CsaV3_6G048370 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G048370
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 28385897 .. 28386091 (-)
RNA-Seq ExpressionCsaV3_6G048370
SyntenyCsaV3_6G048370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCAAAAATGGGGCTGTGAGGCCTCACTTGATCACCACAGCGGTACAACAATCACTTCTCTCAAAGTAAAAGATGACGCAAACAAGGTGCCACCACACGAGTCATCCATCCACGTCATATATGGAGAGACGGAAAGCACGTGCGACGACCAAGTCCGTAATTTCAACTCCCGTATTCATCAACTCCTCTAA

mRNA sequence

ATGGTTCAAAAATGGGGCTGTGAGGCCTCACTTGATCACCACAGCGGTACAACAATCACTTCTCTCAAAGTAAAAGATGACGCAAACAAGGTGCCACCACACGAGTCATCCATCCACGTCATATATGGAGAGACGGAAAGCACGTGCGACGACCAAGTCCGTAATTTCAACTCCCGTATTCATCAACTCCTCTAA

Coding sequence (CDS)

ATGGTTCAAAAATGGGGCTGTGAGGCCTCACTTGATCACCACAGCGGTACAACAATCACTTCTCTCAAAGTAAAAGATGACGCAAACAAGGTGCCACCACACGAGTCATCCATCCACGTCATATATGGAGAGACGGAAAGCACGTGCGACGACCAAGTCCGTAATTTCAACTCCCGTATTCATCAACTCCTCTAA

Protein sequence

MVQKWGCEASLDHHSGTTITSLKVKDDANKVPPHESSIHVIYGETESTCDDQVRNFNSRIHQLL*
Homology
[Close]
BLAST of CsaV3_6G048370 vs. NCBI nr
Match: KGN49045.1 (hypothetical protein Csa_004003 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 8.3e-30
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MVQKWGCEASLDHHSGTTITSLKVKDDANKVPPHESSIHVIYGETESTCDDQVRNFNSRI 60
          MVQKWGCEASLDHHSGTTITSLKVKDDANKVPPHESSIHVIYGETESTCDDQVRNFNSRI
Sbjct: 1  MVQKWGCEASLDHHSGTTITSLKVKDDANKVPPHESSIHVIYGETESTCDDQVRNFNSRI 60

Query: 61 HQLL 65
          HQLL
Sbjct: 61 HQLL 64

[Close]
BLAST of CsaV3_6G048370 vs. ExPASy TrEMBL
Match: A0A0A0KH66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511360 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.0e-30
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MVQKWGCEASLDHHSGTTITSLKVKDDANKVPPHESSIHVIYGETESTCDDQVRNFNSRI 60
          MVQKWGCEASLDHHSGTTITSLKVKDDANKVPPHESSIHVIYGETESTCDDQVRNFNSRI
Sbjct: 1  MVQKWGCEASLDHHSGTTITSLKVKDDANKVPPHESSIHVIYGETESTCDDQVRNFNSRI 60

Query: 61 HQLL 65
          HQLL
Sbjct: 61 HQLL 64

The following BLAST results are available for this feature:
BLAST of CsaV3_6G048370 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49045.18.3e-30100.00hypothetical protein Csa_004003 [Cucumis sativus][more]
BLAST of CsaV3_6G048370 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G048370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KH664.0e-30100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511360 PE=4 SV=1[more]
BLAST of CsaV3_6G048370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G048370.1CsaV3_6G048370.1mRNA