: 1   MAEVHSSNADGIKLFGTMIHLQTRKLKEEPEKGGPVAGGGEGDETEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120

Query: 121 EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS 174
           EDYGQYYDAASGIIHQLELD VEGWHLTVAEQDFTKVFPFKRRKIIGQHGQ+S
Sbjct: 121 EDYGQYYDAASGIIHQLELDAVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQTS 173

[Close]

BLAST of CsaV3_6G050890 vs. ExPASy TrEMBL
Match: A0A1S3CSQ8 (dof zinc finger protein DOF1.5-like OS=Cucumis melo OX=3656 GN=LOC103504446 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 7.0e-98
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK 60
           MAEVHSSN DGIKLFGTMIHLQTRKLKEEPEKGG VAGGGEGDETEMKRPEKIIPCPRCK
Sbjct: 1   MAEVHSSNADGIKLFGTMIHLQTRKLKEEPEKGGPVAGGGEGDETEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120

Query: 121 EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS 174
           EDYGQYYDAASGIIHQLELD VEGWHLTVAEQDFTKVFPFKRRKIIGQHGQ+S
Sbjct: 121 EDYGQYYDAASGIIHQLELDAVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQTS 173

[Close]

BLAST of CsaV3_6G050890 vs. ExPASy TrEMBL
Match: A0A6J1ILZ6 (dof zinc finger protein DOF1.5-like OS=Cucurbita maxima OX=3661 GN=LOC111478624 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.1e-85
Identity = 147/173 (84.97%), Postives = 160/173 (92.49%), Query Frame = 0


Query: 1   MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK 60
           MA+VH S T GIKLFGT+I LQTRK+K++PEKGG   GG +GD+TEMKRPEKIIPCPRCK
Sbjct: 48  MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 107

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGE+ 
Sbjct: 108 SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMP 167

Query: 121 EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS 174
           +DYGQ YDAASGIIHQLELD VEGWHL VAEQDFT+VFP KR+KIIGQ+GQ+S
Sbjct: 168 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 220

[Close]

BLAST of CsaV3_6G050890 vs. ExPASy TrEMBL
Match: A0A6J1EJ46 (dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC111433075 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.8e-85
Identity = 149/173 (86.13%), Postives = 160/173 (92.49%), Query Frame = 0


Query: 1   MAEVHSSNTDGIKLFGTMIHLQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCK 60
           MA+ H S T GIKLFGT+I LQTRK+K++PEKGG   GGGEGD+TEMKRPEKIIPCPRCK
Sbjct: 1   MAQFHGSATAGIKLFGTIIPLQTRKVKDQPEKGG---GGGEGDQTEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEL 
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELP 120

Query: 121 EDYGQYYDAASGIIHQLELDTVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQSS 174
           +DYGQ YDAASGIIHQLELD VEGWHL VAEQDFT+VFP KR+KIIGQ+GQ+S
Sbjct: 121 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 170

[Close]

BLAST of CsaV3_6G050890 vs. TAIR 10
Match: AT1G29160.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 161.8 bits (408), Expect = 5.1e-40
Identity = 90/171 (52.63%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 6   SSNTDGIKLFGTMIHL-----QTRKLKE-----EPEKGGSVA-GGGEGDETEMKRPEKII 65
           + ++ GIKLFG  I       QT K +E     +PE   + A      D T  KRP+KII
Sbjct: 3   TQDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKII 62

Query: 66  PCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRT 125
           PCPRCKSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRR++KPP     
Sbjct: 63  PCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPP----- 122

Query: 126 LSGELSEDYGQYYDAASGIIHQLELDT--VEGWH-LTVAEQDFTKVFPFKR 163
             G +   + +   AA+G + Q+ELD   VE W   T +   F   FP KR
Sbjct: 123 --GRVG-GFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKR 165

[Close]

BLAST of CsaV3_6G050890 vs. TAIR 10
Match: AT2G34140.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 161.0 bits (406), Expect = 8.6e-40
Identity = 90/179 (50.28%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 6   SSNTDGIKLFGTMIHLQTRKLKEE-----PEKGGSVA--GGGEGDETEMKRPEKIIPCPR 65
           + ++ GIKLFG  I   TR +K E     PE+  ++A       D T  KRP+KII CPR
Sbjct: 3   TQDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPR 62

Query: 66  CKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGE 125
           CKSM+TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVP+GAGRR++KPP   R + G 
Sbjct: 63  CKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPG--RVVVGM 122

Query: 126 LSEDYGQYYDAASGIIHQLELDT---VEGWH--LTVAEQDFTKVFPFKRRKIIGQHGQS 173
           L +  G         + Q+EL     VE W      A   F   FP KR +     GQS
Sbjct: 123 LGDGNG---------VRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRCYSD-GQS 169

[Close]

BLAST of CsaV3_6G050890 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 56/88 (63.64%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 22  QTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFC 81
           +T K  +  E+ G  A   EG   ++K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFC
Sbjct: 109 ETTKAAKTNEESGGTACSQEG---KLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFC 168

Query: 82  KGCQRYWTAGGALRNVPIGAGRRRAKPP 110
           K CQRYWTAGG +RNVP+GAGRR+ K P
Sbjct: 169 KKCQRYWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of CsaV3_6G050890 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 56/88 (63.64%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 22  QTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFC 81
           +T K  +  E+ G  A   EG   ++K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFC
Sbjct: 109 ETTKAAKTNEESGGTACSQEG---KLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFC 168

Query: 82  KGCQRYWTAGGALRNVPIGAGRRRAKPP 110
           K CQRYWTAGG +RNVP+GAGRR+ K P
Sbjct: 169 KKCQRYWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of CsaV3_6G050890 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 127.9 bits (320), Expect = 8.1e-30
Identity = 59/100 (59.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 12  IKLFGTMIH----LQTRKLKEEPEKGGSVAGGGEGDETEMKRPEKIIPCPRCKSMDTKFC 71
           IKLFG  I     L+    +EE  +  ++    E D+T +K+P KI+PCPRC SM+TKFC
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKT-LKKPTKILPCPRCNSMETKFC 68

Query: 72  YFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAK 108
           Y+NNYNVNQPRHFCK CQRYWT+GG +R+VPIGAGRR+ K
Sbjct: 69  YYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

The following BLAST results are available for this feature:

BLAST of CsaV3_6G050890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134661.2	1.2e-99	100.00	cyclic dof factor 4 [Cucumis sativus] >KGN49304.1 hypothetical protein Csa_00323...	[more]
XP_008467024.1	1.5e-97	97.69	PREDICTED: dof zinc finger protein DOF1.5-like [Cucumis melo] >KAA0052620.1 dof ...	[more]
XP_038881357.1	2.9e-90	91.91	dof zinc finger protein DOF1.5-like [Benincasa hispida]	[more]
XP_022978762.1	2.2e-85	84.97	dof zinc finger protein DOF1.5-like [Cucurbita maxima]	[more]
XP_022925765.1	1.4e-84	86.13	dof zinc finger protein DOF1.5-like [Cucurbita moschata] >KAG6581357.1 Dof zinc ...	[more]

BLAST of CsaV3_6G050890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68350	7.1e-39	52.63	Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV...	[more]
O22967	1.2e-38	50.28	Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1	[more]
Q93ZL5	1.8e-29	63.64	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8W1E3	1.1e-28	59.00	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q8LFV3	1.3e-27	75.38	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]

BLAST of CsaV3_6G050890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKD0	5.7e-100	100.00	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G519570 PE...	[more]
A0A5D3CPV7	7.0e-98	97.69	Dof zinc finger protein DOF1.5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CSQ8	7.0e-98	97.69	dof zinc finger protein DOF1.5-like OS=Cucumis melo OX=3656 GN=LOC103504446 PE=4...	[more]
A0A6J1ILZ6	1.1e-85	84.97	dof zinc finger protein DOF1.5-like OS=Cucurbita maxima OX=3661 GN=LOC111478624 ...	[more]
A0A6J1EJ46	6.8e-85	86.13	dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC11143307...	[more]

BLAST of CsaV3_6G050890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29160.1	5.1e-40	52.63	Dof-type zinc finger DNA-binding family protein	[more]
AT2G34140.1	8.6e-40	50.28	Dof-type zinc finger DNA-binding family protein	[more]
AT5G39660.1	1.2e-30	63.64	cycling DOF factor 2	[more]
AT5G39660.2	1.2e-30	63.64	cycling DOF factor 2	[more]
AT5G62430.1	8.1e-30	59.00	cycling DOF factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 52..107 e-value: 1.2E-31 score: 108.7
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 56..92
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 54..108 score: 28.238934
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..49
None	No IPR available	PANTHER	PTHR31089:SF49	DOF ZINC FINGER PROTEIN DOF1.5-LIKE	coord: 7..166
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 7..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G050890.1	CsaV3_6G050890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding