CsaV3_6G047020 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G047020
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Zinc finger protein
Location	chr6: 27742660 .. 27746552 (+)
RNA-Seq Expression	CsaV3_6G047020
Synteny	CsaV3_6G047020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGTGACAAAATGAATGGAAGTATAGTCAATAATTATAAATTTACTACACAGTCCTAAATTCCTAACACCTAAAATAGTCTAAAGTTAATGCCGAGGGCTCACTGGTAGTGCCGTAAAAGGCCATCGAAGCCGAAGCCCACGAAAATCCCGCGGGCAAGCTTAGCCCACACAGAGAAAAAGAAGAACCGCCGTGGTTGGTGTGTTGCTGGAGGCGGAAATTTTCGCCTTCTCCTCTCCTCTTCCCTTCGAGTACACTGGTTGTTTTTTGACCATCAGTTGAACTAATATTTTGAGCAATGGATGGAGGGAAGGAGGGGATAGAAGGAAAAGCATCGTTACAACTGGCAATGGGCGAAGGTAAAGAAGGCGATTGGGAGTGCAGTGGATGCAAGAATAGGAACTATGCTTTTCGATCCTTCTGTAATAGATGCAAACAACCTCGCCTTCTTGTCGACAATAAAACGCCTCCAGACTCCAAATGGCTTCCTCGAATCGGTGATTGGATCTGCACGGGTTAGCTTCCTATATTAACTGTACTTGTTTTTGCCCCGTTTCTTTATGCAACCTGCAAACTGTGTTGTATTCCCGACTTCGTTTTGTTGGTTTTCATAGCTGAACTTAGAATTAAACGTTTAGTTCAGAATTTTAGAGTAGCATAATTCGATTCTGTGTCTGACACTTGGTGTGGGTATTTTGTTTGAAGAATGTTCACGTGATGGAGTTTTGTTGGAACGTTTCTCTTTTCTAACATCTGAGTAGGAGTGGAGTTATCGAGTTAGGCTTATGGCTCTTACTCCAGTGAGGTTTCTTGCTTTGATAGTTTTCCACCTAAATACAATGAGCTAATAATTATTGAACATTTCCAATTTAAATCGACTAAAACTGTAGGGTGTGGTGAAGGAAAATCCCCATTGATGTGATCAGTAAATAAAATACTAATCAAGATAGCCTTAAACATCCTGTGTAATAAAATACTCATTTACTGCCAATTCAGAAAATCTGTAGTTGGAGTTGGTATACTTTACACAGCCATGTGTTATACTATGAAGAGTGAAATTGTTTTGATCTTTGGTTTGCCTGTCACTGGACTTAAATCAAAGGAATCTTCATTGCATATTTACCTCCAGTTCAAAATTTTCTTTGAGGATTGTTTTCTGCTTGCACTTTCCATTAATGTTTATATTCCAGCGAACTCATGCTTTTAGAAAAATTCTAAACTAGGTTGAGTCATGAGTCGTTTGTGTTTTTTGTATGTGTATATGGTGTGGATGGACTGCTTGGTGTGCGTATACCTGGTTTTCTTGTGGGTTGGGTTTGTCTGGCTGTGGTGCAATAGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGGTAGCAGCAATGCCAGCACTTGCAATCCCTGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAGGGAGGATTGGATTCAAAGATGAATCTTGGATTAATTGGAAATGGCACTTCACAGCATCTGCATCCCTTGAGCTCTAACTGGTCCCTGGGAGGTGCTGATAAGTATGGAATTCATGCAGCTCCAACATTTCCTTTGAGTGGAAATAATTCTGCAATCTCGTATATGAGTTTAGCTAATCAGCTCCTTTCGGTTCCAAAGGGCTGGCGGAATGGCGACTGGTTATGCAACTGTGGTTTTCATAATTATTCTTCACGTGCACAGGTGGGGTTTCCACCTTTACATACTGAGAGTTGTTTTGTACTTTTCCTATTGGTGTTTGTGGTTTCTCATTTCTGTTTACACCTGTTGTTTATCTAATTGAGCTTTGTCATATTTGCAGTGCAAGAAGTGCAATGCTTCACCACAAGGTACTTGTCCTTTCTCTTTGGTCTCTAGGTTTTGAATGGTCATTCTAGGATTTTAGCTTTAAGAGAGCACGAGGGACTATTTTAAAGTCTATGTAAGTAATAATGAAAAGGCATTGGACCTATGGCGTGTCTTGTGAGAAAGATGTTTATATTGTTTAAGCAATCCTATTTATATTCTTTGTTGTTAGTTGAATGAGTAAATTCATAGTCCAGAGTTTGTAGTAATGTCTCATAGGAGGAAATGTTGGTGGAATGGAAAAACTTAGTTGGCCTAAGGAGAGGTTGTTCTAATATCCTTGTACAAGGTGTTTCAGCTGAGAAAAGTAGAGTAGGTAGTGGAGATAAAAGTTGATTGGAATTCTAATTCTGAATGAATTTGACTTCCCCTGAGGGACATTAGACTCACCTATCTTTCTTTCCACTTCCTTTTTTTATGTATATATTTTTTGTTTGGATTATGCAGCACTTGGAATGAAACGGTTAGCATCCGAAGAACTTGTTCATCAGTGGGATAACAAGAGATTGAATATTGGACAGGTATTCCCTATGCTCAGGAGAAAAAGGATGATAATATTTTTTCGTATTTAAAGAAAATTTTCTGTTAAAATTTGGTAACTCTGATCAATGGCTTCTTCCCGTTCTTTTCTTGGCATTCAGGCAAATGAGCAACAACAATCTTACCCAGGTTTTGAGCAGATGATGGGCGCTGGTAGTGACCCAAACGTAGGATTATATAATTCTTATCCCCATGAAAGTTCTAGTGTAGCTCCAAATTTGGAAATGCCAATGCAGTTTCCTCCACAAGCAACTGCACCGACGCTCCTAGGGAAAGGGTAATATGCATTTGCTAGCCGTATTTCATTTTCTTGGCGATCGAAACAATGAGATATTCAAACCCTTTTCTTTCTGACCAAAATCGGTACCAAGACTACTGAAGTGATGAATAATAATTTATAATGCTTGACATTACCCAATATTTTAGTACCATAGAACAACTTGTTTTTTGGTTGACTATGAACTCTTCACTGATTGAGACAATTCATTCCTATCCTAACCTTATGAATCTGCAGAGCAAAGCAATGGCGCAACGGAGATTGGATGTGCACAAATTGCAATAATCATAATTATGCATCTCGCTTACACTGTAACAGGTTATCACCTAAACTAATATATTATCTGGTTGATCTTTTAACCTTTAGATCTTATAATTCAGTTGCGCCACAAGTTCTTACGTGGAAAATGGCTGATTTGTATGTTCTTCTGGTTGCTAACTTAGTAGGTTTATTGGATGTTAAATGGAGTTTGGCAGCTCGCATTGCATTTATATTGCAGGTCCATTATTGAAATGCTTTTTTGTAACAGGTGCAAGACTCAAAGAGATTCACTTTCTCTGCCCCTCAGTGCCATCTAAGAACAATTTTTCTACAGACTTGGGATGGTTTTTGTTCCTATGCTGCAAGTTTCTTTCAACCAAATTTTTGGATCTCATAATCAACTCTTCTAGTCTCCAAGGTATATTGATTGATTGTCAGTTTTCCATTACTTAGGGAAGGAGGTTTTGATGTGAATGACATTACTATTTTTGTTGAACAGTTGAGAATTTTAGTGTTGAAGCATTTATATATAATAATAATAAGATATATATATATATATATATATTTTCAGTTTTTCATATTAAATTTATCACCTTCTTGTCTCAGACGGTTGGAATAGTGGGGATTAAGTGTAAAAATAAGGCTACCAGCATGAAAACGAGCTGCAGTGTGTAACACCAAGCTTGGATTTTTCAAAGTTACTAAGTTTCATCTTTCTTTCACTGAGAAATTTAGTTTTTTGTCTCTAAATTTTGGGTCTATTTCATTTTTCTTTGAAATAATTTAATATGATTACAAGATGTTGCGAACTTACCCTTCAAATTTGAATTTTGTTTTCAATTGAATTATTAAGTTTTGTAGTTAAAAAGTGTAAATCTTGAAACTTAATTATTCAATTAAAATAAATGATTCAATTAA

mRNA sequence

ATGGATGGAGGGAAGGAGGGGATAGAAGGAAAAGCATCGTTACAACTGGCAATGGGCGAAGGTAAAGAAGGCGATTGGGAGTGCAGTGGATGCAAGAATAGGAACTATGCTTTTCGATCCTTCTGTAATAGATGCAAACAACCTCGCCTTCTTGTCGACAATAAAACGCCTCCAGACTCCAAATGGCTTCCTCGAATCGGTGATTGGATCTGCACGGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGGTAGCAGCAATGCCAGCACTTGCAATCCCTGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAGGGAGGATTGGATTCAAAGATGAATCTTGGATTAATTGGAAATGGCACTTCACAGCATCTGCATCCCTTGAGCTCTAACTGGTCCCTGGGAGGTGCTGATAAGTATGGAATTCATGCAGCTCCAACATTTCCTTTGAGTGGAAATAATTCTGCAATCTCGTATATGAGTTTAGCTAATCAGCTCCTTTCGGTTCCAAAGGGCTGGCGGAATGGCGACTGGTTATGCAACTGTGGTTTTCATAATTATTCTTCACGTGCACAGTGCAAGAAGTGCAATGCTTCACCACAAGCACTTGGAATGAAACGGTTAGCATCCGAAGAACTTGTTCATCAGTGGGATAACAAGAGATTGAATATTGGACAGGCAAATGAGCAACAACAATCTTACCCAGGTTTTGAGCAGATGATGGGCGCTGGTAGTGACCCAAACGTAGGATTATATAATTCTTATCCCCATGAAAGTTCTAGTGTAGCTCCAAATTTGGAAATGCCAATGCAGTTTCCTCCACAAGCAACTGCACCGACGCTCCTAGGGAAAGGAGCAAAGCAATGGCGCAACGGAGATTGGATGTGCACAAATTGCAATAATCATAATTATGCATCTCGCTTACACTGTAACAGGTGCAAGACTCAAAGAGATTCACTTTCTCTGCCCCTCAGTGCCATCTAA

Coding sequence (CDS)

ATGGATGGAGGGAAGGAGGGGATAGAAGGAAAAGCATCGTTACAACTGGCAATGGGCGAAGGTAAAGAAGGCGATTGGGAGTGCAGTGGATGCAAGAATAGGAACTATGCTTTTCGATCCTTCTGTAATAGATGCAAACAACCTCGCCTTCTTGTCGACAATAAAACGCCTCCAGACTCCAAATGGCTTCCTCGAATCGGTGATTGGATCTGCACGGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGGTAGCAGCAATGCCAGCACTTGCAATCCCTGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAGGGAGGATTGGATTCAAAGATGAATCTTGGATTAATTGGAAATGGCACTTCACAGCATCTGCATCCCTTGAGCTCTAACTGGTCCCTGGGAGGTGCTGATAAGTATGGAATTCATGCAGCTCCAACATTTCCTTTGAGTGGAAATAATTCTGCAATCTCGTATATGAGTTTAGCTAATCAGCTCCTTTCGGTTCCAAAGGGCTGGCGGAATGGCGACTGGTTATGCAACTGTGGTTTTCATAATTATTCTTCACGTGCACAGTGCAAGAAGTGCAATGCTTCACCACAAGCACTTGGAATGAAACGGTTAGCATCCGAAGAACTTGTTCATCAGTGGGATAACAAGAGATTGAATATTGGACAGGCAAATGAGCAACAACAATCTTACCCAGGTTTTGAGCAGATGATGGGCGCTGGTAGTGACCCAAACGTAGGATTATATAATTCTTATCCCCATGAAAGTTCTAGTGTAGCTCCAAATTTGGAAATGCCAATGCAGTTTCCTCCACAAGCAACTGCACCGACGCTCCTAGGGAAAGGAGCAAAGCAATGGCGCAACGGAGATTGGATGTGCACAAATTGCAATAATCATAATTATGCATCTCGCTTACACTGTAACAGGTGCAAGACTCAAAGAGATTCACTTTCTCTGCCCCTCAGTGCCATCTAA

Protein sequence

MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQANEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAKQWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI*

Homology

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BLAST of CsaV3_6G047020 vs. NCBI nr
Match: XP_004134868.1 (uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus] >KGN48905.1 hypothetical protein Csa_003493 [Cucumis sativus])

HSP 1 Score: 728.4 bits (1879), Expect = 2.8e-206
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180
           LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of CsaV3_6G047020 vs. NCBI nr
Match: XP_008440810.1 (PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo])

HSP 1 Score: 714.1 bits (1842), Expect = 5.6e-202
Identity = 332/340 (97.65%), Postives = 334/340 (98.24%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKAS QLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180
           LDSKMNLGLIGNGTSQHLHPLSSNWS+GGADKYGIHAAPTFPL GNNSAISYMSLANQLL
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPG EQMMG  SDPNVGLYN YPHESSSVAPNLEMP+QFPPQATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of CsaV3_6G047020 vs. NCBI nr
Match: XP_038883349.1 (uncharacterized RNA-binding protein C17H9.04c [Benincasa hispida])

HSP 1 Score: 705.3 bits (1819), Expect = 2.6e-199
Identity = 326/340 (95.88%), Postives = 332/340 (97.65%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKA+ Q  MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKAASQQTMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180
           LDSK+NLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPL GNNSAISYMSLANQLL
Sbjct: 121 LDSKINLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPGFEQMMG+ SDPNVGLYNSYPHESS+VAPNLEMPMQFPPQATAP LLGKGAK
Sbjct: 241 NEQQQSYPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMQFPPQATAPALLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRL CNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of CsaV3_6G047020 vs. NCBI nr
Match: KAA0025683.1 (putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa] >TYK12558.1 putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa])

HSP 1 Score: 687.6 bits (1773), Expect = 5.6e-194
Identity = 318/328 (96.95%), Postives = 320/328 (97.56%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKAS QLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180
           LDSKMNLGLIGNGTSQHLHPLSSNWS+GGADKYGIHAAPTFPL GNNSAISYMSLANQLL
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPG EQMMG  SDPNVGLYN YPHESSSVAPNLEMP+QFPPQATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKT 329
           QWRNGDWMCTNCNNHNYASRLHCN C T
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNSCAT 328

[Close]

BLAST of CsaV3_6G047020 vs. NCBI nr
Match: XP_022132998.1 (uncharacterized RNA-binding protein C17H9.04c [Momordica charantia])

HSP 1 Score: 660.2 bits (1702), Expect = 9.5e-186
Identity = 306/340 (90.00%), Postives = 318/340 (93.53%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEG+E KASLQ+AM EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180
           L++KMNLGLIGNGTSQ  HPLSSNW LGG DKYGIHAA TFPL GNNSAISYMS  NQ+L
Sbjct: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
            VPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ 
Sbjct: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPGFEQ++ + SD NVGLYNSY HESS VAPNLEM M FP Q+TAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRL CNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of CsaV3_6G047020 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.4e-06
Identity = 39/150 (26.00%), Postives = 64/150 (42.67%), Query Frame = 0


Query: 65  RIGDWIC--TGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSH-YFARTQGGL 124
           R GDW C   GC  +N+A    C +CG  +  AA+ A    G    +YSH  ++     +
Sbjct: 445 RAGDWKCGSEGCGYHNFAKNVCCLRCGASRATAAVVADHASGPVNGSYSHNSYSHIPPVM 504

Query: 125 DSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLLS 184
            +      +   +   ++ +++N       + G + +  F   G    +S  S+      
Sbjct: 505 STSPPNHSVYPYSQLSINSVTANHGQNFGGQNGGNVS-RFDDHGRFKEVSRPSVTTD--- 564

Query: 185 VPKGWRNGDWLCNCGFHNYSSRAQCKKCNA 212
                  GDWLC CGF N+  R+ C +CNA
Sbjct: 565 ------QGDWLCECGFTNFRRRSNCLRCNA 584

[Close]

BLAST of CsaV3_6G047020 vs. ExPASy Swiss-Prot
Match: O95218 (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 9.1e-06
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of CsaV3_6G047020 vs. ExPASy Swiss-Prot
Match: Q9R020 (Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 9.1e-06
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of CsaV3_6G047020 vs. ExPASy Swiss-Prot
Match: Q19QU3 (Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.1e-06
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of CsaV3_6G047020 vs. ExPASy Swiss-Prot
Match: Q5R580 (Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.1e-06
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of CsaV3_6G047020 vs. ExPASy TrEMBL
Match: A0A0A0KGM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505830 PE=4 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 1.4e-206
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180
           LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of CsaV3_6G047020 vs. ExPASy TrEMBL
Match: A0A1S3B1J3 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103485118 PE=4 SV=1)

HSP 1 Score: 714.1 bits (1842), Expect = 2.7e-202
Identity = 332/340 (97.65%), Postives = 334/340 (98.24%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKAS QLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180
           LDSKMNLGLIGNGTSQHLHPLSSNWS+GGADKYGIHAAPTFPL GNNSAISYMSLANQLL
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPG EQMMG  SDPNVGLYN YPHESSSVAPNLEMP+QFPPQATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of CsaV3_6G047020 vs. ExPASy TrEMBL
Match: A0A5A7SLZ2 (Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001400 PE=4 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 2.7e-194
Identity = 318/328 (96.95%), Postives = 320/328 (97.56%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKAS QLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180
           LDSKMNLGLIGNGTSQHLHPLSSNWS+GGADKYGIHAAPTFPL GNNSAISYMSLANQLL
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPG EQMMG  SDPNVGLYN YPHESSSVAPNLEMP+QFPPQATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKT 329
           QWRNGDWMCTNCNNHNYASRLHCN C T
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNSCAT 328

[Close]

BLAST of CsaV3_6G047020 vs. ExPASy TrEMBL
Match: A0A6J1BXT0 (uncharacterized RNA-binding protein C17H9.04c OS=Momordica charantia OX=3673 GN=LOC111005702 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 4.6e-186
Identity = 306/340 (90.00%), Postives = 318/340 (93.53%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEG+E KASLQ+AM EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180
           L++KMNLGLIGNGTSQ  HPLSSNW LGG DKYGIHAA TFPL GNNSAISYMS  NQ+L
Sbjct: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
            VPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ 
Sbjct: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPGFEQ++ + SD NVGLYNSY HESS VAPNLEM M FP Q+TAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRL CNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of CsaV3_6G047020 vs. ExPASy TrEMBL
Match: A0A6J1EFP4 (uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita moschata OX=3662 GN=LOC111433894 PE=4 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 5.6e-184
Identity = 308/342 (90.06%), Postives = 320/342 (93.57%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLA-MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDG KEGIE KA+ Q+A MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPA+AI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120

Query: 121 GLDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQL 180
           GLD+KMNLGL  NG  Q LHPLSSNWSLGGADKY IHA+P FPL GNNSAISYMS  NQ+
Sbjct: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQI 180

Query: 181 LSVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240
           LSVPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ
Sbjct: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240

Query: 241 ANEQQQSYPGFEQMMGAGSDPNVG-LYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKG 300
            NEQQQS+PGFEQM+G+ SDPNVG LYNSYPHESS +APNLEMPMQFP QATAPTLLGKG
Sbjct: 241 TNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRL CNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341

[Close]

BLAST of CsaV3_6G047020 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 350.5 bits (898), Expect = 1.5e-96
Identity = 175/317 (55.21%), Postives = 200/317 (63.09%), Query Frame = 0


Query: 18  MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTGCTNN 77
           MG+G+EGDWEC GC+NRNYAFRSFCNRCKQPRL++DN T P+SKWLPRIGDWICTGCTNN
Sbjct: 1   MGDGREGDWECLGCRNRNYAFRSFCNRCKQPRLIMDNNTSPNSKWLPRIGDWICTGCTNN 60

Query: 78  NYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKMNLGLIGNGTSQH 137
           NYASREKCKKCGQ KEVAA+ ALAIPGAS  T+ HYF R                G   H
Sbjct: 61  NYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTR----------------GPESH 120

Query: 138 LHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGF 197
             P                           S +++ +  NQ  SV K WR+GDW+C CGF
Sbjct: 121 DQP--------------------------GSLLAFSNATNQ-ASVHKEWRSGDWICRCGF 180

Query: 198 HNYSSRAQCKKCN-ASPQALGMKRLASEELVHQWDNKRLNIGQANEQQQSYPGFEQMMGA 257
           HNYSSR QCKKCN  +P ALG KRLASE L H+WD+KRLN G  + Q QS          
Sbjct: 181 HNYSSRIQCKKCNEIAPLALGTKRLASEALAHEWDSKRLNQGYTSMQTQS---------- 240

Query: 258 GSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAKQWRNGDWMCTNCNNHN 317
                  +Y S+P  S     N ++P+ F  Q + P LLG G KQWR+GDWMCTNC NHN
Sbjct: 241 ------AIYASFPGMSLGRVSNWQLPLPFLQQHSTPALLGMGVKQWRDGDWMCTNCKNHN 258

Query: 318 YASRLHCNRCKTQRDSL 334
           YASR  CNRCKT RD L
Sbjct: 301 YASRAECNRCKTTRDIL 258

[Close]

BLAST of CsaV3_6G047020 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 3.9e-12
Identity = 42/149 (28.19%), Postives = 60/149 (40.27%), Query Frame = 0


Query: 67  GDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKMN 126
           GDW+C  C + N+  RE C+KCG PK           G    TY +       G      
Sbjct: 6   GDWLCGACQHANFKKRESCQKCGYPK---------FGGVDVSTYLYNRTEVMAG---DWY 65

Query: 127 LGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLLSVPKGW 186
            G +  G+    H  +S  S        +     +           ++  N   + P GW
Sbjct: 66  CGALNCGS----HNYASRTSCYRCGMIKVEYTEQY------YGAQMVAYGNDGAACPPGW 125

Query: 187 RNGDWLC---NCGFHNYSSRAQCKKCNAS 213
           + GDW+C    CG HNY+SRA+C KC  +
Sbjct: 126 KTGDWVCPRVGCGVHNYASRAECFKCKTT 132

[Close]

BLAST of CsaV3_6G047020 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 8.7e-12
Identity = 60/222 (27.03%), Postives = 85/222 (38.29%), Query Frame = 0


Query: 22  KEGDWECSGCKNRNYAFRSFCNRCKQPR-------LLVDNKTPPDSKWL-------PRIG 81
           + GDW C  C + N+  R  C RC++PR       LL      P S           R G
Sbjct: 3   RPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPG 62

Query: 82  DWICT--GCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKM 141
           DW C    C  +N+A+R  C KCG  K+  +  +               A T G +D  M
Sbjct: 63  DWYCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSA--------------AATTGFMD--M 122

Query: 142 NLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLLSVPKG 201
           N+G           P    +  GG+   G          G   +                
Sbjct: 123 NVG-----------PRRGLFGFGGSSSGG---------GGTGRS---------------P 167

Query: 202 WRNGDWLC---NCGFHNYSSRAQCKKCNASPQALGMKRLASE 225
           W++GDW+C    C  HN++SR++C +CNA       K LA+E
Sbjct: 183 WKSGDWICPRSGCNEHNFASRSECFRCNAP------KELATE 167

[Close]

BLAST of CsaV3_6G047020 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.9e-07
Identity = 53/215 (24.65%), Postives = 71/215 (33.02%), Query Frame = 0


Query: 22  KEGDWECSGCKNRNYAFRSFCNRCKQPR--------LLVDN-----------KTPPDSKW 81
           + GDW C  C + N+  R  C RC   R        L   N            T  D   
Sbjct: 3   RPGDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSD--- 62

Query: 82  LPRIGDWICT--GCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 141
             R GDW CT   C  +N+ASR  C KCG  K+                           
Sbjct: 63  -VRPGDWYCTVGNCGTHNFASRSTCFKCGTFKD--------------------------- 122

Query: 142 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPT-FPLSGNNSAISYMSLANQL 201
                  G  G G             +GG   +      +  P +G  S+          
Sbjct: 123 -----ETGAGGGG-----------GGIGGPAMFDADIMRSRVPGNGGRSS---------- 154

Query: 202 LSVPKGWRNGDWLC---NCGFHNYSSRAQCKKCNA 212
                 W++GDW+C    C  HN++SR +C +CNA
Sbjct: 183 ------WKSGDWICTRIGCNEHNFASRMECFRCNA 154

[Close]

BLAST of CsaV3_6G047020 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 42.4 bits (98), Expect = 8.8e-04
Identity = 19/64 (29.69%), Postives = 30/64 (46.88%), Query Frame = 0


Query: 25  DWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTGCTNNNYASREK 84
           DW C  C   N+A    C  C +    V ++ P  +  + + GDW+C  C+  N+   + 
Sbjct: 302 DWACPKCDFVNFARNERCRECNE----VADRRPVAA--VVKEGDWLCPECSFLNFTRNQS 359

Query: 85  CKKC 89
           C KC
Sbjct: 362 CLKC 359

The following BLAST results are available for this feature:

BLAST of CsaV3_6G047020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134868.1	2.8e-206	100.00	uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus] >KGN48905.1 hypo...	[more]
XP_008440810.1	5.6e-202	97.65	PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo]	[more]
XP_038883349.1	2.6e-199	95.88	uncharacterized RNA-binding protein C17H9.04c [Benincasa hispida]	[more]
KAA0025683.1	5.6e-194	96.95	putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa] >TYK12558.1 pu...	[more]
XP_022132998.1	9.5e-186	90.00	uncharacterized RNA-binding protein C17H9.04c [Momordica charantia]	[more]

BLAST of CsaV3_6G047020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13801	2.4e-06	26.00	Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra...	[more]
O95218	9.1e-06	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=Z...	[more]
Q9R020	9.1e-06	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=...	[more]
Q19QU3	9.1e-06	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRA...	[more]
Q5R580	9.1e-06	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=Z...	[more]

BLAST of CsaV3_6G047020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGM9	1.4e-206	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505830 PE=4 SV=1	[more]
A0A1S3B1J3	2.7e-202	97.65	uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7SLZ2	2.7e-194	96.95	Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1BXT0	4.6e-186	90.00	uncharacterized RNA-binding protein C17H9.04c OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1EFP4	5.6e-184	90.06	uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of CsaV3_6G047020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17975.1	1.5e-96	55.21	zinc finger (Ran-binding) family protein	[more]
AT2G26695.1	3.9e-12	28.19	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	8.7e-12	27.03	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	2.9e-07	24.65	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G48570.1	8.8e-04	29.69	zinc finger (Ran-binding) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 67..91 e-value: 2.1E-8 score: 43.9 coord: 189..212 e-value: 1.4E-4 score: 31.2 coord: 24..48 e-value: 1.8E-6 score: 37.5 coord: 305..329 e-value: 1.3E-6 score: 38.0
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 22..49 e-value: 3.7E-7 score: 29.3 coord: 65..93 e-value: 3.0E-7 score: 29.6 coord: 303..330 e-value: 3.3E-8 score: 32.7
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 26..45
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 69..88
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 307..326
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 65..94 score: 10.116323
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 303..332 score: 10.240537
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 22..51 score: 9.946939
None	No IPR available	GENE3D	4.10.1060.10		coord: 183..214 e-value: 1.1E-7 score: 32.9 coord: 19..50 e-value: 7.6E-9 score: 36.7 coord: 298..332 e-value: 5.3E-10 score: 40.4 coord: 60..94 e-value: 2.8E-10 score: 41.3
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 184..248
None	No IPR available	PANTHER	PTHR23111:SF71	OS04G0110600 PROTEIN	coord: 20..154 coord: 289..338 coord: 184..248
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 20..154 coord: 289..338
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 185..212
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 22..50
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 297..331
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 59..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G047020.1	CsaV3_6G047020.1	mRNA