CsaV3_6G049190 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G049190
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	CRIB domain-containing protein
Location	chr6: 28779442 .. 28780465 (-)
RNA-Seq Expression	CsaV3_6G049190
Synteny	CsaV3_6G049190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCAATGATCTGGGTTTTCTTCCATTGAAAAAAAAAAAAAAGAAAGCTTAGTATTCTGAATTTGAATGATGTATGAACAACGACTGGTGTAGTGTAGCATAATGTTAATTCTCTTTCTCCCATTAGTTTCCCTATAACAAATTGTTTGAGATCAATTTGTTGTAAGGTGATGCAATATTCCATTTTATTTTCTAAAATAAATCTCCATCGTAACTCATCTTCCCTCAACCATGTCTTCCAAAATGAAAGGAATCTACAAAAGTTTCAAATATATCACTCAAATTTTCGGTAATAATGGTATACATCTCTTGATTTCGTTTTTCTTTTATAGTTTATTGAACATATATATACTCTATCTCGAAACTCAATAGCGTTTTGATTGTAGTGGTGAAAGATCGTGAAATGGAAATCGGATATCCGACCGACGTAAAGCATGTAGCTCATATCGGATTGGATAATTCTTCTCCATCCGCTTCCGCCCCTAGTTGGGTATATATTATTATTTCTCTTTAATTTTGTTACTTTTCTTCAATTTATTTGCTCTTCTAATGTCTGAGAAATAAAACAAAACAGATGAACGAATTTAAAGGTGGTGAGGTGAGTGAACGAAGGGATTCTAGCTCAACCGCAGTAACGGCTCTCACTCATTGGTCTACTAATTCCCAAGGTTTGTAATTTTTTAAATTAATTCTATTTAGTTCTTCAAGGAGATCATTAAGATTAATCAATCATTACGAAATTTAACATAAATTAGTGTGCTTCTGTTTGATGATGGGGCAGAATTTGATATTTCAATAGGTTACCAATCGGCATCCGACTTGTCGTTGGAGCTTCCAAAGAAACCGAAGAAGAAAAGGAGTAGCAAGAATACGACAATGTCGTCGTCGTCGTCAAGAACAACGAAGTCAAAAGCTACCTGCAAAAATCCAGTGGAGCCGATCCCGAACTTTCAAATTTAGAACAATTAATAATATACGGCTAATTAGCTTTTTCAGAATTTATCAAAACTTTTTCACAAAGCG

mRNA sequence

ATGTCTTCCAAAATGAAAGGAATCTACAAAAGTTTCAAATATATCACTCAAATTTTCGGTAATAATGTGGTGAAAGATCGTGAAATGGAAATCGGATATCCGACCGACGTAAAGCATGTAGCTCATATCGGATTGGATAATTCTTCTCCATCCGCTTCCGCCCCTAGTTGGATGAACGAATTTAAAGGTGGTGAGGTGAGTGAACGAAGGGATTCTAGCTCAACCGCAGTAACGGCTCTCACTCATTGGTCTACTAATTCCCAAGAATTTGATATTTCAATAGGTTACCAATCGGCATCCGACTTGTCGTTGGAGCTTCCAAAGAAACCGAAGAAGAAAAGGAGTAGCAAGAATACGACAATGTCGTCGTCGTCGTCAAGAACAACGAAGTCAAAAGCTACCTGCAAAAATCCAGTGGAGCCGATCCCGAACTTTCAAATTTAG

Coding sequence (CDS)

ATGTCTTCCAAAATGAAAGGAATCTACAAAAGTTTCAAATATATCACTCAAATTTTCGGTAATAATGTGGTGAAAGATCGTGAAATGGAAATCGGATATCCGACCGACGTAAAGCATGTAGCTCATATCGGATTGGATAATTCTTCTCCATCCGCTTCCGCCCCTAGTTGGATGAACGAATTTAAAGGTGGTGAGGTGAGTGAACGAAGGGATTCTAGCTCAACCGCAGTAACGGCTCTCACTCATTGGTCTACTAATTCCCAAGAATTTGATATTTCAATAGGTTACCAATCGGCATCCGACTTGTCGTTGGAGCTTCCAAAGAAACCGAAGAAGAAAAGGAGTAGCAAGAATACGACAATGTCGTCGTCGTCGTCAAGAACAACGAAGTCAAAAGCTACCTGCAAAAATCCAGTGGAGCCGATCCCGAACTTTCAAATTTAG

Protein sequence

MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEFKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTTMSSSSSRTTKSKATCKNPVEPIPNFQI*

Homology

[Close]

BLAST of CsaV3_6G049190 vs. NCBI nr
Match: XP_011658160.1 (CRIB domain-containing protein RIC10 isoform X1 [Cucumis sativus] >KGN49127.1 hypothetical protein Csa_003276 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 1.2e-73
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE
Sbjct: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60

Query: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120
           FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT
Sbjct: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120

Query: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 148
           MSSSSSRTTKSKATCKNPVEPIPNFQI
Sbjct: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 147

[Close]

BLAST of CsaV3_6G049190 vs. NCBI nr
Match: XP_011658161.1 (CRIB domain-containing protein RIC10 isoform X2 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 8.3e-70
Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           MSSKMKGIYKSFKYITQIF   VVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE
Sbjct: 1   MSSKMKGIYKSFKYITQIF---VVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60

Query: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120
           FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT
Sbjct: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120

Query: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 148
           MSSSSSRTTKSKATCKNPVEPIPNFQI
Sbjct: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 144

[Close]

BLAST of CsaV3_6G049190 vs. NCBI nr
Match: XP_008439966.1 (PREDICTED: CRIB domain-containing protein RIC10-like isoform X1 [Cucumis melo])

HSP 1 Score: 271.9 bits (694), Expect = 3.2e-69
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           M+SKMKGIYKSFKYITQIFG NVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE
Sbjct: 1   MASKMKGIYKSFKYITQIFG-NVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60

Query: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120
           FKGGEVSERRDSSSTAVTAL+HWST+SQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT
Sbjct: 61  FKGGEVSERRDSSSTAVTALSHWSTHSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120

Query: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 148
           MSSSSSRTTKSKATC NPVEPIPN+QI
Sbjct: 121 MSSSSSRTTKSKATCNNPVEPIPNYQI 146

[Close]

BLAST of CsaV3_6G049190 vs. NCBI nr
Match: XP_031743714.1 (CRIB domain-containing protein RIC10 isoform X3 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 2.7e-68
Identity = 141/147 (95.92%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE
Sbjct: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60

Query: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120
           FKGGEVSERRDSSSTAVTALTHWSTNSQ      GYQSASDLSLELPKKPKKKRSSKNTT
Sbjct: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQ------GYQSASDLSLELPKKPKKKRSSKNTT 120

Query: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 148
           MSSSSSRTTKSKATCKNPVEPIPNFQI
Sbjct: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 141

[Close]

BLAST of CsaV3_6G049190 vs. NCBI nr
Match: XP_008439967.1 (PREDICTED: CRIB domain-containing protein RIC10-like isoform X2 [Cucumis melo] >TYK13061.1 CRIB domain-containing protein RIC10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67
Identity = 139/147 (94.56%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           M+SKMKGIYKSFKYITQIF   VVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE
Sbjct: 1   MASKMKGIYKSFKYITQIF---VVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60

Query: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120
           FKGGEVSERRDSSSTAVTAL+HWST+SQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT
Sbjct: 61  FKGGEVSERRDSSSTAVTALSHWSTHSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120

Query: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 148
           MSSSSSRTTKSKATC NPVEPIPN+QI
Sbjct: 121 MSSSSSRTTKSKATCNNPVEPIPNYQI 144

[Close]

BLAST of CsaV3_6G049190 vs. ExPASy Swiss-Prot
Match: Q9M0Y9 (CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.8e-17
Identity = 67/149 (44.97%), Postives = 88/149 (59.06%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           MS KMKGIYK FK I+QIF     +D E+EIG+PTDVKHVAHIG + S  S SAP WM+E
Sbjct: 1   MSMKMKGIYKGFKCISQIFAVEKERD-EIEIGFPTDVKHVAHIGWEGS--SGSAPGWMSE 60

Query: 61  FK-GGEVSERRDSSSTAVTALTHW--STNSQEFDISIGYQSASD--------LSLELPKK 120
           FK G E+   R SS +     T +  S++S +FD     +  SD          + LPK 
Sbjct: 61  FKVGAELLSPRPSSFSNARPSTSFFTSSSSTDFDQGSSQRGISDTLRDIPPVTPINLPKN 120

Query: 121 PKKKRS-SKNTTMSSSSSRTTKSKATCKN 138
            KKK S  K ++ SSSS ++++S    K+
Sbjct: 121 NKKKSSRRKKSSSSSSSPKSSRSSVLSKS 146

[Close]

BLAST of CsaV3_6G049190 vs. ExPASy Swiss-Prot
Match: Q1G3K8 (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-15
Identity = 56/137 (40.88%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 2   SSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEF 61
           S+KMK + K  +YI+Q+F     K+ EM+IG PTDVKHVAHIG D  S +A+APSWMN+F
Sbjct: 7   STKMKSLLKGLRYISQVFAIEGEKEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDF 66

Query: 62  KGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSA-SDLSLELPKKPKKKRSSKNTT 121
           K   V E       ++  L        E D S+  QS     + +LPK PK  R S +  
Sbjct: 67  KSSPVME-------SIQGL-------GEDDSSVKCQSEFGGRTRDLPKLPKSTRKSSSEK 126

Query: 122 MSSSSSRTTKSKATCKN 138
            S +  R+ K+K    N
Sbjct: 127 GSPTKERSDKTKRRTSN 129

[Close]

BLAST of CsaV3_6G049190 vs. ExPASy Swiss-Prot
Match: Q1PF35 (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana OX=3702 GN=RIC6 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-13
Identity = 50/138 (36.23%), Postives = 74/138 (53.62%), Query Frame = 0


Query: 2   SSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEF 61
           SSKMK + K  +YI+Q+F +   K+ E++IG PTDVKHVAHIG D  S +A+APSWM EF
Sbjct: 7   SSKMKSLLKGLRYISQVFESE--KEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWMTEF 66

Query: 62  KGG---EVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKN 121
             G   E +E      +++  ++ +   S++                LPK  +K  S K 
Sbjct: 67  NSGGGFESAEGVGEDDSSIKCMSEYGGRSRDLP-------------NLPKSTRKAASEKG 126

Query: 122 TTMSSSSSRTTKSKATCK 137
           +     SS  TK +++ K
Sbjct: 127 SPTKDKSSDKTKRRSSNK 129

[Close]

BLAST of CsaV3_6G049190 vs. ExPASy Swiss-Prot
Match: F4I5N6 (CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana OX=3702 GN=RIC3 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 5   MKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEFK-- 64
           +KG+ K  +YITQIF     KD++M+IG+PTDVKHVAHIG D   P+ + PSWM +FK  
Sbjct: 4   VKGLLKGLRYITQIFDEE--KDKDMQIGFPTDVKHVAHIGSD--GPATNVPSWMGDFKPQ 63

Query: 65  ---GGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPK-KKRSSKN 124
               G+V  R D+             N+ +    +G Q      L    KPK KK   K+
Sbjct: 64  ENENGQVVSRADA-------------NNNQIGEGVGLQEL----LPPTDKPKHKKTRRKS 123

Query: 125 TTMSSSSSRTTKSKATCKNPVEP 142
            T+S + S   ++ +   + ++P
Sbjct: 124 ETVSQNGSPPRRNSSASASDMQP 125

[Close]

BLAST of CsaV3_6G049190 vs. ExPASy Swiss-Prot
Match: F4IVV0 (CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.1e-11
Identity = 49/141 (34.75%), Postives = 74/141 (52.48%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           M++ MKG+ K  +YITQIF     K++EM+IG+PTDVKHVAHIG D   P+ + PSWMN+
Sbjct: 1   MATTMKGLLKGLRYITQIFDEE--KEQEMQIGFPTDVKHVAHIGSD--GPTNTTPSWMND 60

Query: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120
           FK  E  + +  S           TN +   +     S ++   E PK+  +++     +
Sbjct: 61  FKTQEHEKGQVVSRGNSNKYNPQGTNQRGAGLKELLPSNTN---EKPKQKTRRKPGGAAS 120

Query: 121 MSSSSSRTTKSKATCKNPVEP 142
            + + S   KS     +  EP
Sbjct: 121 PNHNGSPPRKSSGNAASSDEP 134

[Close]

BLAST of CsaV3_6G049190 vs. ExPASy TrEMBL
Match: A0A0A0KL87 (CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G514880 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.0e-74
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE
Sbjct: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60

Query: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120
           FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT
Sbjct: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120

Query: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 148
           MSSSSSRTTKSKATCKNPVEPIPNFQI
Sbjct: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 147

[Close]

BLAST of CsaV3_6G049190 vs. ExPASy TrEMBL
Match: A0A1S3B004 (CRIB domain-containing protein RIC10-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484596 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           M+SKMKGIYKSFKYITQIFG NVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE
Sbjct: 1   MASKMKGIYKSFKYITQIFG-NVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60

Query: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120
           FKGGEVSERRDSSSTAVTAL+HWST+SQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT
Sbjct: 61  FKGGEVSERRDSSSTAVTALSHWSTHSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120

Query: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 148
           MSSSSSRTTKSKATC NPVEPIPN+QI
Sbjct: 121 MSSSSSRTTKSKATCNNPVEPIPNYQI 146

[Close]

BLAST of CsaV3_6G049190 vs. ExPASy TrEMBL
Match: A0A5D3CMM6 (CRIB domain-containing protein RIC10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006630 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.4e-68
Identity = 139/147 (94.56%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           M+SKMKGIYKSFKYITQIF   VVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE
Sbjct: 1   MASKMKGIYKSFKYITQIF---VVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60

Query: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120
           FKGGEVSERRDSSSTAVTAL+HWST+SQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT
Sbjct: 61  FKGGEVSERRDSSSTAVTALSHWSTHSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120

Query: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 148
           MSSSSSRTTKSKATC NPVEPIPN+QI
Sbjct: 121 MSSSSSRTTKSKATCNNPVEPIPNYQI 144

[Close]

BLAST of CsaV3_6G049190 vs. ExPASy TrEMBL
Match: A0A1S3B0N0 (CRIB domain-containing protein RIC10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484596 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.4e-68
Identity = 139/147 (94.56%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           M+SKMKGIYKSFKYITQIF   VVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE
Sbjct: 1   MASKMKGIYKSFKYITQIF---VVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60

Query: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120
           FKGGEVSERRDSSSTAVTAL+HWST+SQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT
Sbjct: 61  FKGGEVSERRDSSSTAVTALSHWSTHSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120

Query: 121 MSSSSSRTTKSKATCKNPVEPIPNFQI 148
           MSSSSSRTTKSKATC NPVEPIPN+QI
Sbjct: 121 MSSSSSRTTKSKATCNNPVEPIPNYQI 144

[Close]

BLAST of CsaV3_6G049190 vs. ExPASy TrEMBL
Match: A0A6J1GEB1 (CRIB domain-containing protein RIC10-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453375 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.4e-48
Identity = 106/137 (77.37%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           MSSK+KGIYKSFKY++QIF    +KDREMEIGYPTDVKHV+HIGLDNSSPS SAPSW+ E
Sbjct: 1   MSSKLKGIYKSFKYVSQIF---AMKDREMEIGYPTDVKHVSHIGLDNSSPSGSAPSWIKE 60

Query: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLE-----LPKKPKKKRS 120
           FKGGEVSE RDSS+TAVTA++HWST SQ+FD+SIGYQSASD+SLE     LPKKPKKK+S
Sbjct: 61  FKGGEVSEGRDSSATAVTAVSHWSTPSQDFDVSIGYQSASDISLELRQPQLPKKPKKKKS 120

Query: 121 SKNTTMSSSSSRTTKSK 133
           SK+T+ SSSSS TT SK
Sbjct: 121 SKHTSSSSSSSTTTNSK 134

[Close]

BLAST of CsaV3_6G049190 vs. TAIR 10
Match: AT4G04900.1 (ROP-interactive CRIB motif-containing protein 10 )

HSP 1 Score: 89.4 bits (220), Expect = 2.7e-18
Identity = 67/149 (44.97%), Postives = 88/149 (59.06%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           MS KMKGIYK FK I+QIF     +D E+EIG+PTDVKHVAHIG + S  S SAP WM+E
Sbjct: 1   MSMKMKGIYKGFKCISQIFAVEKERD-EIEIGFPTDVKHVAHIGWEGS--SGSAPGWMSE 60

Query: 61  FK-GGEVSERRDSSSTAVTALTHW--STNSQEFDISIGYQSASD--------LSLELPKK 120
           FK G E+   R SS +     T +  S++S +FD     +  SD          + LPK 
Sbjct: 61  FKVGAELLSPRPSSFSNARPSTSFFTSSSSTDFDQGSSQRGISDTLRDIPPVTPINLPKN 120

Query: 121 PKKKRS-SKNTTMSSSSSRTTKSKATCKN 138
            KKK S  K ++ SSSS ++++S    K+
Sbjct: 121 NKKKSSRRKKSSSSSSSPKSSRSSVLSKS 146

[Close]

BLAST of CsaV3_6G049190 vs. TAIR 10
Match: AT4G28556.1 (PAK-box/P21-Rho-binding family protein )

HSP 1 Score: 84.3 bits (207), Expect = 8.7e-17
Identity = 56/137 (40.88%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 2   SSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEF 61
           S+KMK + K  +YI+Q+F     K+ EM+IG PTDVKHVAHIG D  S +A+APSWMN+F
Sbjct: 7   STKMKSLLKGLRYISQVFAIEGEKEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDF 66

Query: 62  KGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSA-SDLSLELPKKPKKKRSSKNTT 121
           K   V E       ++  L        E D S+  QS     + +LPK PK  R S +  
Sbjct: 67  KSSPVME-------SIQGL-------GEDDSSVKCQSEFGGRTRDLPKLPKSTRKSSSEK 126

Query: 122 MSSSSSRTTKSKATCKN 138
            S +  R+ K+K    N
Sbjct: 127 GSPTKERSDKTKRRTSN 129

[Close]

BLAST of CsaV3_6G049190 vs. TAIR 10
Match: AT2G20430.1 (ROP-interactive CRIB motif-containing protein 6 )

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-14
Identity = 50/138 (36.23%), Postives = 74/138 (53.62%), Query Frame = 0


Query: 2   SSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEF 61
           SSKMK + K  +YI+Q+F +   K+ E++IG PTDVKHVAHIG D  S +A+APSWM EF
Sbjct: 7   SSKMKSLLKGLRYISQVFESE--KEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWMTEF 66

Query: 62  KGG---EVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKN 121
             G   E +E      +++  ++ +   S++                LPK  +K  S K 
Sbjct: 67  NSGGGFESAEGVGEDDSSIKCMSEYGGRSRDLP-------------NLPKSTRKAASEKG 126

Query: 122 TTMSSSSSRTTKSKATCK 137
           +     SS  TK +++ K
Sbjct: 127 SPTKDKSSDKTKRRSSNK 129

[Close]

BLAST of CsaV3_6G049190 vs. TAIR 10
Match: AT1G04450.1 (ROP-interactive CRIB motif-containing protein 3 )

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 5   MKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEFK-- 64
           +KG+ K  +YITQIF     KD++M+IG+PTDVKHVAHIG D   P+ + PSWM +FK  
Sbjct: 4   VKGLLKGLRYITQIFDEE--KDKDMQIGFPTDVKHVAHIGSD--GPATNVPSWMGDFKPQ 63

Query: 65  ---GGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPK-KKRSSKN 124
               G+V  R D+             N+ +    +G Q      L    KPK KK   K+
Sbjct: 64  ENENGQVVSRADA-------------NNNQIGEGVGLQEL----LPPTDKPKHKKTRRKS 123

Query: 125 TTMSSSSSRTTKSKATCKNPVEP 142
            T+S + S   ++ +   + ++P
Sbjct: 124 ETVSQNGSPPRRNSSASASDMQP 125

[Close]

BLAST of CsaV3_6G049190 vs. TAIR 10
Match: AT2G33460.1 (ROP-interactive CRIB motif-containing protein 1 )

HSP 1 Score: 68.2 bits (165), Expect = 6.5e-12
Identity = 49/141 (34.75%), Postives = 74/141 (52.48%), Query Frame = 0


Query: 1   MSSKMKGIYKSFKYITQIFGNNVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNE 60
           M++ MKG+ K  +YITQIF     K++EM+IG+PTDVKHVAHIG D   P+ + PSWMN+
Sbjct: 1   MATTMKGLLKGLRYITQIFDEE--KEQEMQIGFPTDVKHVAHIGSD--GPTNTTPSWMND 60

Query: 61  FKGGEVSERRDSSSTAVTALTHWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTT 120
           FK  E  + +  S           TN +   +     S ++   E PK+  +++     +
Sbjct: 61  FKTQEHEKGQVVSRGNSNKYNPQGTNQRGAGLKELLPSNTN---EKPKQKTRRKPGGAAS 120

Query: 121 MSSSSSRTTKSKATCKNPVEP 142
            + + S   KS     +  EP
Sbjct: 121 PNHNGSPPRKSSGNAASSDEP 134

The following BLAST results are available for this feature:

BLAST of CsaV3_6G049190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658160.1	1.2e-73	100.00	CRIB domain-containing protein RIC10 isoform X1 [Cucumis sativus] >KGN49127.1 hy...	[more]
XP_011658161.1	8.3e-70	97.96	CRIB domain-containing protein RIC10 isoform X2 [Cucumis sativus]	[more]
XP_008439966.1	3.2e-69	95.92	PREDICTED: CRIB domain-containing protein RIC10-like isoform X1 [Cucumis melo]	[more]
XP_031743714.1	2.7e-68	95.92	CRIB domain-containing protein RIC10 isoform X3 [Cucumis sativus]	[more]
XP_008439967.1	1.7e-67	94.56	PREDICTED: CRIB domain-containing protein RIC10-like isoform X2 [Cucumis melo] >...	[more]

BLAST of CsaV3_6G049190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0Y9	3.8e-17	44.97	CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE...	[more]
Q1G3K8	1.2e-15	40.88	CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1...	[more]
Q1PF35	2.0e-13	36.23	CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana OX=3702 GN=RIC6 PE=1...	[more]
F4I5N6	1.4e-11	35.66	CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana OX=3702 GN=RIC3 PE=1...	[more]
F4IVV0	9.1e-11	34.75	CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1...	[more]

BLAST of CsaV3_6G049190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL87	6.0e-74	100.00	CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G514880 PE=4 S...	[more]
A0A1S3B004	1.5e-69	95.92	CRIB domain-containing protein RIC10-like isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3CMM6	8.4e-68	94.56	CRIB domain-containing protein RIC10-like isoform X2 OS=Cucumis melo var. makuwa...	[more]
A0A1S3B0N0	8.4e-68	94.56	CRIB domain-containing protein RIC10-like isoform X2 OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1GEB1	7.4e-48	77.37	CRIB domain-containing protein RIC10-like isoform X2 OS=Cucurbita moschata OX=36...	[more]

BLAST of CsaV3_6G049190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04900.1	2.7e-18	44.97	ROP-interactive CRIB motif-containing protein 10	[more]
AT4G28556.1	8.7e-17	40.88	PAK-box/P21-Rho-binding family protein	[more]
AT2G20430.1	1.4e-14	36.23	ROP-interactive CRIB motif-containing protein 6	[more]
AT1G04450.1	1.0e-12	35.66	ROP-interactive CRIB motif-containing protein 3	[more]
AT2G33460.1	6.5e-12	34.75	ROP-interactive CRIB motif-containing protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 30..69 e-value: 1.7E-7 score: 31.5
IPR000095	CRIB domain	PROSITE	PS50108	CRIB	coord: 31..44 score: 8.766596
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..147
None	No IPR available	PANTHER	PTHR46325:SF20	CRIB DOMAIN-CONTAINING PROTEIN RIC11	coord: 1..131
None	No IPR available	CDD	cd00132	CRIB	coord: 29..68 e-value: 1.5758E-5 score: 38.1885
IPR044510	CRIB domain-containing protein RIC1-like	PANTHER	PTHR46325	CRIB DOMAIN-CONTAINING PROTEIN RIC8	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G049190.1	CsaV3_6G049190.1	mRNA