CsaV3_6G050210 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G050210
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 29286671 .. 29287109 (-)
RNA-Seq ExpressionCsaV3_6G050210
SyntenyCsaV3_6G050210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTATGGGCTCGATGAGCCAAACATTCAGTCTGTTTTTCCTAAAGATGATGGAAAAAAGGCTTTGGATGCCTGGAGTACTAAAGTGGCTCGAACTAATAGAAGACTTGCTCGTCAAAGAACCCTTACTTCTTTCACTACTCGATCCTCTTCTTCTTCTTCCTGTGGTTATCATGATGATTATTCTAAGGGTTTAACTATAACCCATTTCCCTAATACTGATTCTTCACATAATAATCGCCATCTTTTCACCTTTTGTACTCCTGACAATAAGGTTTATGATGTTTAATCAAAGTTTTCATTTATATATGTATATGTATTGATTACTTTTCCTTTAATTGTTGTTTTTTCTTTTTTGTCTCTTAAGATTTTGAGAATGCTACTGAAGAAGGAGCTGAAGAACAGTGATGTTGGATCTTTGGGCAGGATTGTCCTCCCCAAG

mRNA sequence

ATGGGCTCGATGAGCCAAACATTCAGTCTGTTTTTCCTAAAGATGATGGAAAAAAGGCTTTGGATGCCTGGAGTACTAAAGTGGCTCGAACTAATAGAAGACTTGCTCGTCAAAGAACCCTTACTTCTTTCACTACTCGATCCTCTTCTTCTTCTTCCTGTGGTTATCATGATGATTATTCTAAGGGTTTA

Coding sequence (CDS)

ATGGGCTCGATGAGCCAAACATTCAGTCTGTTTTTCCTAAAGATGATGGAAAAAAGGCTTTGGATGCCTGGAGTACTAAAGTGGCTCGAACTAATAGAAGACTTGCTCGTCAAAGAACCCTTACTTCTTTCACTACTCGATCCTCTTCTTCTTCTTCCTGTGGTTATCATGATGATTATTCTAAGGGTTTA

Protein sequence

MGSMSQTFSLFFLKMMEKRLWMPGVLKWLELIEDLLVKEPLLLSLLDPLLLLPVVIMMIILRVX
Homology
[Close]
BLAST of CsaV3_6G050210 vs. NCBI nr
Match: KAE8647692.1 (hypothetical protein Csa_023541, partial [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 9.0e-21
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MGSMSQTFSLFFLKMMEKRLWMPGVLKWLELIEDLLVKEPLLLSLLDPLLLLPVVIMMII 60
          MGSMSQTFSLFFLKMMEKRLWMPGVLKWLELIEDLLVKEPLLLSLLDPLLLLPVVIMMII
Sbjct: 1  MGSMSQTFSLFFLKMMEKRLWMPGVLKWLELIEDLLVKEPLLLSLLDPLLLLPVVIMMII 60

Query: 61 LRV 64
          LRV
Sbjct: 61 LRV 63

The following BLAST results are available for this feature:
BLAST of CsaV3_6G050210 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647692.19.0e-21100.00hypothetical protein Csa_023541, partial [Cucumis sativus][more]
BLAST of CsaV3_6G050210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G050210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G050210 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G050210.1CsaV3_6G050210.1mRNA