CsaV3_6G050050 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G050050
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 29182864 .. 29183603 (+)
RNA-Seq ExpressionCsaV3_6G050050
SyntenyCsaV3_6G050050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGGAAGGTTCAATGTCGTCTTCTGGTCTTACATGGACTAGCCTCACGCTTCAAGCAGGCGCCAGATTCCCCTCAATACCCTCAAATCAAGGAACTATTTGGCCCTGATCCCCTGGCTTTTATTGAGGTAACTTGTCTCGCTTTATTACGCCTTACGTTTGAATTATGTGTTTAATGCCGCTTTTTCTGCCATTCTCTTTACTTTCTTTTTTGCTCTGTCCAATGATTTTTCATTGGATTTTGGTTTCCGATACTGAATTTATATATTTTGAGTGAATTTCTGTTGTATTTTATTGGTTCGGTATGAGTGTATTCCTTGTTCTGCCTTGGTTTGTGCATCTTTTGTTGGCTAATCGAACGTTTCTAGGTTTTGATTTCGATGCTATTGTTTCTCTTTTAGCAATCGGATCTTGCATTTATAGCGGTTTTGAGAGTCACTGCGCGTAAATGCACCATCTCATTTGTTTCGGTCATTTTGATTGTTTACTTCAATTATTACATCATACATTTTTCACATGCAATGGAAACCTTGTTCATCTTTTGTTCTGCCTGAAGAGTATAATTGTTGATGTAATACAAGAACTACAATCTTAGTGGTTTCCATCTCCACAAATACGTTTATCACTTCAGTTTAGTCCTCTTCAATCTTCATTGAGCCCTGGTTTCAGCTATGGAACGAGCATTATCAAGCATCTTGAAACTATTGTTATCCTACAGCAGTTTTTCTACAGTTGA

mRNA sequence

ATGAAGAGGAAGGTTCAATGTCGTCTTCTGGTCTTACATGGACTAGCCTCACGCTTCAAGCAGGCGCCAGATTCCCCTCAATACCCTCAAATCAAGGAACTATTTGGCCCTGATCCCCTGGCTTTTATTGAGCAATCGGATCTTGCATTTATAGCGGTTTTGAGAGTCACTGCGCGTAAATGCACCATCTCATTTGTTTCGTTTAGTCCTCTTCAATCTTCATTGAGCCCTGGTTTCAGCTATGGAACGAGCATTATCAAGCATCTTGAAACTATTGTTATCCTACAGCAGTTTTTCTACAGTTGA

Coding sequence (CDS)

ATGAAGAGGAAGGTTCAATGTCGTCTTCTGGTCTTACATGGACTAGCCTCACGCTTCAAGCAGGCGCCAGATTCCCCTCAATACCCTCAAATCAAGGAACTATTTGGCCCTGATCCCCTGGCTTTTATTGAGCAATCGGATCTTGCATTTATAGCGGTTTTGAGAGTCACTGCGCGTAAATGCACCATCTCATTTGTTTCGTTTAGTCCTCTTCAATCTTCATTGAGCCCTGGTTTCAGCTATGGAACGAGCATTATCAAGCATCTTGAAACTATTGTTATCCTACAGCAGTTTTTCTACAGTTGA

Protein sequence

MKRKVQCRLLVLHGLASRFKQAPDSPQYPQIKELFGPDPLAFIEQSDLAFIAVLRVTARKCTISFVSFSPLQSSLSPGFSYGTSIIKHLETIVILQQFFYS*
Homology
[Close]
BLAST of CsaV3_6G050050 vs. NCBI nr
Match: KGN49218.1 (hypothetical protein Csa_003958 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 4.7e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MKRKVQCRLLVLHGLASRFKQAPDSPQYPQIKELFGPDPLAFIEQSDLAFIAVLRVTARK 60
           MKRKVQCRLLVLHGLASRFKQAPDSPQYPQIKELFGPDPLAFIEQSDLAFIAVLRVTARK
Sbjct: 1   MKRKVQCRLLVLHGLASRFKQAPDSPQYPQIKELFGPDPLAFIEQSDLAFIAVLRVTARK 60

Query: 61  CTISFVSFSPLQSSLSPGFSYGTSIIKHLETIVILQQFFYS 102
           CTISFVSFSPLQSSLSPGFSYGTSIIKHLETIVILQQFFYS
Sbjct: 61  CTISFVSFSPLQSSLSPGFSYGTSIIKHLETIVILQQFFYS 101

[Close]
BLAST of CsaV3_6G050050 vs. ExPASy TrEMBL
Match: A0A0A0KI22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517260 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.3e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MKRKVQCRLLVLHGLASRFKQAPDSPQYPQIKELFGPDPLAFIEQSDLAFIAVLRVTARK 60
           MKRKVQCRLLVLHGLASRFKQAPDSPQYPQIKELFGPDPLAFIEQSDLAFIAVLRVTARK
Sbjct: 1   MKRKVQCRLLVLHGLASRFKQAPDSPQYPQIKELFGPDPLAFIEQSDLAFIAVLRVTARK 60

Query: 61  CTISFVSFSPLQSSLSPGFSYGTSIIKHLETIVILQQFFYS 102
           CTISFVSFSPLQSSLSPGFSYGTSIIKHLETIVILQQFFYS
Sbjct: 61  CTISFVSFSPLQSSLSPGFSYGTSIIKHLETIVILQQFFYS 101

The following BLAST results are available for this feature:
BLAST of CsaV3_6G050050 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49218.14.7e-48100.00hypothetical protein Csa_003958 [Cucumis sativus][more]
BLAST of CsaV3_6G050050 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G050050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI222.3e-48100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517260 PE=4 SV=1[more]
BLAST of CsaV3_6G050050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G050050.1CsaV3_6G050050.1mRNA