CsaV3_6G046220 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCTTCTTAAAAGAAGGGGCTCCCATAACAATGGAGAAACTGATGATCCTTCACTGCAGGATGGAAAGGTGAAGACTACTTTTAATTTCTCTTTTTTTTTTTGGCTTTTCTTCCTTTTGGATCATGATATTTTGATTGTAATGGGTTTGACTGATAGATTGGGGGCAAGATTCATGGATAGAGTCAAATTTCTAAATTTCTTTAAATGGTTATGATCTGTATTGGTCGTTGTCTTTAACAAACAGATCATTGAACTAAAAGGTGCCATGGGGAACCTATCCGGTCGCAGTATAAAGTACTGTAATGATGCATGCCTTCGGAGATATTTGGCTGCTCGGAATTGGGATCTTAACAAGGCAAAGAAAATGCTGGAGGACTCACTCAAATGGAGGGCAACTTACAAGCCCGAGGAAATCAGATGGGTTAGTTTGATCAGTCTCTAAGTTCTTTGCCTTTTAAACACTCTAAATACTCGCAGGTTTAGAATGCAGGCATAGTCTGTGTCACTTTTTAACTTTATACTCTTTATATATAGTATGAATACCATCAACAAATTTATTTTTTAGTCCGTCCAGGCTCGTTCAAGTTCAACTTACATTTTTTTGTCTTCAGTTTATTTTTACTTAATTATAGGGTCTTTTATCAACAATCGTTTTTGATCGGCCACAGTCTCTAATCTACTTTTAGGCATGAATATGCATTTTTTCCCTTCTACGTTCAGGAGGAGAGAGTCTTTGAAAACTGTTGATTTAGGGTACTTCCAGGTTGGTAATTAGAACATCAAATAAACCTTGTGTGAACTAATTAATTTCACGCAGAAAGAGGAAAAAGCTTATTCCTAGCCATTTAAATGTGAGAAAAATTCGTAATTTTCTTTTACTAATTTTACTAATCAAATCATGTCAATTACTATCAGCTTACTTCGATAAGCACCATAGACAGTAAGAGATGTGTATTAATTTTCAATAGCTCGATAAAACTTGATATGTGTATAATGCTCAAATAAAGGGGAACATTTTAGTTTATTTAGTACAGTAGACATTAAGGATGATGTTTATCAATTTTTAGGACTATATTGATTTTCTTATAAAGAAAAACACTTGAACAAATTCTAGATTACACCTATTTTTGTGCTTTTTAACTCGTAAAACCACAGTTTGCCATAGGAGTGTGATAGTGTGAGATGCCCTGCATCCAGGTATGATTTTTTGATAAAGATCACAAAACTAGGTATGTGATTTGTTGTTATAAGATGGAAGGAGACAGTTTTCTACATTTTGGCTCAAAAGTTGTCTCATAATTAATATCCATCGTGCATTTCCTTTCCATCTTGCAATCTATCTGGATTCTTGTCTACTTTCCTTTTCCTCTCATAAATATCCTTTTTCTTTTTTTTAACTCTCAATCCCCTACTCTACTCTTGCCATTGCTAACTATTTTCTTTTTACACGATTCCTGAATTAATCCTTGTGTGCTTTTGAAGTATGAGAATACATATGGTTTTGCGTCAATTTAATGTCAACCAGAACCATAGCACAACTCCGTCTAGAATATACGCTATAAAATTATTTGTTTCTATCTGCTATGGGCTCAAGAGAAAAAATAAGCTGCCCTTAATAATATAGTGAAATGCTTGTACGATTTGTCAGAATTGTAAGAGCGTCGGTATATACATGTTATATCACTGATTTGGAGCAGAAAAGCACAATGTAAAATTTCTGTTCCTTCCCATCTATTTAATGCTATAATAATAATAGTTTTGTAGTTATCTTTTCTATTCTTATCCAATAATAGTATTTAGAGAAATTGTGAATATTTTACAAAATATCTACATTTAATTAAAAAATCAAATATAATAGATTTTGTGTCAATTTTTGTATTTTGGAAAAGACTGCTTGATTTTATTCTAAATAGAATTTGTTCTAAAAGAATTTAAATTATTGTTATTACATCCTCGACTGTTGTATTTTAGTTGCCTGTTTTTCTAAAACCAAGACTATTGCCACCCTATAAGTGTTTTTCACAAACTTCGATATGGTGCAGAATGAAGTAGCACATGAAGGTGAAACAGGCAAATCTTTTAGAGCAAATTTCTACGACCGTTTCGGTCGAACAGTGCTCATATCCAGGCCAGGGATGCAGGTATTTTACTCAGACTTTCTCGTCAAAGTACAAAATCAAAATTGAGAACCAAATTTGACAAGATCATCAATGTCAGTATTTGTGTTATAAATTTCCATTCTCGTATCTGTCCAATAGATTTGTTGATTTTCAAAGACAAAGAGGGAGGTTCCACAAGACAGGGATATTGTGAGGTCTTAAGACTCCTTACTATGTTAGGAGTCACCAAGCCAAGAATTAAAATATATACGACTAGGACAAGTCCTTCGGTTCAATTCCCTCTGAGCAGTAAAGGACGTAGGGATTGATATTCCTAAGCAAGCCAAGCAGATAATATATGTTGAATAAGATAAAACTAATTAAACACAAAGTTGAAAAACTTGGAAGTCTACGTTTTAAAATTGAAACGATTAAGCACAAAAATTGGAGTTCAGATAATGCCACATTCTTTCTATGCTTTAAATATTTCTTTATAGATTCTTAAGTTTTTATTTGTTAGTTTAAAGACTACTGAGTTTTGTTATGAACGATTACTTTTTCCTATTCATTGAAGCCTAAGGTATTCACCTTTCGCTGTCGAAGCTAGTATTGGGTACAGCCCCAACATAGAGAACTTGAAATTTAATTTTTTTAAAAAAATTAATTCTATTCAGCTTGGCTTCTTTCTCAAATTATCAGAATACGAACTCGCCGGAAGACAATGTTCGACATGTGGTGTATCTTTTAGAGAACACCATTTTGAACCTTCGTAACGGCCAAGAACAGATAGCGTGGCTGATAGATTTTACTGGATTTACACTAAACACCAACATCTCTGTCAAAGCAGCAAGAGGCATTATTAACATACTGCAGAGCCACTATCCAGAAAGGCTTGCTGTTTCATTTCTCTACAATCCTCCAAGAATCTTTCAAGCCTTTTGGAAGGTTAGAGAATTATAACCCATCTTTTATCTCCATTCTTTAACTCGATTTTGGTTCTAAATTATCTCCGTATCATAGGCTATCAGGTACTTTATTGATCCAAATACAGGTCAGAAAGTAAACTTTATATACCCCAACAACAAGGACAGTGTAGAGCTGATGAAATCTTTCTTCGATATGGAAAACCTTCCAAGTGTATTTGGAGGAAAAGCCACTCTAACATATGACCATGAAGAGTTCTCAAAAATGATGGCAATGGACGACATTAAAACTGCCAAATTTTGGGAGGTAAACGATAAGCCTTCCCATAATATGAATGGGCATTCAGGCCTTGAGGTCGCACAAGAAGAGGCAATACCCATCTCCGTTTCATCAGCTTAG ATGTTTCTTCTTAAAAGAAGGGGCTCCCATAACAATGGAGAAACTGATGATCCTTCACTGCAGGATGGAAAGATCATTGAACTAAAAGGTGCCATGGGGAACCTATCCGGTCGCAGTATAAAGTACTGTAATGATGCATGCCTTCGGAGATATTTGGCTGCTCGGAATTGGGATCTTAACAAGGCAAAGAAAATGCTGGAGGACTCACTCAAATGGAGGGCAACTTACAAGCCCGAGGAAATCAGATGGAATGAAGTAGCACATGAAGGTGAAACAGGCAAATCTTTTAGAGCAAATTTCTACGACCGTTTCGGTCGAACAGTGCTCATATCCAGGCCAGGGATGCAGAATACGAACTCGCCGGAAGACAATGTTCGACATGTGGTGTATCTTTTAGAGAACACCATTTTGAACCTTCGTAACGGCCAAGAACAGATAGCGTGGCTGATAGATTTTACTGGATTTACACTAAACACCAACATCTCTGTCAAAGCAGCAAGAGGCATTATTAACATACTGCAGAGCCACTATCCAGAAAGGCTTGCTGTTTCATTTCTCTACAATCCTCCAAGAATCTTTCAAGCCTTTTGGAAGGCTATCAGGTACTTTATTGATCCAAATACAGGTCAGAAAGTAAACTTTATATACCCCAACAACAAGGACAGTGTAGAGCTGATGAAATCTTTCTTCGATATGGAAAACCTTCCAAGTGTATTTGGAGGAAAAGCCACTCTAACATATGACCATGAAGAGTTCTCAAAAATGATGGCAATGGACGACATTAAAACTGCCAAATTTTGGGAGGTAAACGATAAGCCTTCCCATAATATGAATGGGCATTCAGGCCTTGAGGTCGCACAAGAAGAGGCAATACCCATCTCCGTTTCATCAGCTTAG ATGTTTCTTCTTAAAAGAAGGGGCTCCCATAACAATGGAGAAACTGATGATCCTTCACTGCAGGATGGAAAGATCATTGAACTAAAAGGTGCCATGGGGAACCTATCCGGTCGCAGTATAAAGTACTGTAATGATGCATGCCTTCGGAGATATTTGGCTGCTCGGAATTGGGATCTTAACAAGGCAAAGAAAATGCTGGAGGACTCACTCAAATGGAGGGCAACTTACAAGCCCGAGGAAATCAGATGGAATGAAGTAGCACATGAAGGTGAAACAGGCAAATCTTTTAGAGCAAATTTCTACGACCGTTTCGGTCGAACAGTGCTCATATCCAGGCCAGGGATGCAGAATACGAACTCGCCGGAAGACAATGTTCGACATGTGGTGTATCTTTTAGAGAACACCATTTTGAACCTTCGTAACGGCCAAGAACAGATAGCGTGGCTGATAGATTTTACTGGATTTACACTAAACACCAACATCTCTGTCAAAGCAGCAAGAGGCATTATTAACATACTGCAGAGCCACTATCCAGAAAGGCTTGCTGTTTCATTTCTCTACAATCCTCCAAGAATCTTTCAAGCCTTTTGGAAGGCTATCAGGTACTTTATTGATCCAAATACAGGTCAGAAAGTAAACTTTATATACCCCAACAACAAGGACAGTGTAGAGCTGATGAAATCTTTCTTCGATATGGAAAACCTTCCAAGTGTATTTGGAGGAAAAGCCACTCTAACATATGACCATGAAGAGTTCTCAAAAATGATGGCAATGGACGACATTAAAACTGCCAAATTTTGGGAGGTAAACGATAAGCCTTCCCATAATATGAATGGGCATTCAGGCCTTGAGGTCGCACAAGAAGAGGCAATACCCATCTCCGTTTCATCAGCTTAG MFLLKRRGSHNNGETDDPSLQDGKIIELKGAMGNLSGRSIKYCNDACLRRYLAARNWDLNKAKKMLEDSLKWRATYKPEEIRWNEVAHEGETGKSFRANFYDRFGRTVLISRPGMQNTNSPEDNVRHVVYLLENTILNLRNGQEQIAWLIDFTGFTLNTNISVKAARGIINILQSHYPERLAVSFLYNPPRIFQAFWKAIRYFIDPNTGQKVNFIYPNNKDSVELMKSFFDMENLPSVFGGKATLTYDHEEFSKMMAMDDIKTAKFWEVNDKPSHNMNGHSGLEVAQEEAIPISVSSA* Homology
BLAST of CsaV3_6G046220 vs. NCBI nr
Match: XP_004143509.1 (phosphatidylinositol transfer protein 3 isoform X1 [Cucumis sativus] >XP_031743641.1 phosphatidylinositol transfer protein 3 isoform X1 [Cucumis sativus] >XP_031743642.1 phosphatidylinositol transfer protein 3 isoform X1 [Cucumis sativus] >XP_031743643.1 phosphatidylinositol transfer protein 3 isoform X1 [Cucumis sativus] >XP_031743644.1 phosphatidylinositol transfer protein 3 isoform X1 [Cucumis sativus] >XP_031743645.1 phosphatidylinositol transfer protein 3 isoform X1 [Cucumis sativus] >XP_031743646.1 phosphatidylinositol transfer protein 3 isoform X1 [Cucumis sativus] >XP_031743647.1 phosphatidylinositol transfer protein 3 isoform X1 [Cucumis sativus] >XP_031743648.1 phosphatidylinositol transfer protein 3 isoform X1 [Cucumis sativus] >KGN48826.1 hypothetical protein Csa_003400 [Cucumis sativus]) HSP 1 Score: 617.1 bits (1590), Expect = 8.1e-173 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. NCBI nr
Match: XP_008440705.1 (PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_008440706.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_016899209.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_016899210.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_016899211.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_016899212.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_016899213.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_016899214.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_016899215.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_016899216.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_016899217.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_016899218.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_016899219.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >XP_016899220.1 PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo] >KAA0036232.1 CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo var. makuwa] >TYK12627.1 CRAL-TRIO domain-containing protein C23B6.04c-like [Cucumis melo var. makuwa]) HSP 1 Score: 581.3 bits (1497), Expect = 4.9e-162 Identity = 277/297 (93.27%), Postives = 288/297 (96.97%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. NCBI nr
Match: XP_038881484.1 (phosphatidylinositol transfer protein 3-like [Benincasa hispida]) HSP 1 Score: 553.9 bits (1426), Expect = 8.4e-154 Identity = 265/298 (88.93%), Postives = 282/298 (94.63%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. NCBI nr
Match: XP_031743649.1 (CRAL-TRIO domain-containing protein C23B6.04c isoform X2 [Cucumis sativus]) HSP 1 Score: 553.5 bits (1425), Expect = 1.1e-153 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. NCBI nr
Match: KAG7034149.1 (Random slug protein 5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 536.6 bits (1381), Expect = 1.4e-148 Identity = 253/298 (84.90%), Postives = 278/298 (93.29%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. ExPASy Swiss-Prot
Match: Q9UU99 (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC23B6.04c PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.4e-26 Identity = 72/206 (34.95%), Postives = 105/206 (50.97%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. ExPASy Swiss-Prot
Match: Q55CU8 (Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum OX=44689 GN=pitC PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 6.5e-24 Identity = 78/257 (30.35%), Postives = 129/257 (50.19%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. ExPASy Swiss-Prot
Match: P53860 (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR16 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.5e-20 Identity = 70/221 (31.67%), Postives = 106/221 (47.96%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. ExPASy Swiss-Prot
Match: P53844 (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR17 PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 7.5e-20 Identity = 74/234 (31.62%), Postives = 108/234 (46.15%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. ExPASy Swiss-Prot
Match: Q0V9N0 (SEC14-like protein 5 OS=Xenopus tropicalis OX=8364 GN=sec14l1 PE=2 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 5.2e-13 Identity = 61/221 (27.60%), Postives = 98/221 (44.34%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. ExPASy TrEMBL
Match: A0A0A0KM57 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502640 PE=4 SV=1) HSP 1 Score: 617.1 bits (1590), Expect = 3.9e-173 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. ExPASy TrEMBL
Match: A0A1S4DU33 (CRAL-TRIO domain-containing protein C23B6.04c-like OS=Cucumis melo OX=3656 GN=LOC103485046 PE=4 SV=1) HSP 1 Score: 581.3 bits (1497), Expect = 2.4e-162 Identity = 277/297 (93.27%), Postives = 288/297 (96.97%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. ExPASy TrEMBL
Match: A0A5A7SYD5 (CRAL-TRIO domain-containing protein C23B6.04c-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002140 PE=4 SV=1) HSP 1 Score: 581.3 bits (1497), Expect = 2.4e-162 Identity = 277/297 (93.27%), Postives = 288/297 (96.97%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. ExPASy TrEMBL
Match: A0A6J1GFK6 (CRAL-TRIO domain-containing protein C23B6.04c-like OS=Cucurbita moschata OX=3662 GN=LOC111453505 PE=4 SV=1) HSP 1 Score: 534.3 bits (1375), Expect = 3.3e-148 Identity = 252/298 (84.56%), Postives = 278/298 (93.29%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. ExPASy TrEMBL
Match: A0A6J1ILC0 (phosphatidylinositol transfer protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478486 PE=4 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 9.7e-148 Identity = 251/298 (84.23%), Postives = 276/298 (92.62%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. TAIR 10
Match: AT1G75170.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 371.3 bits (952), Expect = 7.2e-103 Identity = 171/286 (59.79%), Postives = 224/286 (78.32%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. TAIR 10
Match: AT1G75170.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 371.3 bits (952), Expect = 7.2e-103 Identity = 171/286 (59.79%), Postives = 224/286 (78.32%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. TAIR 10
Match: AT4G36640.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 364.4 bits (934), Expect = 8.8e-101 Identity = 169/296 (57.09%), Postives = 227/296 (76.69%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. TAIR 10
Match: AT4G36640.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 299.7 bits (766), Expect = 2.7e-81 Identity = 136/234 (58.12%), Postives = 183/234 (78.21%), Query Frame = 0
BLAST of CsaV3_6G046220 vs. TAIR 10
Match: AT1G75170.3 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 272.3 bits (695), Expect = 4.6e-73 Identity = 126/206 (61.17%), Postives = 162/206 (78.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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