CsaV3_6G049230 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G049230
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 28792057 .. 28792367 (-)
RNA-Seq ExpressionCsaV3_6G049230
SyntenyCsaV3_6G049230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTTCCATTTCCTTTCTCAGTCCAAACTTGACTCTGTCTTTCGAATGGGATGCTTCTCTCCTTCATCTATGATATTTGATAATCGCTTATCCAAGCTGAGCATTGGGGGAGATGGATCAATTATACTCTGCTCTTTCAATGTTCAAACTTGTTCTAGCAGAAAGCCAGATAATCTAAGGGGTTAGCCAATGAGAAATCTGTTAAATCTCCATTTCAGGCAGAAAAGACTAGTAAATCATTTTTGTTGGGGTTGTTAGCGGTTATTACGTTTGCATTTTTATTGTTTGTGTTGGAGACGGGGGAGTAA

mRNA sequence

ATGACTTTCCATTTCCTTTCTCAGTCCAAACTTGACTCTGTCTTTCGAATGGGATGCTTCTCTCCTTCATCTATGATATTTGATAATCGCTTATCCAAGCTGAGCATTGGGGGAGATGGATCAATTATACTCTGCTCTTTCAATGTTCAAACTTGTTCTAGCAGAAAGCCAGATAATCTAAGGGCGGTTATTACGTTTGCATTTTTATTGTTTGTGTTGGAGACGGGGGAGTAA

Coding sequence (CDS)

ATGACTTTCCATTTCCTTTCTCAGTCCAAACTTGACTCTGTCTTTCGAATGGGATGCTTCTCTCCTTCATCTATGATATTTGATAATCGCTTATCCAAGCTGAGCATTGGGGGAGATGGATCAATTATACTCTGCTCTTTCAATGTTCAAACTTGTTCTAGCAGAAAGCCAGATAATCTAAGGGCGGTTATTACGTTTGCATTTTTATTGTTTGTGTTGGAGACGGGGGAGTAA

Protein sequence

MTFHFLSQSKLDSVFRMGCFSPSSMIFDNRLSKLSIGGDGSIILCSFNVQTCSSRKPDNLRAVITFAFLLFVLETGE*
Homology
[Close]
BLAST of CsaV3_6G049230 vs. NCBI nr
Match: KGN49131.1 (hypothetical protein Csa_003373 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 7.8e-35
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MTFHFLSQSKLDSVFRMGCFSPSSMIFDNRLSKLSIGGDGSIILCSFNVQTCSSRKPDNL 60
          MTFHFLSQSKLDSVFRMGCFSPSSMIFDNRLSKLSIGGDGSIILCSFNVQTCSSRKPDNL
Sbjct: 1  MTFHFLSQSKLDSVFRMGCFSPSSMIFDNRLSKLSIGGDGSIILCSFNVQTCSSRKPDNL 60

Query: 61 RAVITFAFLLFVLETGE 78
          RAVITFAFLLFVLETGE
Sbjct: 61 RAVITFAFLLFVLETGE 77

[Close]
BLAST of CsaV3_6G049230 vs. ExPASy TrEMBL
Match: A0A0A0KN26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514920 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.8e-35
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MTFHFLSQSKLDSVFRMGCFSPSSMIFDNRLSKLSIGGDGSIILCSFNVQTCSSRKPDNL 60
          MTFHFLSQSKLDSVFRMGCFSPSSMIFDNRLSKLSIGGDGSIILCSFNVQTCSSRKPDNL
Sbjct: 1  MTFHFLSQSKLDSVFRMGCFSPSSMIFDNRLSKLSIGGDGSIILCSFNVQTCSSRKPDNL 60

Query: 61 RAVITFAFLLFVLETGE 78
          RAVITFAFLLFVLETGE
Sbjct: 61 RAVITFAFLLFVLETGE 77

The following BLAST results are available for this feature:
BLAST of CsaV3_6G049230 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49131.17.8e-35100.00hypothetical protein Csa_003373 [Cucumis sativus][more]
BLAST of CsaV3_6G049230 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G049230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KN263.8e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514920 PE=4 SV=1[more]
BLAST of CsaV3_6G049230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G049230.1CsaV3_6G049230.1mRNA