CsaV3_6G049440 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G049440
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 28879297 .. 28879588 (+)
RNA-Seq ExpressionCsaV3_6G049440
SyntenyCsaV3_6G049440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTGTGATTCAAAGGCTAGGCATTATACAGACTACAAGTACGTAGGAAAACATTTGATTCAAAGGCTTCCCATTCATCCACATTGCTTAAAGGGCCAAACTTCATATGCTTATTCGTTAAGTTCTGTACTTTATCCGCAGACTGAAGTTGGAGAATAGCACGAGCCAAGCAGAGGAGGAAGGGATCATCTGCTGCAGTTTAGCAATCACTACAGAAATTGATCAGCCGAGAATTGGTTTTGATTTCTTTGCTCGAGACTGTTTAAGGCCATTGATTATTCTTGCTTGA

mRNA sequence

ATGACCTGTGATTCAAAGGCTAGGCATTATACAGACTACAAACTGAAGTTGGAGAATAGCACGAGCCAAGCAGAGGAGGAAGGGATCATCTGCTGCAGTTTAGCAATCACTACAGAAATTGATCAGCCGAGAATTGGTTTTGATTTCTTTGCTCGAGACTGTTTAAGGCCATTGATTATTCTTGCTTGA

Coding sequence (CDS)

ATGACCTGTGATTCAAAGGCTAGGCATTATACAGACTACAAACTGAAGTTGGAGAATAGCACGAGCCAAGCAGAGGAGGAAGGGATCATCTGCTGCAGTTTAGCAATCACTACAGAAATTGATCAGCCGAGAATTGGTTTTGATTTCTTTGCTCGAGACTGTTTAAGGCCATTGATTATTCTTGCTTGA

Protein sequence

MTCDSKARHYTDYKLKLENSTSQAEEEGIICCSLAITTEIDQPRIGFDFFARDCLRPLIILA*
Homology
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BLAST of CsaV3_6G049440 vs. NCBI nr
Match: KAE8647675.1 (hypothetical protein Csa_003142 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 2.8e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MTCDSKARHYTDYKLKLENSTSQAEEEGIICCSLAITTEIDQPRIGFDFFARDCLRPLII 60
          MTCDSKARHYTDYKLKLENSTSQAEEEGIICCSLAITTEIDQPRIGFDFFARDCLRPLII
Sbjct: 1  MTCDSKARHYTDYKLKLENSTSQAEEEGIICCSLAITTEIDQPRIGFDFFARDCLRPLII 60

Query: 61 LA 63
          LA
Sbjct: 61 LA 62

The following BLAST results are available for this feature:
BLAST of CsaV3_6G049440 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647675.12.8e-27100.00hypothetical protein Csa_003142 [Cucumis sativus][more]
BLAST of CsaV3_6G049440 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G049440 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G049440 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G049440.1CsaV3_6G049440.1mRNA