CsaV3_6G048030 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G048030
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein PHR1-LIKE 2-like
Location	chr6: 28244352 .. 28249640 (-)
RNA-Seq Expression	CsaV3_6G048030
Synteny	CsaV3_6G048030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCTTCTTCTTCTTCATCACCCAACAATGGACTTCCAATTTCTCTCTAATTCATTCTTAACCCAACTCCAGATTTCATCTTCTTCCTTCCCTCGCTGATAAAAAAATCCCTTCTTTCTTCCCTTCTTTCATTCCCATTTTCACCATTTTTTTTTCTTCTTCTCCCTCTCCCCTTTTCACGACAAGGGTTATGTTTCCTAGACTTGTTAATCCCGACGGAGATATCCAGATCCATGGTCCCCGTGGTTCTGTTGCTTCTGACCTCACCCACACTCACCGTGGAGACCCTTGTCTCGTTTTGACTTCAGATCCCAAACCACGCCTCCGATGGACTGCGGATCTTCACGAGCGATTCGTCGATGCCGTTACTCAGCTCGGTGGTGCTGGCAGTCAGTGCTTCTTTCTCCATTTACTTTAATTTCTCCAGTTTTTATAAGCGTTTAGTCTCATTAATCTGGATGTTTTGTTTTTCTTCTTGTTCATCTGTTTGTTGCAATAGACGCGTTACTTGAAGTGGGCAGGCTGTTCACTCAACTAGCTTCGATTAGATTAAACTTCTTTTATTTACTTATTTTTCTTTTACTAAGAATAGCGGCGATCGTCTGCTTAGTACCTATTTTTTAGACGATTTAGTGTAGAATTTCGATTTTCGTTTTGAGTACTTTTGCATTGTGATGAATGATTGATGCGTTGAAATGAGTTGCGTTCCATCAGGATCAAGCACTGGAAAGTGGAACGCCTACATTTTAGTTCTACTATTCACTTGTGCTTACAATGTGAATGGGTTGTTTGATTCTGTTGAAAGATTCTCATTGGTGACGATCACCTAGCATTTAGCCAGGTAAAAAACTTAGTAGAAATTAGGCAACTTATGGTTGAAAAGGAAAGCATGGGTTAAGACTTTAGAGTAATGGGATGGGAGGCCAGGCTCATTCCTCTAGAGTAGTTAAATTCGGCAGATTCTTTATCGATCTTTCAAATTTCACGACTTTGTCAAAGCCATAGTAGTTCAGTTGGTCTCTAGAAATGGGGACTTTGTGCTTGAGTACTTTGAAGAATGTTCATAAATGATTGCTGTCTGGGAAGGGTATGCTTCTAATTGGATAAAAGATTGTTTAGATTTTGATGGAGGATATTTGATATTGCTGTTGTTTCATTTAAACAGTCAGGAAGAAAAATTTTAGTCTGTCTAGCTTTCAAATATTTTAAGGGTGTCACTTTGTTTTTATTTTTAAGGATTGGAATCCCTGGAACTTCTGTTTGGCTTCATTGGTTTCTTTGAGGTCCTTTTTGTTTAACTTTTGTGGTGCAGTCATTCATTTTTCTTGTTAATAAGCATACCGTTGGAACTCGGTATCTGTCCATTATTTGATAAGAAATCTATTTAGACTTTCACATAAAACCCAATCGTGAGTTTATAATTAGGATGTCAATATACCTTTAGATTTTGTATCCAACTAGATATCAACTTCATTTGATACGATGACTTTATTAAACATCATATACCTTTAAAATACAGTTTTAGACAATCTGAAATCAGATTAAAAAAAAATCTATAAACAGTTTTGATTCATTCCTAAGTAGTAGTAGTAGTATGCGTCATCATTTTCATGCTCACATATTCACTGCAACTAAGCATGACTGTAGTTGCAGTATGTTTGACTTTGTTCAAGACATGTATATGAATAAATTACCTTGCAGAAAAGTTAATGGAACCAGACATCATTTGAATGTTATTGGGTAAACTTTATACAACTTTAGGTTTTTGTAATTCGTTGTTTGAACACCTTCACTAGTTAACTTAATGATCTAGGTAGTGAGGTACATATCAAGATTCCTTCATGGTCATATCTCAGGAGCGATAATTAATGTTATTATATGTGAAATTTGCTCAACCACATAAGTTATCCTTTCTTATCATATTTACGGGTTTTGTTAGCCTTTGCCTCATAATGGAGTATCAAGGCACAGTCTGCCAGTAAGAAATCTCATCATCAGTTTGAAGATAGTTTTGTTTTCTAGTTGTGAAAATAGTTCATCTGTATACTGGTGAAGGCACATGTAAGAGTCCACAAAGATAAAATATCATCGTGATTCTATCTAGTTTTTACAGTTGAAAGTAGTTATATGAACTTAATGGGAACGACAATTTCGTCTTTATATATTTTATTTATGTGCTTAAGTTACACATAAATGTTTCAACTCCTCCAGGAAAAATATTGGATTGAAGTACAATATAACCACAAAGGAGATCGTTAAAGTTTTGACATTGTGAAACTAATGTCCACATTAACTGGTTGCTTAAATTTTGAAATGGTTTTGGTTTTTTTTTTTTAAATCCAATTCAGCCAGTCAGAAAATATTGTTATACTGTATTTATATCACAACATAATCAATGTGAATCTTTTTATAATACGGTTCGTACTGTGTGGCAGACTTGTAATGTTCAATATGTCATTGTTAAAGAGTTTTATATAAGAACTTAAAAAAAAAATCTTTATTTTTACCTTTTGTTTTGTAGTTTTTAGATCTTTTGGGATGAGAAGTAGACTTTTTCGCTATCAAAACACCCAAAGAACAACTTAGAGATAGACATAAAACCTCCGATCAAGATTGTTAGGAAGAGCAGTGTAACTGTGTTATGCACTCCAATTAAGGTCTTAAATGGTACAATCTGACAAAAATGGTTGGACTCCTGTTCTTTTCTTTGAAGATATTGTTATTTATTTTCTTTTGGAGAATGATCGACATGTTTGACCATAAGATTCGAACTTTACAAAAACCAGAATTTGTAGTGTAATCGTTAAGTTCACTTGTTGCCAGAAGCTCCAGCTTAGTTTTTTAGGCGTCTGTTTCTTTTCTTGAAATCAAAGGTTCAAATCCTCATCTCCACATTTGTTGTACTTTAAAAAAAAAAAAGCATTAGTCCATTTACTTGCAGCATAGAGAAACTTTCTTTGCATGCCTTGACTGATGGGTCTTCTGACTATCTTTCTTTTAATTTGTTTATTGGTGGGGACAAGGGTGGGGATGATATGGGTCATATTTGAATTCTAGTCAATGATCAGGGTTTGACATTTGAACACTTGGTGCAGAAGCTACTCCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGGTAATCATAATGGCATGAAAATGCATCTTTCTATGAAAGAGTTCTGATGTTGGAATTCATGGTGGATTTATTTTTATGTATGCTTGTTTCTTTATTACAGAAATACAGATTAGGTAAGCAATCTGGGAAGGATATGGGTGAGGCATCTAAAGATGGTAAGCGACACATCTCTATTTTTGTCCTTGCATACCATGCGATGTAGCCTCCATGAGTCTGCTGATGTTCAACTACGTTATTTGTGTTGGGTCATGGAGTTCTTATCCAAAAGAACTTGCTCTCCTTTCACTATCAGCATTTGCTCTTGCTACTAATTTCTGAAAGTTTTAACCTATCTAGTCAACTATTTAAATCTTTATTTATCGCTTGGTGCAATGAACATCAGGTGCATACCTTTTAGAAAGTCCAAGTACCAATAATTTCTCTCCTGACTTGCCAATTTCTGAAATGGCCGAGTAAGATAAGAGTTTTTTTCCCTCCTTTAAGATACTTGTGATAATGCCTTGAATGTTGTGTTATGAGATATCAAGTTTGTTCAAACTGTTTATAACTTAAATGTTTGTTTCAGTGGTTATGAAGTCAAGGAGGCATTAAGAGCGCAAATGGAGGTGCAAAGTAAATTGCATCTGCAAGTTGAGGTAAAATTTTCATCCTTAACATCAAAATGGAAATTGATGATTGTTCTGGACAAGACTCCACGAAGAACCAAACTTGTTAGTGAATACTGGAGTGGGTCCTAAACATAATTTTAATGGTGAAAAGGCATATAAGTTTGTGGTTTTTAGATTGCTTGCTTAGTTGATTGTCCTCATGATCGAGTATGTTTAGAATTACTGATAAAAAAACTGGCGATGGAGATTTCTGTACCTGCTGATAGGATAGGAACTTCCAAGTTCCAAGTGTTAATACTGAGACTTGGGGTCCATTCTTCAGCTAGCTTACCTTACCATCGTTGGGCAGGCAGAGAAGCACCTACAAATTCGTCAGGATGCCGAGCGAAGATATTTGGCCATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGTAGGTGCAGTTTCGGACTCAGACAGCAAGAAGTCCGAAGGACAGGATCGCAAGAGCCCGAGAAGTACTTCCATCGACCCACTTGGTTTCTACACCACGCAATCACAAGAGATGGAAAGAGTGAATGGAACAGAAGAAGTGCAGGCTAATCTTCCTTGCCAGAGGGCTGATTGTTCAACCGAAAGCTGCCTAACCTCAAATGAGAGTCCCGGGGGATTGGCTATGGAAAAATCTCCTGCTGCAAGCAAGAAAAACATGGTTAACTTGGGTTCAGCAACTGCATCTTTGATTTGGAGTGGAGCCAAGGAAGGAATACAAAATGCTAACATCATCCAAGTTAACCATCATGGCGTGTCCGGATGCGACATGTGGGGATAAAGTTCTGCAAACAAAAAAACTCATCATGATTGATGAAAAGTATGATCTATTTCCAACTCTGTAAAAAGCTCATTATTTTCCATTCATAGAATCTGGTATGAACTGCAGCATGAACATTCTCCCTACCTTGTAAACCCGAGCAGTTTAGTTCTTTGACAACTCGTCGCAAGTAGTTAGGCATTCTTTTTGCTGTTCTGGACAATTATAGTTGATTTCTGTCTGACTTTTGACAGATTTAATTCTATTATTAGGGTGTAATCAGTAATGTTATGTTGGAAACACATTCCTGTGTCACTTGTTAGTAGGTGAAATGCACATTGTCTTCCACCGATGATAGCAAAATGATTGAATATTGTGCCATTTTCACTTAGCAAGTATCCAATTATTTCTCATAC

mRNA sequence

ATGTTTCCTAGACTTGTTAATCCCGACGGAGATATCCAGATCCATGGTCCCCGTGGTTCTGTTGCTTCTGACCTCACCCACACTCACCGTGGAGACCCTTGTCTCGTTTTGACTTCAGATCCCAAACCACGCCTCCGATGGACTGCGGATCTTCACGAGCGATTCGTCGATGCCGTTACTCAGCTCGGTGGTGCTGGCAAAGCTACTCCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGAAATACAGATTAGGTAAGCAATCTGGGAAGGATATGGGTGAGGCATCTAAAGATGGTGCATACCTTTTAGAAAGTCCAAGTACCAATAATTTCTCTCCTGACTTGCCAATTTCTGAAATGGCCGATGGTTATGAAGTCAAGGAGGCATTAAGAGCGCAAATGGAGGTGCAAAGTAAATTGCATCTGCAAGTTGAGCTAGCTTACCTTACCATCGTTGGGCAGGCAGAGAAGCACCTACAAATTCGTCAGGATGCCGAGCGAAGATATTTGGCCATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGTAGGTGCAGTTTCGGACTCAGACAGCAAGAAGTCCGAAGGACAGGATCGCAAGAGCCCGAGAAGTACTTCCATCGACCCACTTGGTTTCTACACCACGCAATCACAAGAGATGGAAAGAGTGAATGGAACAGAAGAAGTGCAGGCTAATCTTCCTTGCCAGAGGGCTGATTGTTCAACCGAAAGCTGCCTAACCTCAAATGAGAGTCCCGGGGGATTGGCTATGGAAAAATCTCCTGCTGCAAGCAAGAAAAACATGGTTAACTTGGGTTCAGCAACTGCATCTTTGATTTGGAGTGGAGCCAAGGAAGGAATACAAAATGCTAACATCATCCAAGTTAACCATCATGGCGTGTCCGGATGCGACATGTGGGGATAA

Coding sequence (CDS)

ATGTTTCCTAGACTTGTTAATCCCGACGGAGATATCCAGATCCATGGTCCCCGTGGTTCTGTTGCTTCTGACCTCACCCACACTCACCGTGGAGACCCTTGTCTCGTTTTGACTTCAGATCCCAAACCACGCCTCCGATGGACTGCGGATCTTCACGAGCGATTCGTCGATGCCGTTACTCAGCTCGGTGGTGCTGGCAAAGCTACTCCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGAAATACAGATTAGGTAAGCAATCTGGGAAGGATATGGGTGAGGCATCTAAAGATGGTGCATACCTTTTAGAAAGTCCAAGTACCAATAATTTCTCTCCTGACTTGCCAATTTCTGAAATGGCCGATGGTTATGAAGTCAAGGAGGCATTAAGAGCGCAAATGGAGGTGCAAAGTAAATTGCATCTGCAAGTTGAGCTAGCTTACCTTACCATCGTTGGGCAGGCAGAGAAGCACCTACAAATTCGTCAGGATGCCGAGCGAAGATATTTGGCCATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGTAGGTGCAGTTTCGGACTCAGACAGCAAGAAGTCCGAAGGACAGGATCGCAAGAGCCCGAGAAGTACTTCCATCGACCCACTTGGTTTCTACACCACGCAATCACAAGAGATGGAAAGAGTGAATGGAACAGAAGAAGTGCAGGCTAATCTTCCTTGCCAGAGGGCTGATTGTTCAACCGAAAGCTGCCTAACCTCAAATGAGAGTCCCGGGGGATTGGCTATGGAAAAATCTCCTGCTGCAAGCAAGAAAAACATGGTTAACTTGGGTTCAGCAACTGCATCTTTGATTTGGAGTGGAGCCAAGGAAGGAATACAAAATGCTAACATCATCCAAGTTAACCATCATGGCGTGTCCGGATGCGACATGTGGGGATAA

Protein sequence

MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSTNNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKEGIQNANIIQVNHHGVSGCDMWG*

Homology

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BLAST of CsaV3_6G048030 vs. NCBI nr
Match: XP_011658094.1 (protein PHR1-LIKE 3 isoform X1 [Cucumis sativus] >KAE8647633.1 hypothetical protein Csa_003411 [Cucumis sativus])

HSP 1 Score: 644.4 bits (1661), Expect = 5.1e-181
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 322

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BLAST of CsaV3_6G048030 vs. NCBI nr
Match: KAA0025596.1 (protein PHR1-LIKE 1-like isoform X1 [Cucumis melo var. makuwa] >TYK12471.1 protein PHR1-LIKE 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 637.5 bits (1643), Expect = 6.3e-179
Identity = 319/322 (99.07%), Postives = 319/322 (99.07%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSP ASKKNMVNL SATASLIWS AKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPVASKKNMVNLDSATASLIWSDAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 322

[Close]

BLAST of CsaV3_6G048030 vs. NCBI nr
Match: XP_031743368.1 (protein PHR1-LIKE 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 636.0 bits (1639), Expect = 1.8e-178
Identity = 320/322 (99.38%), Postives = 320/322 (99.38%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAG  TPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAG-TTPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 321

[Close]

BLAST of CsaV3_6G048030 vs. NCBI nr
Match: XP_011658095.1 (protein PHR1-LIKE 3 isoform X3 [Cucumis sativus])

HSP 1 Score: 620.2 bits (1598), Expect = 1.0e-173
Identity = 313/322 (97.20%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVE         AEKHLQIRQDAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVE---------AEKHLQIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 313

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BLAST of CsaV3_6G048030 vs. NCBI nr
Match: XP_016899337.1 (PREDICTED: LOW QUALITY PROTEIN: myb family transcription factor APL-like [Cucumis melo])

HSP 1 Score: 613.2 bits (1580), Expect = 1.3e-171
Identity = 310/322 (96.27%), Postives = 310/322 (96.27%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVE         AEKHLQIRQDAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVE---------AEKHLQIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSP ASKKNMVNL SATASLIWS AKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPVASKKNMVNLDSATASLIWSDAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 313

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BLAST of CsaV3_6G048030 vs. ExPASy Swiss-Prot
Match: Q94A57 (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.2e-45
Identity = 114/238 (47.90%), Postives = 148/238 (62.18%), Query Frame = 0


Query: 31  GDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSH 90
           GD CLVLT+DPKPRLRWT +LHERFVDAVTQLGG  KATPK IMRTM VKGLTL+HLKSH
Sbjct: 30  GDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 89

Query: 91  LQKYRLGKQSGKDMGEASKDGAYLLESPSTNNFSPD---LPISEMADGYEVKEALRAQME 150
           LQK+RLG+Q+GK+  E SKD + + ES  T + S     +   E  +GY+V EALRAQME
Sbjct: 90  LQKFRLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQME 149

Query: 151 VQSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYL-AMLERACKMLADQFIVGA-VSDSD 210
           VQ +LH Q+E+         ++ LQ+R +A+ +YL ++LE+ACK   +Q    A +  + 
Sbjct: 150 VQRRLHDQLEV---------QRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEAAR 209

Query: 211 SKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLPCQRADCSTESCLTS 264
            + SE   + S  S       F  T+   M  ++       N      +CS ES LTS
Sbjct: 210 EELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTS 258

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BLAST of CsaV3_6G048030 vs. ExPASy Swiss-Prot
Match: Q8LAJ7 (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.8e-43
Identity = 113/249 (45.38%), Postives = 155/249 (62.25%), Query Frame = 0


Query: 32  DPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHL 91
           D CLVLT+DPKPRLRWT++LHERFVDAVTQLGG  KATPK IMRTM VKGLTL+HLKSHL
Sbjct: 27  DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 86

Query: 92  QKYRLGKQSGKDMGEASKDGAYLLESPSTNNFSPD---LPISEMADGYEVKEALRAQMEV 151
           QK+RLG+QS K+  + SKD + + ES  T + S     L   E  + Y+V EALRAQMEV
Sbjct: 87  QKFRLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLAAQEQNESYQVTEALRAQMEV 146

Query: 152 QSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYL-AMLERACKMLADQFIVGAVSDSDSK 211
           Q +LH Q+E+         ++ LQ+R +A+ +YL ++LE+ACK + +Q +  A +  ++ 
Sbjct: 147 QRRLHEQLEV---------QRRLQLRIEAQGKYLQSILEKACKAIEEQAV--AFAGLEAA 206

Query: 212 KSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLPCQRADCSTESCLTSNE-- 271
           + E  +     S +    G  +T       +    E+   +   + +CS ES LTS+   
Sbjct: 207 REELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELAVAIE-HKNNCSAESSLTSSTVG 263

Query: 272 SPGGLAMEK 275
           SP   A+ K
Sbjct: 267 SPVSAALMK 263

[Close]

BLAST of CsaV3_6G048030 vs. ExPASy Swiss-Prot
Match: Q9SAK5 (Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 2.3e-35
Identity = 85/175 (48.57%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 30  RGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKS 89
           +GD  LVLT+DPKPRLRWT +LHERFVDAV QLGG  KATPK IMR M VKGLTL+HLKS
Sbjct: 22  QGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKS 81

Query: 90  HLQKYRLGKQSGKDMGE-ASKDGAYLLESPSTNNFSPDLPISEMADGYEVKEALRAQMEV 149
           HLQK+RLGKQ  K+ G+ ++K+G+         N +        + G   +     QMEV
Sbjct: 82  HLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVA-------SSSGMMSRNMNEMQMEV 141

Query: 150 QSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYL-AMLERACKMLADQFIVGAVS 203
           Q +LH Q+E+         ++HLQ+R +A+ +Y+ ++LERAC+ LA + +  A +
Sbjct: 142 QRRLHEQLEV---------QRHLQLRIEAQGKYMQSILERACQTLAGENMAAATA 180

[Close]

BLAST of CsaV3_6G048030 vs. ExPASy Swiss-Prot
Match: E5L8F7 (Myb family transcription factor IPN2 OS=Lotus japonicus OX=34305 GN=IPN2 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.2e-33
Identity = 87/176 (49.43%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 30  RGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKS 89
           +GD  LVLT+DPKPRLRWT +LHERFVDAVTQLGG  KATPK IMR M VKGLTL+HLKS
Sbjct: 23  QGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKS 82

Query: 90  HLQKYRLGKQSGKDMGEAS-KDGAYLLESPSTNNFSPDLPISEMADGYEVKEALRAQMEV 149
           HLQK+RLGKQ  K+  + S KDG       S      +   S    G  + E    Q+EV
Sbjct: 83  HLQKFRLGKQPHKEFNDHSIKDGM----RASALELQRNTASSSAMIGRNMNE---MQIEV 142

Query: 150 QSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYL-AMLERACKMLADQFIVGAVSD 204
           Q +LH Q+E+         +KHLQ+R +A+ +Y+ ++LE+A + LA + +  A ++
Sbjct: 143 QRRLHEQLEV---------QKHLQLRIEAQGKYMQSILEKAYQTLAGENMASAATN 182

[Close]

BLAST of CsaV3_6G048030 vs. ExPASy Swiss-Prot
Match: Q9SQQ9 (Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.9e-33
Identity = 101/246 (41.06%), Postives = 145/246 (58.94%), Query Frame = 0


Query: 31  GDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSH 90
           GD  L+L++D KPRL+WT DLHERF++AV QLGGA KATPK IM+ M + GLTL+HLKSH
Sbjct: 34  GDSGLILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSH 93

Query: 91  LQKYRLGKQ-SGKDMGEASKDGAYLL---ESPSTNNF-SPDLPISEMAD-GYEVKEALRA 150
           LQKYRL K  +G+     +K G   +   ++P  +   S +L I    +    + EAL+ 
Sbjct: 94  LQKYRLSKNLNGQANNSFNKIGIMTMMEEKTPDADEIQSENLSIGPQPNKNSPIGEALQM 153

Query: 151 QMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYL-AMLERACKMLADQFIVGA-VS 210
           Q+EVQ +LH Q+E+         ++HLQ+R +A+ +YL ++LE+A + L  Q +  A + 
Sbjct: 154 QIEVQRRLHEQLEV---------QRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIE 213

Query: 211 DSDSKKSEGQDRKS---PRSTSIDPLGFYTTQSQEMERVNGTEEVQANLPCQRADCSTES 266
            +  + SE   + S   P S+ ++P       SQ+M         Q N P    DCS ES
Sbjct: 214 AAKVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQM---------QTNYP---PDCSLES 258

[Close]

BLAST of CsaV3_6G048030 vs. ExPASy TrEMBL
Match: A0A5A7SIG3 (Protein PHR1-LIKE 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00480 PE=3 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 3.0e-179
Identity = 319/322 (99.07%), Postives = 319/322 (99.07%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSP ASKKNMVNL SATASLIWS AKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPVASKKNMVNLDSATASLIWSDAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 322

[Close]

BLAST of CsaV3_6G048030 vs. ExPASy TrEMBL
Match: A0A0A0KL09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510300 PE=3 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 5.0e-174
Identity = 313/322 (97.20%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVE         AEKHLQIRQDAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVE---------AEKHLQIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 313

[Close]

BLAST of CsaV3_6G048030 vs. ExPASy TrEMBL
Match: A0A1S4DTK9 (LOW QUALITY PROTEIN: myb family transcription factor APL-like OS=Cucumis melo OX=3656 GN=LOC103485209 PE=3 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 6.1e-172
Identity = 310/322 (96.27%), Postives = 310/322 (96.27%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVE         AEKHLQIRQDAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVE---------AEKHLQIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSP ASKKNMVNL SATASLIWS AKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPVASKKNMVNLDSATASLIWSDAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 313

[Close]

BLAST of CsaV3_6G048030 vs. ExPASy TrEMBL
Match: A0A6J1BTB6 (protein PHR1-LIKE 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005571 PE=3 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 7.8e-159
Identity = 287/322 (89.13%), Postives = 299/322 (92.86%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPD DIQIHG RGS  SDL  THRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDSDIQIHGGRGSATSDL--THRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGA KATPKAIMRTMNVKGLTLFHLKSHLQK+RLGKQSGKDMGE SKDGAYLLESPST
Sbjct: 61  QLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKFRLGKQSGKDMGEGSKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMA+GYEVKEALRAQMEVQSKLHLQVELA LTIVGQAEKHL+IRQDAERR
Sbjct: 121 NNFSPDLPISEMAEGYEVKEALRAQMEVQSKLHLQVELADLTIVGQAEKHLRIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFI GAVSDSDSKKS+G DRKSPRS+S+DPLGFY +QSQEMER+NG
Sbjct: 181 YLAMLERACKMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSVDPLGFYASQSQEMERMNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLP QRADCSTESCLTSNESPGGL MEKSP  S+K MVNL S TASLIWS AK+
Sbjct: 241 TEEVQANLPYQRADCSTESCLTSNESPGGLTMEKSPVGSQKKMVNLDSVTASLIWSEAKD 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
            IQ+ANIIQ+NHH  SGCDMWG
Sbjct: 301 RIQDANIIQINHHSASGCDMWG 320

[Close]

BLAST of CsaV3_6G048030 vs. ExPASy TrEMBL
Match: A0A6J1GGC2 (protein PHR1-LIKE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111453659 PE=3 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.4e-155
Identity = 285/322 (88.51%), Postives = 295/322 (91.61%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHG RGSVAS+LTH+HRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGGRGSVASELTHSHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGA KATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVE         AEKHL+IRQDAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVE---------AEKHLRIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFI GAVSDSDSKKS+GQ+RKSPRS SIDPLGFY +QSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIGGAVSDSDSKKSQGQNRKSPRSFSIDPLGFYASQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQ NL  QRADCSTESCLTSNESPGGLAMEKSP ASKKNM NL S  ASLIW  AKE
Sbjct: 241 TEEVQTNLRRQRADCSTESCLTSNESPGGLAMEKSPVASKKNMANLDSENASLIWGEAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
            IQ+AN+IQVNH  +SGC+MWG
Sbjct: 301 RIQDANMIQVNHLSISGCNMWG 313

[Close]

BLAST of CsaV3_6G048030 vs. TAIR 10
Match: AT3G24120.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 187.6 bits (475), Expect = 1.6e-47
Identity = 116/238 (48.74%), Postives = 149/238 (62.61%), Query Frame = 0


Query: 31  GDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSH 90
           GD CLVLT+DPKPRLRWT +LHERFVDAVTQLGG  KATPK IMRTM VKGLTL+HLKSH
Sbjct: 30  GDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 89

Query: 91  LQKYRLGKQSGKDMGEASKDGAYLLESPSTNNFSPD---LPISEMADGYEVKEALRAQME 150
           LQK+RLG+Q+GK+  E SKD + + ES  T + S     +   E  +GY+V EALRAQME
Sbjct: 90  LQKFRLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQME 149

Query: 151 VQSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYL-AMLERACKMLADQFIVGA-VSDSD 210
           VQ +LH Q+E       GQ ++ LQ+R +A+ +YL ++LE+ACK   +Q    A +  + 
Sbjct: 150 VQRRLHDQLE------YGQVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEAAR 209

Query: 211 SKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLPCQRADCSTESCLTS 264
            + SE   + S  S       F  T+   M  ++       N      +CS ES LTS
Sbjct: 210 EELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTS 261

[Close]

BLAST of CsaV3_6G048030 vs. TAIR 10
Match: AT3G24120.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 5.1e-46
Identity = 114/238 (47.90%), Postives = 148/238 (62.18%), Query Frame = 0


Query: 31  GDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSH 90
           GD CLVLT+DPKPRLRWT +LHERFVDAVTQLGG  KATPK IMRTM VKGLTL+HLKSH
Sbjct: 30  GDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 89

Query: 91  LQKYRLGKQSGKDMGEASKDGAYLLESPSTNNFSPD---LPISEMADGYEVKEALRAQME 150
           LQK+RLG+Q+GK+  E SKD + + ES  T + S     +   E  +GY+V EALRAQME
Sbjct: 90  LQKFRLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQME 149

Query: 151 VQSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYL-AMLERACKMLADQFIVGA-VSDSD 210
           VQ +LH Q+E+         ++ LQ+R +A+ +YL ++LE+ACK   +Q    A +  + 
Sbjct: 150 VQRRLHDQLEV---------QRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEAAR 209

Query: 211 SKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLPCQRADCSTESCLTS 264
            + SE   + S  S       F  T+   M  ++       N      +CS ES LTS
Sbjct: 210 EELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTS 258

[Close]

BLAST of CsaV3_6G048030 vs. TAIR 10
Match: AT4G13640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 180.3 bits (456), Expect = 2.6e-45
Identity = 114/249 (45.78%), Postives = 155/249 (62.25%), Query Frame = 0


Query: 32  DPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHL 91
           D CLVLT+DPKPRLRWT++LHERFVDAVTQLGG  KATPK IMRTM VKGLTL+HLKSHL
Sbjct: 27  DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 86

Query: 92  QKYRLGKQSGKDMGEASKDGAYLLESPSTNNFSPD---LPISEMADGYEVKEALRAQMEV 151
           QK+RLG+QS K+  + SKD + + ES  T + S     L   E  + Y+V EALRAQMEV
Sbjct: 87  QKFRLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLAAQEQNESYQVTEALRAQMEV 146

Query: 152 QSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYL-AMLERACKMLADQFIVGAVSDSDSK 211
           Q +LH Q+E        Q ++ LQ+R +A+ +YL ++LE+ACK + +Q +  A +  ++ 
Sbjct: 147 QRRLHEQLEYT------QVQRRLQLRIEAQGKYLQSILEKACKAIEEQAV--AFAGLEAA 206

Query: 212 KSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLPCQRADCSTESCLTSNE-- 271
           + E  +     S +    G  +T       +    E+   +   + +CS ES LTS+   
Sbjct: 207 REELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELAVAIE-HKNNCSAESSLTSSTVG 266

Query: 272 SPGGLAMEK 275
           SP   A+ K
Sbjct: 267 SPVSAALMK 266

[Close]

BLAST of CsaV3_6G048030 vs. TAIR 10
Match: AT4G13640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-44
Identity = 113/249 (45.38%), Postives = 155/249 (62.25%), Query Frame = 0


Query: 32  DPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHL 91
           D CLVLT+DPKPRLRWT++LHERFVDAVTQLGG  KATPK IMRTM VKGLTL+HLKSHL
Sbjct: 27  DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 86

Query: 92  QKYRLGKQSGKDMGEASKDGAYLLESPSTNNFSPD---LPISEMADGYEVKEALRAQMEV 151
           QK+RLG+QS K+  + SKD + + ES  T + S     L   E  + Y+V EALRAQMEV
Sbjct: 87  QKFRLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLAAQEQNESYQVTEALRAQMEV 146

Query: 152 QSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYL-AMLERACKMLADQFIVGAVSDSDSK 211
           Q +LH Q+E+         ++ LQ+R +A+ +YL ++LE+ACK + +Q +  A +  ++ 
Sbjct: 147 QRRLHEQLEV---------QRRLQLRIEAQGKYLQSILEKACKAIEEQAV--AFAGLEAA 206

Query: 212 KSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLPCQRADCSTESCLTSNE-- 271
           + E  +     S +    G  +T       +    E+   +   + +CS ES LTS+   
Sbjct: 207 REELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELAVAIE-HKNNCSAESSLTSSTVG 263

Query: 272 SPGGLAMEK 275
           SP   A+ K
Sbjct: 267 SPVSAALMK 263

[Close]

BLAST of CsaV3_6G048030 vs. TAIR 10
Match: AT1G79430.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-36
Identity = 85/175 (48.57%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 30  RGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKS 89
           +GD  LVLT+DPKPRLRWT +LHERFVDAV QLGG  KATPK IMR M VKGLTL+HLKS
Sbjct: 22  QGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKS 81

Query: 90  HLQKYRLGKQSGKDMGE-ASKDGAYLLESPSTNNFSPDLPISEMADGYEVKEALRAQMEV 149
           HLQK+RLGKQ  K+ G+ ++K+G+         N +        + G   +     QMEV
Sbjct: 82  HLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVA-------SSSGMMSRNMNEMQMEV 141

Query: 150 QSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYL-AMLERACKMLADQFIVGAVS 203
           Q +LH Q+E+         ++HLQ+R +A+ +Y+ ++LERAC+ LA + +  A +
Sbjct: 142 QRRLHEQLEV---------QRHLQLRIEAQGKYMQSILERACQTLAGENMAAATA 180

The following BLAST results are available for this feature:

BLAST of CsaV3_6G048030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658094.1	5.1e-181	100.00	protein PHR1-LIKE 3 isoform X1 [Cucumis sativus] >KAE8647633.1 hypothetical prot...	[more]
KAA0025596.1	6.3e-179	99.07	protein PHR1-LIKE 1-like isoform X1 [Cucumis melo var. makuwa] >TYK12471.1 prote...	[more]
XP_031743368.1	1.8e-178	99.38	protein PHR1-LIKE 3 isoform X2 [Cucumis sativus]	[more]
XP_011658095.1	1.0e-173	97.20	protein PHR1-LIKE 3 isoform X3 [Cucumis sativus]	[more]
XP_016899337.1	1.3e-171	96.27	PREDICTED: LOW QUALITY PROTEIN: myb family transcription factor APL-like [Cucumi...	[more]

BLAST of CsaV3_6G048030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94A57	7.2e-45	47.90	Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1	[more]
Q8LAJ7	1.8e-43	45.38	Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1	[more]
Q9SAK5	2.3e-35	48.57	Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 ...	[more]
E5L8F7	2.2e-33	49.43	Myb family transcription factor IPN2 OS=Lotus japonicus OX=34305 GN=IPN2 PE=1 SV...	[more]
Q9SQQ9	2.9e-33	41.06	Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1	[more]

BLAST of CsaV3_6G048030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SIG3	3.0e-179	99.07	Protein PHR1-LIKE 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0KL09	5.0e-174	97.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510300 PE=3 SV=1	[more]
A0A1S4DTK9	6.1e-172	96.27	LOW QUALITY PROTEIN: myb family transcription factor APL-like OS=Cucumis melo OX...	[more]
A0A6J1BTB6	7.8e-159	89.13	protein PHR1-LIKE 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110055...	[more]
A0A6J1GGC2	1.4e-155	88.51	protein PHR1-LIKE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111453659 PE=3 SV=1	[more]

BLAST of CsaV3_6G048030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24120.2	1.6e-47	48.74	Homeodomain-like superfamily protein	[more]
AT3G24120.1	5.1e-46	47.90	Homeodomain-like superfamily protein	[more]
AT4G13640.2	2.6e-45	45.78	Homeodomain-like superfamily protein	[more]
AT4G13640.1	1.3e-44	45.38	Homeodomain-like superfamily protein	[more]
AT1G79430.2	1.7e-36	48.57	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 42..97 e-value: 3.5E-23 score: 79.7
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 137..191 e-value: 3.1E-11 score: 42.8
None	No IPR available	GENE3D	1.10.10.60		coord: 41..99 e-value: 3.3E-29 score: 102.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31499:SF55	MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 18..316
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 45..95 e-value: 8.6E-6 score: 25.9
IPR044848	PHR1-like	PANTHER	PTHR31499	MYB FAMILY TRANSCRIPTION FACTOR PHL11	coord: 18..316
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 42..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G048030.1	CsaV3_6G048030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity