CsaV3_6G049570 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAACAGCATCCTTCAAGATTAAAAGCAAAACATCCGAACAGATTAAACAAATTTTGCAATTAATAGTAACGCAACTCTATAATTATATTGCTCTTCATCAATCCTCACCCATTCTTTTATTGCTGTTTTTTCTTTTTTATCCTTCCTTACCCAACCCCACCACCACCACCACCACCACCACATCCCCTCTAATAAAAACCCTAATCTTTCTTCCTTTTTTCCTTTCTAACAATGGCGGATTCGGTGGACAAGCACGACAGGGTGGTTGTTGGGAATGCCTTTCTTGCTCCTGAGGAAGATAAGCTTCTCGATGGAGTTACATTATTGGATTTCGATATGTTGTGTTCTACCGTCGCGATGCAGACCCAGGGGAAATGGCCCAACTTGGACACTACTCAAGATCCTGCTACGGCTCCTGAATTTGGTGGAGTTTTTAGGATGTGGGAAGGTGAACTACTTGATTGCTACGATGACCGCCGTATCGCTATCGAATCGGCATGGTTAGACTTTCTTAATCCACCTTTTCTTCTCTCTGTTCACCTTTTTTTAGGGTTTTTCTTTTCTTTTATATGCTCCTTCCACCAAAGGGTTCTTCTCCCTTCCTTTTGTTTTCCCTTTTAGGGAGGGGAGAGGGAAGAAGCGATTTCTTCTTAGGTTCAGTTTTCTCTGCAAAATAGAAAGGTTTTGACCACGATATTTTCCCTTTTTAGTTCGAATATGTCTCTCAGATTTCAACTAGTGAGTCTAGGAAAGTCAAATCGGTACTTTCTGTACACAAATTTTCCTCATGGTTTCGGAGTATATGTAATTGGTTGTGCTCGTCTTACGGGGGATGTATGTTATGTTTTGCCCAAGTTTGAAATTGATAATTTTCTATGAACGGGATGTTTGCTATATTTAATCTTCTTTTCACATCAAATTAATTATGTTTTTGATCTTCATGTGGTAACAGTAGCCTTTATTAATGCTGCAGCTGTCCGTGTCACAGATTTGGGAAGAATATGGGAAGGGCTGGTTTTGGCTCTTGTTTTCTTCAGGTAAATTTTTTCTTGGCTGCTTGAAAGTTTGAAAGGAGAGGAGGAAAGAAGCTAGATATTAGTTTTTTTTTTTTTTGCTCATCAATTTTTTGTAATTCATTGTATGCAGTTTTTTTAGTTTTGAATATTGTACTTTTTGCCATAACTTTGAATATCCATTTGCAGGGAACGGTTTATTTAGCTCTTGCTCTTGGTGCCCTGTGCAACTTCATTGCATTTCTGGTCACTAAACACCATTACTTTTTATATTCGGCAATTGCTTTCACCATTTCAACAGTTACATATTTGGGGTTCTTCCGCACCCAGATGAGAAGGAAATTCAATATAAGGGTGAGACGTCTTTTTCTATCAGCCTTCTGTTGTTAGCTGTTTCCTATTTCTACTTGATCATTATTGGAATGGTAACACGTTCTATTTCAAGATTGCTGAAGTTGCTATGCTCTTAATTTGTCTTTTGCCTTCTCTGAACAATTTCTTTCTTTTTTCCCGTTTAAATCGAAGTTATTGTTATTTTGGTAAGAAACTGCCCTAAAATATAGAGGCTCACACACGCACAAAAATATCCCCAACAGAAAAAAAGTGGAGTCAACCTAATTATAGAAAATGACTCCATCCCAAAAGAACAAGATTAAGCTAAGACCTGCTGAACAGCGCCCACTAAGATGCATTTAACCTAGTCACTCCCAAAATTCCTTGTCTTATCTTTCCACCTCTTTAAAAACTTTATAATTCTTCTTAGTTCAAATGTTCCACAAAAACTACATAGAAGTTTGTATACCACAAACTTTACCCTGCTCCTTGATTAGAGAACTGAACACAAATGAACACTTTGACCTATCATCCCTACTCTAGACCTAAAAGATACCAAATACTCTCTGCCAGCTCTGTAGGTGGCAAGCAAATTAACAATCTCAAATAACTGATCTAATTTCTCCTTGTGCCTCCTTTTGAGAGTGCACCATTGTACAACCTGCCATGTAAATATCCCAACCCGACCTTCTTTAGAATTACCTTCCAAAGAGAGGAATAAGTAGGAGCAACAAAGGATAGAGAAGAGGACAAAAATATGAAAAAGTGAATGGCAAGAGAAACCCTTAGAAGGATGGTGGACTAAATCCGATCTTCATGATAGTAATGGTGTCGGGGTCTTGTTAGAGTATTAAGGTATATTAGTAATTAGCTAGAAAGTTTGTTTTACTTGTTGGCTATAAATAGAAAAAGAAGGGATTGAAGAAGATAGACACTATTTTGGTGAGCAATTTAGAGTTTGTGAGTGATCTCAAGAAGGGAGGGTCCAAGTGCCTCGAATAACTTGGTTTATCTATCATATTTCAATATGTTTGGGTTTTATTACATTCCTTCTCTTAGAATAACATGCTAGTCTCGTAGAAGAGAAATTAGTCAAAGTTGTAGTTAATTTTGTGTGTAGATGGTAATAGGCGGCATATCACGGCGTTATGCTTGAATGTGCAAAAAAGGTTTAATTAAGACTAGAAGTCAAACTAGTTCCACCATCTTCCTTTTTGTTATGAGATTGTGTAACTAATAAGTTGATAGTCATAATTTGGCAAACGGAAAGCCATTGAATTTCAAATGACTAATTGTGTGTTTGTGATGGTCTTTTTATTTCTTAGGAGTAGTTGTGGGCAGAGAAAGGCTAGTGTGAGAATTTTTGTGTAGAGGGAGATTCCTACTGCAAAATTTATTAATAGTGTATAGAGAGATTCCTACTGCAAAATTTATTAATAGTGTATAGAGAGATGTGTAAGAGATAGTGTGTGTGAAAAGAGAGATTAACGACAAAGTACAATCATCGTATTTATTGATGAGAGAGTGCATTTGTTGGAAGTTGGAGAAATTGTGTATTTAGAGAAGTGAAAGAGATGAAGTAAGATAAGATGAGAAAGTGTGTATGAAGGGAAGTAGAGTGAAAATAATGAAAGATTAGTAGACACTAATTAGGGAAAAAGAATGTCATGATAGATACATAGACACAATGTTTAAGCCTAATGCACCCTCCCAATCATTTTGATGTTATCATTGCTTACAAAGCTGGTGTAAATCATGTCATTTTCAATCCCATTTCTTACCATGTTTTGAAGTTACCATTTTTTGCTTCCATGTCCAGCATTCATACGTGGTTTGAAGTTAGAGCTCTTTTGTCAACTTTCTCACAATATTGTTGAATTGAAAATATGGCAGCTGTTTCTTAGTGGCTAATGTGTAGGTTAATAATTTATGTTTTAGGGAGGAGATAATTCCTTGGACGATTGCATCTACCACCTTATCTGCCCCTGCTGTGCCTTATCTCAGGTCCGTCCATCAGTATTTACACATCAAAGCCTTTTATTTGTTTTCAACTTCCTACTTCCGTTATCTTGTGTAGGCAACCTAAACTAATTAATTACTCAACCATCGCTAATATATTGTCAATGTGGAGCAGGAATCACGAACGCTGGAAATGAATAACGTTCAAGATGGCACATGGCATGGTCGGGGTGACACAATATGTATTGGTAGTTATGGTGATGCCAGTCGATTTGTGGAGCTAAACCCACCTCTTCCTGTCTCAACCAAATTGCCTGAAGCCTGTGGCACTCTAAAGGATGTGGCGAATCAAAATCACTCTTGAATTTGTGCGTGCATGTAGCAAAACCTCGGTAGCTCTGCCTACCACGTGCTTTCGAGATTCTTCATCTGATTTATACCAAAGGTAACCGGGACACTGTCATGTTTCAGCAACTGTGCCTTCAAGTGATGAAGGCCAAAATTGGAGTTGCTGCTTTACGCTTGGGGTGTTACCTCCTACAATTGGTTAGGCTACTTTGATGCAATGGAGATGTGGTTTTGGAGGTTTGGGGGGGGGGGG ATGGCGGATTCGGTGGACAAGCACGACAGGGTGGTTGTTGGGAATGCCTTTCTTGCTCCTGAGGAAGATAAGCTTCTCGATGGAGTTACATTATTGGATTTCGATATGTTGTGTTCTACCGTCGCGATGCAGACCCAGGGGAAATGGCCCAACTTGGACACTACTCAAGATCCTGCTACGGCTCCTGAATTTGGTGGAGTTTTTAGGATGTGGGAAGGTGAACTACTTGATTGCTACGATGACCGCCGTATCGCTATCGAATCGGCATGCTGTCCGTGTCACAGATTTGGGAAGAATATGGGAAGGGCTGGTTTTGGCTCTTGTTTTCTTCAGGGAACGGTTTATTTAGCTCTTGCTCTTGGTGCCCTGTGCAACTTCATTGCATTTCTGGTCACTAAACACCATTACTTTTTATATTCGGCAATTGCTTTCACCATTTCAACAGTTACATATTTGGGGTTCTTCCGCACCCAGATGAGAAGGAAATTCAATATAAGGGGAGGAGATAATTCCTTGGACGATTGCATCTACCACCTTATCTGCCCCTGCTGTGCCTTATCTCAGGAATCACGAACGCTGGAAATGAATAACGTTCAAGATGGCACATGGCATGGTCGGGGTGACACAATATGTATTGGTAGTTATGGTGATGCCAGTCGATTTGTGGAGCTAAACCCACCTCTTCCTGTCTCAACCAAATTGCCTGAAGCCTGTGGCACTCTAAAGGATGTGGCGAATCAAAATCACTCTTGA ATGGCGGATTCGGTGGACAAGCACGACAGGGTGGTTGTTGGGAATGCCTTTCTTGCTCCTGAGGAAGATAAGCTTCTCGATGGAGTTACATTATTGGATTTCGATATGTTGTGTTCTACCGTCGCGATGCAGACCCAGGGGAAATGGCCCAACTTGGACACTACTCAAGATCCTGCTACGGCTCCTGAATTTGGTGGAGTTTTTAGGATGTGGGAAGGTGAACTACTTGATTGCTACGATGACCGCCGTATCGCTATCGAATCGGCATGCTGTCCGTGTCACAGATTTGGGAAGAATATGGGAAGGGCTGGTTTTGGCTCTTGTTTTCTTCAGGGAACGGTTTATTTAGCTCTTGCTCTTGGTGCCCTGTGCAACTTCATTGCATTTCTGGTCACTAAACACCATTACTTTTTATATTCGGCAATTGCTTTCACCATTTCAACAGTTACATATTTGGGGTTCTTCCGCACCCAGATGAGAAGGAAATTCAATATAAGGGGAGGAGATAATTCCTTGGACGATTGCATCTACCACCTTATCTGCCCCTGCTGTGCCTTATCTCAGGAATCACGAACGCTGGAAATGAATAACGTTCAAGATGGCACATGGCATGGTCGGGGTGACACAATATGTATTGGTAGTTATGGTGATGCCAGTCGATTTGTGGAGCTAAACCCACCTCTTCCTGTCTCAACCAAATTGCCTGAAGCCTGTGGCACTCTAAAGGATGTGGCGAATCAAAATCACTCTTGA MADSVDKHDRVVVGNAFLAPEEDKLLDGVTLLDFDMLCSTVAMQTQGKWPNLDTTQDPATAPEFGGVFRMWEGELLDCYDDRRIAIESACCPCHRFGKNMGRAGFGSCFLQGTVYLALALGALCNFIAFLVTKHHYFLYSAIAFTISTVTYLGFFRTQMRRKFNIRGGDNSLDDCIYHLICPCCALSQESRTLEMNNVQDGTWHGRGDTICIGSYGDASRFVELNPPLPVSTKLPEACGTLKDVANQNHS* Homology
BLAST of CsaV3_6G049570 vs. NCBI nr
Match: XP_004134741.1 (cell number regulator 5 [Cucumis sativus] >KGN49171.1 hypothetical protein Csa_002709 [Cucumis sativus]) HSP 1 Score: 531.9 bits (1369), Expect = 2.9e-147 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. NCBI nr
Match: XP_008439930.1 (PREDICTED: uncharacterized protein LOC103484568 [Cucumis melo]) HSP 1 Score: 491.9 bits (1265), Expect = 3.3e-135 Identity = 232/250 (92.80%), Postives = 238/250 (95.20%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. NCBI nr
Match: XP_038883663.1 (protein PLANT CADMIUM RESISTANCE 11 [Benincasa hispida]) HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131 Identity = 226/250 (90.40%), Postives = 233/250 (93.20%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. NCBI nr
Match: XP_023544493.1 (uncharacterized protein LOC111804053 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 441.8 bits (1135), Expect = 3.9e-120 Identity = 210/250 (84.00%), Postives = 225/250 (90.00%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. NCBI nr
Match: XP_022950802.1 (protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita moschata]) HSP 1 Score: 438.3 bits (1126), Expect = 4.3e-119 Identity = 209/250 (83.60%), Postives = 222/250 (88.80%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. ExPASy Swiss-Prot
Match: Q9M815 (Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana OX=3702 GN=PCR8 PE=1 SV=2) HSP 1 Score: 63.5 bits (153), Expect = 3.8e-09 Identity = 46/142 (32.39%), Postives = 66/142 (46.48%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. ExPASy Swiss-Prot
Match: P0CW97 (Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis thaliana OX=3702 GN=PCR3 PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.0e-06 Identity = 38/126 (30.16%), Postives = 55/126 (43.65%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. ExPASy Swiss-Prot
Match: Q3EBY6 (Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis thaliana OX=3702 GN=MCA2 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.9e-06 Identity = 41/159 (25.79%), Postives = 64/159 (40.25%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. ExPASy Swiss-Prot
Match: B6SJQ0 (Cell number regulator 13 OS=Zea mays OX=4577 GN=CNR13 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 2.8e-04 Identity = 34/125 (27.20%), Postives = 52/125 (41.60%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. ExPASy TrEMBL
Match: A0A0A0KN60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516790 PE=4 SV=1) HSP 1 Score: 531.9 bits (1369), Expect = 1.4e-147 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. ExPASy TrEMBL
Match: A0A1S3AZI4 (uncharacterized protein LOC103484568 OS=Cucumis melo OX=3656 GN=LOC103484568 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.6e-135 Identity = 232/250 (92.80%), Postives = 238/250 (95.20%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. ExPASy TrEMBL
Match: A0A6J1GFW1 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111453800 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.1e-119 Identity = 209/250 (83.60%), Postives = 222/250 (88.80%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. ExPASy TrEMBL
Match: A0A6J1II90 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita maxima OX=3661 GN=LOC111477715 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 1.8e-118 Identity = 203/238 (85.29%), Postives = 215/238 (90.34%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. ExPASy TrEMBL
Match: A0A6J1CKE9 (protein PLANT CADMIUM RESISTANCE 11 OS=Momordica charantia OX=3673 GN=LOC111012258 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 5.2e-118 Identity = 206/250 (82.40%), Postives = 221/250 (88.40%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. TAIR 10
Match: AT1G11380.1 (PLAC8 family protein ) HSP 1 Score: 282.3 bits (721), Expect = 3.7e-76 Identity = 129/210 (61.43%), Postives = 166/210 (79.05%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. TAIR 10
Match: AT1G52200.1 (PLAC8 family protein ) HSP 1 Score: 63.5 bits (153), Expect = 2.7e-10 Identity = 46/142 (32.39%), Postives = 66/142 (46.48%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. TAIR 10
Match: AT5G05350.1 (PLAC8 family protein ) HSP 1 Score: 61.2 bits (147), Expect = 1.3e-09 Identity = 39/132 (29.55%), Postives = 63/132 (47.73%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. TAIR 10
Match: AT5G35525.1 (PLAC8 family protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.1e-07 Identity = 38/126 (30.16%), Postives = 55/126 (43.65%), Query Frame = 0
BLAST of CsaV3_6G049570 vs. TAIR 10
Match: AT2G17780.1 (PLAC8 family protein ) HSP 1 Score: 53.5 bits (127), Expect = 2.8e-07 Identity = 41/159 (25.79%), Postives = 64/159 (40.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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