CsaV3_6G049840 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G049840
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionVacuolar protein sorting-associated protein 28 homolog
Locationchr6: 29062378 .. 29065509 (+)
RNA-Seq ExpressionCsaV3_6G049840
SyntenyCsaV3_6G049840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTGGCTATATCATTGGTTAATGTTTGTCCATTACAAGTACCCTACAAATTAAGGTTTGGGCCAAGATAGATTGGTGTGAAGCCCAAGGTTGGGGCGATCAATTAAAAAGGCCCAACAGTAATCAGATAAAGCAAAGAGGAGAGACCGCATGAAGCTCACTGTACCGTCGCTCCACCGTAACAGAAGATGAGATGAATTTCTTTTTCGTTTCGTTTCATTTTTATTTTGTATTTTTTGGTATTTTGGTTTGCAACTGCCACACGCAGATGCCGTAAGCAGCAATAATAACATGTGCGAGCCCACACGCAATCTTTTCCCTCTCTCTCCACATTTCTTCTTCTTCTCCTCCTCCGACACGACCTCCGTCTCTCACCATTCACATATCGCCTCTCTTTCTCTCATCAGGGTTAACTTCTCCCCTTCTCCTTCTATTTAGATTGTTCTTCTTGTTTGTTTCCTTTTGATCTCTCCATTCTTTTACTTTTCCCCTTTTGCTGCTACTTTTTTCCTTGTTTGCCCGCCGTTAATTCGGAGGCAAAACTATGAATAACAAGTTTTTGTTTGTTGTTTGTCTCTTGCTCTACGATAATATTTCTCTTCTCTTTTCTTAGATCCGATTCGATTCAAATTTGCTTGATTTTCCAAAGGGTTTTCTCTGTTTTTCAATTTCTTTTTCCTCCAATTAAAGAACCCATGTCTTGTTTTTCCTTCTTCACGTCTCTAAACTGAATGGATTTTGGTTATATTTTTGTGGGTTTGGAGTGTTGATCTGTGAAATTCAACCTTTTCTGGATTTATGTTTACTTTCTATCTGTGTTTTCTTCAGTGAAGAAGGTCTTTCTCTTTGCGCGTGTCCCGTTCTCTTCTCCAATCCTCCACAGAACATAAAACCCCCAATTTCTCTTCACCATTCGCACCCCGAAGATTGATTCAATGGAGGTCAAGCTTTGGAACGACAAGCGCGAGAGAGAAATGTACGACAATTTTGCAGAGCTCTACGCCATTATAAAGGCTACCGAAAAGCTCGAAAAGGCTTACATCCGTGACATCATTTCCTCCTCCGATTACGAGGCCGAATGCTTCAAACTCATCGCACATTTCAAGACCCTCGCCTCGACACTCAAAGACACAGTCCCGAGTATTGAACGTTTTGCTGATACTTACAAAATGGACTGTCCGGCGGCGATCAACCGTCTTGTGATAACTGGGGTACCTGCCACGGTGGAGCACAGGGCGGCCGCCGCTGCTTCCGCCACTACCTCCGCTGCTATTGTGGCGGAGTGTGTGCAGAACTTTATTACGGCTATGGATTCGTTAAAATTGAACATGGTAGCGGTTGATCAAGTGCACCCCTTGCTCTCGGATCTCTCTGCTTCATTGAACAAATTGACCATTCTGCCCCCGGATTTTGAAGGGAAAACAAAGATGAAAGAGTGGCTTGGACGACTTTCGAAAATGGGTGCCGCGGATGAGTTAACAGAGCAGCAGGCTCGGCAGCTTCACTTCGATCTTGAATCTTCTTATAATTCATTCATGGCGGCTTTGCCTACTGCTGGTACTTGATTGTTAATGGTAATCTTGTGTGTATATAGATACAAGAGCTTATTGTTTTTGTCGTACTGCATAAGTTCTCTTTCTTCATAAATCAAGATGGGCTGTGCTCTTTTCCCCCTTTAATTATGGATGCCTGTTGAAGAAGATGGAGCTTTTTTTTCCCTCTTTAAATTATCACATTCAGTTTAAGAAGGCTCTTGAATTTCTATTGTTGGTTTAGATTGTTTCTGAATCTTGTATTTAATTCTGAAAATGTGCTTTGGAACTTGTTCAAAGTAAGATTATGGGTTCGGTTTGGATTGGGATGCCTGAACCCATGATTCTATGGTCATTGGTAGGTCTGTTCTATTAGGCTCTTACTTTCAAACTCATGGGTTTGTATAGTTCTTTATTGAGAAACCTACTTGGCTACTCATTTCACCAAATTATTGTTTGGAAACTGGTTCTGAATTGTGCATGTGATATCCTGATTGTTGTAAGAATTTCTTTTTTGCTTTTGAAGCTGATGCTGCTATGTGCCAAGAGCTATATCCACATCTGATCAACAAATCCTTTTTTGGATACTTTTGGGGTTATGTGGGGTTGGATTTTGTGACTTTTGTGCTTTCAGTTCCAGAACTCATGGGTTACATTGTTACAGTTCTTTATCAGAAACCTGCATCATTTCCTCAACTTTTTCAAATCTCTGCTCATATTATATTTTGTCGTCCATACTGAATTTTCTTATTAATAAAGCATGTCAATCTAAGTCATGGCAAGTATCTAGTGACAATCTTGGCCTTGGAGACTACTTTTATTCCCTGAAGGCGGAATCCATGACCTTCAAGTTCAAGGAAGTTGTACTGATGATTAGTTCATTGGCAAGGCTCCAAATTTATTTAGCTACACCCACTTATCTTTTAGGATTATGGTTAGGCAATCTCTTGATGATGATTCAGATGTTGCAAGTTGTATTTAAATTGTAATATAATTAATTATAGTTTGAAGATATCATTTGAATTCTAACATTGATTTGCTTTAATGTTCTCAAAATGCCTGTTTGGTAACCTCATACTTTCACATCATTCCAAACAAAGACTGTATGATGGATGGCATCATGACAATGGCTCTGACCTAATTTGGTTTGGTTTGATTTGATTGAATTGAGCTATAAACTTGTGGTTAATATAGATTCACGTGAGAAGAGTTATTAGAATTCGTTTCAAACACTCAATCTCTCCTTGAAGACTATATGTGACAACCTAATTGATTGCGGACTATATTAGACTTGATAATTGTTTTAATTTAGATTGGGTTGATCATCACAGAATTGAATCATTTAAATCTTAGTCTAGATTCATGTTTAAGCCCATCCCTTTCCTTTTCAAATCTGGTGTTGTTCTTGACTATAGACATAATTTTTCTTCTTAGATCTAAAAATAGAGTTGCGATGTTCTCATCTACTTCTGATGTCTTAATTGCTTAGAGGTGGCATCAAGAATGTGAAAAATACATATATATTTTTTTTCAATTCCAAAATTCAATGAAGAAAAAAATATGTCCTTTATTTCATGTTGAATTAAATTGAGGAATCTGTG

mRNA sequence

ATGGAGGTCAAGCTTTGGAACGACAAGCGCGAGAGAGAAATGTACGACAATTTTGCAGAGCTCTACGCCATTATAAAGGCTACCGAAAAGCTCGAAAAGGCTTACATCCGTGACATCATTTCCTCCTCCGATTACGAGGCCGAATGCTTCAAACTCATCGCACATTTCAAGACCCTCGCCTCGACACTCAAAGACACAGTCCCGAGTATTGAACGTTTTGCTGATACTTACAAAATGGACTGTCCGGCGGCGATCAACCGTCTTGTGATAACTGGGGTACCTGCCACGGTGGAGCACAGGGCGGCCGCCGCTGCTTCCGCCACTACCTCCGCTGCTATTGTGGCGGAGTGTGTGCAGAACTTTATTACGGCTATGGATTCGTTAAAATTGAACATGGTAGCGGTTGATCAAGTGCACCCCTTGCTCTCGGATCTCTCTGCTTCATTGAACAAATTGACCATTCTGCCCCCGGATTTTGAAGGGAAAACAAAGATGAAAGAGTGGCTTGGACGACTTTCGAAAATGGGTGCCGCGGATGAGTTAACAGAGCAGCAGGCTCGGCAGCTTCACTTCGATCTTGAATCTTCTTATAATTCATTCATGGCGGCTTTGCCTACTGCTGGTACTTGA

Coding sequence (CDS)

ATGGAGGTCAAGCTTTGGAACGACAAGCGCGAGAGAGAAATGTACGACAATTTTGCAGAGCTCTACGCCATTATAAAGGCTACCGAAAAGCTCGAAAAGGCTTACATCCGTGACATCATTTCCTCCTCCGATTACGAGGCCGAATGCTTCAAACTCATCGCACATTTCAAGACCCTCGCCTCGACACTCAAAGACACAGTCCCGAGTATTGAACGTTTTGCTGATACTTACAAAATGGACTGTCCGGCGGCGATCAACCGTCTTGTGATAACTGGGGTACCTGCCACGGTGGAGCACAGGGCGGCCGCCGCTGCTTCCGCCACTACCTCCGCTGCTATTGTGGCGGAGTGTGTGCAGAACTTTATTACGGCTATGGATTCGTTAAAATTGAACATGGTAGCGGTTGATCAAGTGCACCCCTTGCTCTCGGATCTCTCTGCTTCATTGAACAAATTGACCATTCTGCCCCCGGATTTTGAAGGGAAAACAAAGATGAAAGAGTGGCTTGGACGACTTTCGAAAATGGGTGCCGCGGATGAGTTAACAGAGCAGCAGGCTCGGCAGCTTCACTTCGATCTTGAATCTTCTTATAATTCATTCATGGCGGCTTTGCCTACTGCTGGTACTTGA

Protein sequence

MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLASTLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQNFITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADELTEQQARQLHFDLESSYNSFMAALPTAGT*
Homology
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BLAST of CsaV3_6G049840 vs. NCBI nr
Match: XP_004134727.1 (vacuolar protein sorting-associated protein 28 homolog 2 [Cucumis sativus] >KGN49198.1 hypothetical protein Csa_003566 [Cucumis sativus])

HSP 1 Score: 403.3 bits (1035), Expect = 1.3e-108
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA
Sbjct: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN
Sbjct: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE
Sbjct: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 210
           LTEQQARQLHFDLESSYNSFMAALPTAGT
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 209

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BLAST of CsaV3_6G049840 vs. NCBI nr
Match: XP_038883329.1 (vacuolar protein sorting-associated protein 28 homolog 2 [Benincasa hispida] >XP_038883330.1 vacuolar protein sorting-associated protein 28 homolog 2 [Benincasa hispida])

HSP 1 Score: 401.7 bits (1031), Expect = 3.8e-108
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYE ECFKLIAHFKTLA
Sbjct: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYETECFKLIAHFKTLA 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN
Sbjct: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE
Sbjct: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 210
           LTEQQARQLHFDLESSYNSFMAALPTAGT
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 209

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BLAST of CsaV3_6G049840 vs. NCBI nr
Match: XP_008439898.1 (PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2 [Cucumis melo] >XP_016899348.1 PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2 [Cucumis melo] >KAA0052713.1 vacuolar protein sorting-associated protein 28-like protein 2 [Cucumis melo var. makuwa] >TYK13111.1 vacuolar protein sorting-associated protein 28-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 400.6 bits (1028), Expect = 8.4e-108
Identity = 207/209 (99.04%), Postives = 208/209 (99.52%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYE ECFKLIAHFKTLA
Sbjct: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYETECFKLIAHFKTLA 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN
Sbjct: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FITAMDSLKLNMVAVDQVHPLLSDL+ASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE
Sbjct: 121 FITAMDSLKLNMVAVDQVHPLLSDLAASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 210
           LTEQQARQLHFDLESSYNSFMAALPTAGT
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 209

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BLAST of CsaV3_6G049840 vs. NCBI nr
Match: XP_022977932.1 (vacuolar protein sorting-associated protein 28 homolog 2 [Cucurbita maxima] >XP_022977933.1 vacuolar protein sorting-associated protein 28 homolog 2 [Cucurbita maxima])

HSP 1 Score: 395.2 bits (1014), Expect = 3.5e-106
Identity = 203/209 (97.13%), Postives = 207/209 (99.04%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAY+RDIISSSDYE ECFKLIAHFKTLA
Sbjct: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYVRDIISSSDYETECFKLIAHFKTLA 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           STLKDTVPSIERFADTYKMDCPAAINRLVI+GVPATVEHRA+AAAS+TTSAAIVAECVQN
Sbjct: 61  STLKDTVPSIERFADTYKMDCPAAINRLVISGVPATVEHRASAAASSTTSAAIVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FITAMDSLKLNMVAVDQVHPLLSDL ASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE
Sbjct: 121 FITAMDSLKLNMVAVDQVHPLLSDLFASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 210
           LTEQQARQLHFDLESSYNSFMAALPTAGT
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 209

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BLAST of CsaV3_6G049840 vs. NCBI nr
Match: XP_023544381.1 (vacuolar protein sorting-associated protein 28 homolog 2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023544382.1 vacuolar protein sorting-associated protein 28 homolog 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 393.3 bits (1009), Expect = 1.3e-105
Identity = 202/209 (96.65%), Postives = 206/209 (98.56%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAY+RDII SSDYE ECFKLIAHFKTLA
Sbjct: 37  MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYVRDIIPSSDYETECFKLIAHFKTLA 96

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           STLKDTVPSIERFADTYKMDCPAAINRLVI+GVPATVEHRA+AAAS+TTSAAIVAECVQN
Sbjct: 97  STLKDTVPSIERFADTYKMDCPAAINRLVISGVPATVEHRASAAASSTTSAAIVAECVQN 156

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FITAMDSLKLNMVAVDQVHPLLSDL ASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE
Sbjct: 157 FITAMDSLKLNMVAVDQVHPLLSDLFASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 216

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 210
           LTEQQARQLHFDLESSYNSFMAALPTAGT
Sbjct: 217 LTEQQARQLHFDLESSYNSFMAALPTAGT 245

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BLAST of CsaV3_6G049840 vs. ExPASy Swiss-Prot
Match: Q9S9T7 (Vacuolar protein sorting-associated protein 28 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS28-2 PE=1 SV=2)

HSP 1 Score: 354.8 bits (909), Expect = 6.9e-97
Identity = 179/208 (86.06%), Postives = 197/208 (94.71%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMY+NFAEL+AIIKATEKLEKAYIRD+I+ S+YE+EC KLI HFKTL+
Sbjct: 2   MEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLS 61

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           +TLKDTVP+IERFADTYKMDCPAA+ RLV +G+PATVEHRA  AAS + SA+IVAECVQN
Sbjct: 62  ATLKDTVPNIERFADTYKMDCPAALYRLVTSGLPATVEHRATVAASTSNSASIVAECVQN 121

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FIT+MDSLKLNMVAVDQV+PLLSDLSASLNKL+ILPPDFEGKTKMKEWL RLSKMGAADE
Sbjct: 122 FITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKTKMKEWLSRLSKMGAADE 181

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAG 209
           LTEQQ+RQLHFDLESSYNSFMAALP AG
Sbjct: 182 LTEQQSRQLHFDLESSYNSFMAALPKAG 209

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BLAST of CsaV3_6G049840 vs. ExPASy Swiss-Prot
Match: O65421 (Vacuolar protein sorting-associated protein 28 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS28-1 PE=1 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 5.0e-95
Identity = 177/208 (85.10%), Postives = 196/208 (94.23%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMY+NFAELYAIIKATEKLEKAYIRD+IS S+YE EC KLI HFKTL+
Sbjct: 1   MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLS 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           ++LKD VP+IERFA+TYKMDC AA+ RLV +GVPATVEHRAAA+AS ++SA++VAECVQN
Sbjct: 61  ASLKDMVPNIERFAETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FIT+MDSLKLNMVAVDQV+PLLSDLSASLNKL+ILPPDFEGK KMKEWL RLSKMGA+DE
Sbjct: 121 FITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKIKMKEWLLRLSKMGASDE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAG 209
           LTEQQARQLHFDLESSYNSFMAALP AG
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPNAG 208

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BLAST of CsaV3_6G049840 vs. ExPASy Swiss-Prot
Match: Q54NF1 (Vacuolar protein sorting-associated protein 28 OS=Dictyostelium discoideum OX=44689 GN=vps28 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-51
Identity = 109/203 (53.69%), Postives = 143/203 (70.44%), Query Frame = 0 

Query: 2   EVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLAS 61
           EVKL+N+  EREMY+N AELY+IIK TE LEKAYIRD +S  DY   C KLIA FK+  +
Sbjct: 84  EVKLFNNNIEREMYENLAELYSIIKVTEHLEKAYIRDDVSPKDYTTACSKLIAQFKSSQT 143

Query: 62  TLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQNF 121
            LKD V ++ +F   Y ++C AA +RLVI G P+T+EH    +++ +  A  VAE VQ F
Sbjct: 144 LLKDQVSNVGQFMKDYDLNCKAAFDRLVIKGFPSTLEHNTNESSTDSAMAKNVAEAVQLF 203

Query: 122 ITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADEL 181
           IT MDS++L +V+VD ++PLLSDL  SLNK   L P FEGK K+K W+  L++M A DEL
Sbjct: 204 ITTMDSIRLKLVSVDGIYPLLSDLMESLNKNQWLGPTFEGKEKIKNWISILNQMKATDEL 263

Query: 182 TEQQARQLHFDLESSYNSFMAAL 205
            + Q+RQL FDL++SYN F  A+
Sbjct: 264 DDDQSRQLLFDLDNSYNIFYKAI 286

[Close]
BLAST of CsaV3_6G049840 vs. ExPASy Swiss-Prot
Match: Q9V359 (Vacuolar protein sorting-associated protein 28 homolog OS=Drosophila melanogaster OX=7227 GN=Vps28 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 9.5e-38
Identity = 85/200 (42.50%), Postives = 127/200 (63.50%), Query Frame = 0 

Query: 2   EVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLAS 61
           EVKL+ + RERE YDN A+LYAII   ++LEKAYIRD I+  +Y A C K +  +K    
Sbjct: 11  EVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSKYLVQYKVAFK 70

Query: 62  TLK-DTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 121
            ++ D  PS+E F   +++DCPAA+ R +    P T+            ++  +AE V  
Sbjct: 71  QVQCDEFPSVETFVKKFRLDCPAALER-IREDRPITIRD------DKGNTSKCIAEIVSL 130

Query: 122 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 181
           FIT MD L+L +  +D + P + DL+ ++N+L+++P DF+ K K+++WLG L++M A+DE
Sbjct: 131 FITIMDKLRLQINTMDALQPDVKDLADNMNRLSLIPEDFDAKLKVEKWLGSLNEMQASDE 190

Query: 182 LTEQQARQLHFDLESSYNSF 201
           L+E Q RQ  FDLES+Y  F
Sbjct: 191 LSEGQVRQFLFDLESAYADF 203

[Close]
BLAST of CsaV3_6G049840 vs. ExPASy Swiss-Prot
Match: Q9UK41 (Vacuolar protein sorting-associated protein 28 homolog OS=Homo sapiens OX=9606 GN=VPS28 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.1e-36
Identity = 81/200 (40.50%), Postives = 127/200 (63.50%), Query Frame = 0 

Query: 2   EVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLAS 61
           EVKL+ + RERE YDN AEL+A++K  + LEKAYI+D +S S+Y A C +L+  +K    
Sbjct: 23  EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQYKAAFR 82

Query: 62  TLKDT-VPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 121
            ++ + + SI+ F   +++DCP A+ R +    P T++               +A+ V  
Sbjct: 83  QVQGSEISSIDEFCRKFRLDCPLAMER-IKEDRPITIKD------DKGNLNRCIADVVSL 142

Query: 122 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 181
           FIT MD L+L + A+D++ P L +L  ++++++ LPPDFEG+  + +WL  LS M A+DE
Sbjct: 143 FITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDE 202

Query: 182 LTEQQARQLHFDLESSYNSF 201
           L + Q RQ+ FDLES+YN+F
Sbjct: 203 LDDSQVRQMLFDLESAYNAF 215

[Close]
BLAST of CsaV3_6G049840 vs. ExPASy TrEMBL
Match: A0A0A0KI07 (Vacuolar protein sorting-associated protein 28 homolog OS=Cucumis sativus OX=3659 GN=Csa_6G517060 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 6.3e-109
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA
Sbjct: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN
Sbjct: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE
Sbjct: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 210
           LTEQQARQLHFDLESSYNSFMAALPTAGT
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 209

[Close]
BLAST of CsaV3_6G049840 vs. ExPASy TrEMBL
Match: A0A1S3B0K8 (Vacuolar protein sorting-associated protein 28 homolog OS=Cucumis melo OX=3656 GN=LOC103484547 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.1e-108
Identity = 207/209 (99.04%), Postives = 208/209 (99.52%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYE ECFKLIAHFKTLA
Sbjct: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYETECFKLIAHFKTLA 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN
Sbjct: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FITAMDSLKLNMVAVDQVHPLLSDL+ASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE
Sbjct: 121 FITAMDSLKLNMVAVDQVHPLLSDLAASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 210
           LTEQQARQLHFDLESSYNSFMAALPTAGT
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 209

[Close]
BLAST of CsaV3_6G049840 vs. ExPASy TrEMBL
Match: A0A5D3CMS3 (Vacuolar protein sorting-associated protein 28 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007210 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.1e-108
Identity = 207/209 (99.04%), Postives = 208/209 (99.52%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYE ECFKLIAHFKTLA
Sbjct: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYETECFKLIAHFKTLA 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN
Sbjct: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FITAMDSLKLNMVAVDQVHPLLSDL+ASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE
Sbjct: 121 FITAMDSLKLNMVAVDQVHPLLSDLAASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 210
           LTEQQARQLHFDLESSYNSFMAALPTAGT
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 209

[Close]
BLAST of CsaV3_6G049840 vs. ExPASy TrEMBL
Match: A0A6J1IJT1 (Vacuolar protein sorting-associated protein 28 homolog OS=Cucurbita maxima OX=3661 GN=LOC111478075 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106
Identity = 203/209 (97.13%), Postives = 207/209 (99.04%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAY+RDIISSSDYE ECFKLIAHFKTLA
Sbjct: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYVRDIISSSDYETECFKLIAHFKTLA 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           STLKDTVPSIERFADTYKMDCPAAINRLVI+GVPATVEHRA+AAAS+TTSAAIVAECVQN
Sbjct: 61  STLKDTVPSIERFADTYKMDCPAAINRLVISGVPATVEHRASAAASSTTSAAIVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FITAMDSLKLNMVAVDQVHPLLSDL ASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE
Sbjct: 121 FITAMDSLKLNMVAVDQVHPLLSDLFASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 210
           LTEQQARQLHFDLESSYNSFMAALPTAGT
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 209

[Close]
BLAST of CsaV3_6G049840 vs. ExPASy TrEMBL
Match: A0A6J1GE20 (Vacuolar protein sorting-associated protein 28 homolog OS=Cucurbita moschata OX=3662 GN=LOC111453341 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.5e-106
Identity = 202/209 (96.65%), Postives = 206/209 (98.56%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAY+RDII SSDYE ECFKLIAHFKTLA
Sbjct: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYVRDIIPSSDYETECFKLIAHFKTLA 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           STLKDTVPSIERFADTYKMDCPAAINRLVI+GVPATVEHRA+AAAS+TTSAAIVAECVQN
Sbjct: 61  STLKDTVPSIERFADTYKMDCPAAINRLVISGVPATVEHRASAAASSTTSAAIVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FITAMDSLKLNMVAVDQVHPLLSDL ASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE
Sbjct: 121 FITAMDSLKLNMVAVDQVHPLLSDLFASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 210
           LTEQQARQLHFDLESSYNSFMAALPTAGT
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPTAGT 209

[Close]
BLAST of CsaV3_6G049840 vs. TAIR 10
Match: AT4G05000.1 (Vacuolar protein sorting-associated protein VPS28 family protein )

HSP 1 Score: 354.8 bits (909), Expect = 4.9e-98
Identity = 179/208 (86.06%), Postives = 197/208 (94.71%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMY+NFAEL+AIIKATEKLEKAYIRD+I+ S+YE+EC KLI HFKTL+
Sbjct: 2   MEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLS 61

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           +TLKDTVP+IERFADTYKMDCPAA+ RLV +G+PATVEHRA  AAS + SA+IVAECVQN
Sbjct: 62  ATLKDTVPNIERFADTYKMDCPAALYRLVTSGLPATVEHRATVAASTSNSASIVAECVQN 121

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FIT+MDSLKLNMVAVDQV+PLLSDLSASLNKL+ILPPDFEGKTKMKEWL RLSKMGAADE
Sbjct: 122 FITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKTKMKEWLSRLSKMGAADE 181

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAG 209
           LTEQQ+RQLHFDLESSYNSFMAALP AG
Sbjct: 182 LTEQQSRQLHFDLESSYNSFMAALPKAG 209

[Close]
BLAST of CsaV3_6G049840 vs. TAIR 10
Match: AT4G05000.2 (Vacuolar protein sorting-associated protein VPS28 family protein )

HSP 1 Score: 354.8 bits (909), Expect = 4.9e-98
Identity = 179/208 (86.06%), Postives = 197/208 (94.71%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMY+NFAEL+AIIKATEKLEKAYIRD+I+ S+YE+EC KLI HFKTL+
Sbjct: 2   MEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLS 61

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           +TLKDTVP+IERFADTYKMDCPAA+ RLV +G+PATVEHRA  AAS + SA+IVAECVQN
Sbjct: 62  ATLKDTVPNIERFADTYKMDCPAALYRLVTSGLPATVEHRATVAASTSNSASIVAECVQN 121

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FIT+MDSLKLNMVAVDQV+PLLSDLSASLNKL+ILPPDFEGKTKMKEWL RLSKMGAADE
Sbjct: 122 FITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKTKMKEWLSRLSKMGAADE 181

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAG 209
           LTEQQ+RQLHFDLESSYNSFMAALP AG
Sbjct: 182 LTEQQSRQLHFDLESSYNSFMAALPKAG 209

[Close]
BLAST of CsaV3_6G049840 vs. TAIR 10
Match: AT4G21560.1 (vacuolar protein sorting-associated protein 28 homolog 1 )

HSP 1 Score: 348.6 bits (893), Expect = 3.5e-96
Identity = 177/208 (85.10%), Postives = 196/208 (94.23%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMY+NFAELYAIIKATEKLEKAYIRD+IS S+YE EC KLI HFKTL+
Sbjct: 1   MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLS 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           ++LKD VP+IERFA+TYKMDC AA+ RLV +GVPATVEHRAAA+AS ++SA++VAECVQN
Sbjct: 61  ASLKDMVPNIERFAETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FIT+MDSLKLNMVAVDQV+PLLSDLSASLNKL+ILPPDFEGK KMKEWL RLSKMGA+DE
Sbjct: 121 FITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKIKMKEWLLRLSKMGASDE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAG 209
           LTEQQARQLHFDLESSYNSFMAALP AG
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPNAG 208

[Close]
BLAST of CsaV3_6G049840 vs. TAIR 10
Match: AT4G21560.2 (vacuolar protein sorting-associated protein 28 homolog 1 )

HSP 1 Score: 348.6 bits (893), Expect = 3.5e-96
Identity = 177/208 (85.10%), Postives = 196/208 (94.23%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMY+NFAELYAIIKATEKLEKAYIRD+IS S+YE EC KLI HFKTL+
Sbjct: 1   MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLS 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           ++LKD VP+IERFA+TYKMDC AA+ RLV +GVPATVEHRAAA+AS ++SA++VAECVQN
Sbjct: 61  ASLKDMVPNIERFAETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FIT+MDSLKLNMVAVDQV+PLLSDLSASLNKL+ILPPDFEGK KMKEWL RLSKMGA+DE
Sbjct: 121 FITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKIKMKEWLLRLSKMGASDE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAG 209
           LTEQQARQLHFDLESSYNSFMAALP AG
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPNAG 208

[Close]
BLAST of CsaV3_6G049840 vs. TAIR 10
Match: AT4G21560.3 (vacuolar protein sorting-associated protein 28 homolog 1 )

HSP 1 Score: 348.6 bits (893), Expect = 3.5e-96
Identity = 177/208 (85.10%), Postives = 196/208 (94.23%), Query Frame = 0 

Query: 1   MEVKLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLA 60
           MEVKLWNDKREREMY+NFAELYAIIKATEKLEKAYIRD+IS S+YE EC KLI HFKTL+
Sbjct: 1   MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLS 60

Query: 61  STLKDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQN 120
           ++LKD VP+IERFA+TYKMDC AA+ RLV +GVPATVEHRAAA+AS ++SA++VAECVQN
Sbjct: 61  ASLKDMVPNIERFAETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQN 120

Query: 121 FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLTILPPDFEGKTKMKEWLGRLSKMGAADE 180
           FIT+MDSLKLNMVAVDQV+PLLSDLSASLNKL+ILPPDFEGK KMKEWL RLSKMGA+DE
Sbjct: 121 FITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKIKMKEWLLRLSKMGASDE 180

Query: 181 LTEQQARQLHFDLESSYNSFMAALPTAG 209
           LTEQQARQLHFDLESSYNSFMAALP AG
Sbjct: 181 LTEQQARQLHFDLESSYNSFMAALPNAG 208

The following BLAST results are available for this feature:
BLAST of CsaV3_6G049840 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004134727.11.3e-108100.00vacuolar protein sorting-associated protein 28 homolog 2 [Cucumis sativus] >KGN4... [more]
XP_038883329.13.8e-10899.52vacuolar protein sorting-associated protein 28 homolog 2 [Benincasa hispida] >XP... [more]
XP_008439898.18.4e-10899.04PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2 [Cucumis mel... [more]
XP_022977932.13.5e-10697.13vacuolar protein sorting-associated protein 28 homolog 2 [Cucurbita maxima] >XP_... [more]
XP_023544381.11.3e-10596.65vacuolar protein sorting-associated protein 28 homolog 2 isoform X1 [Cucurbita p... [more]
BLAST of CsaV3_6G049840 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9S9T76.9e-9786.06Vacuolar protein sorting-associated protein 28 homolog 2 OS=Arabidopsis thaliana... [more]
O654215.0e-9585.10Vacuolar protein sorting-associated protein 28 homolog 1 OS=Arabidopsis thaliana... [more]
Q54NF11.2e-5153.69Vacuolar protein sorting-associated protein 28 OS=Dictyostelium discoideum OX=44... [more]
Q9V3599.5e-3842.50Vacuolar protein sorting-associated protein 28 homolog OS=Drosophila melanogaste... [more]
Q9UK413.1e-3640.50Vacuolar protein sorting-associated protein 28 homolog OS=Homo sapiens OX=9606 G... [more]
BLAST of CsaV3_6G049840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI076.3e-109100.00Vacuolar protein sorting-associated protein 28 homolog OS=Cucumis sativus OX=365... [more]
A0A1S3B0K84.1e-10899.04Vacuolar protein sorting-associated protein 28 homolog OS=Cucumis melo OX=3656 G... [more]
A0A5D3CMS34.1e-10899.04Vacuolar protein sorting-associated protein 28 homolog OS=Cucumis melo var. maku... [more]
A0A6J1IJT11.7e-10697.13Vacuolar protein sorting-associated protein 28 homolog OS=Cucurbita maxima OX=36... [more]
A0A6J1GE206.5e-10696.65Vacuolar protein sorting-associated protein 28 homolog OS=Cucurbita moschata OX=... [more]
BLAST of CsaV3_6G049840 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G05000.14.9e-9886.06Vacuolar protein sorting-associated protein VPS28 family protein [more]
AT4G05000.24.9e-9886.06Vacuolar protein sorting-associated protein VPS28 family protein [more]
AT4G21560.13.5e-9685.10vacuolar protein sorting-associated protein 28 homolog 1 [more]
AT4G21560.23.5e-9685.10vacuolar protein sorting-associated protein 28 homolog 1 [more]
AT4G21560.33.5e-9685.10vacuolar protein sorting-associated protein 28 homolog 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007143Vacuolar protein sorting-associated Vps28PFAMPF03997VPS28coord: 18..204
e-value: 1.1E-69
score: 234.0
IPR007143Vacuolar protein sorting-associated Vps28PIRSFPIRSF017535ESCRT1_Vps28coord: 1..205
e-value: 2.3E-80
score: 266.9
IPR007143Vacuolar protein sorting-associated Vps28PANTHERPTHR12937VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28coord: 1..208
IPR038358VPS28, N-terminal domain superfamilyGENE3D1.20.1440.200coord: 1..90
e-value: 7.3E-32
score: 111.9
IPR037206VPS28, C-terminal domain superfamilyGENE3D1.20.120.1130coord: 106..205
e-value: 6.5E-41
score: 140.3
IPR037206VPS28, C-terminal domain superfamilySUPERFAMILY140427VPS28 C-terminal domain-likecoord: 110..204
NoneNo IPR availablePANTHERPTHR12937:SF3VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1coord: 1..208
IPR017899Vacuolar protein sorting-associated, VPS28, C-terminalPROSITEPS51310VPS28_Ccoord: 109..205
score: 44.905258
IPR017898Vacuolar protein sorting-associated, VPS28, N-terminalPROSITEPS51313VPS28_Ncoord: 1..99
score: 32.813309
IPR037202ESCRT assembly domainSUPERFAMILY140111Endosomal sorting complex assembly domaincoord: 2..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G049840.1CsaV3_6G049840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032509 endosome transport via multivesicular body sorting pathway
cellular_component GO:0000813 ESCRT I complex