CsaV3_6G045920 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G045920
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr6: 27166851 .. 27168806 (-)
RNA-Seq ExpressionCsaV3_6G045920
SyntenyCsaV3_6G045920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTACGTTGACTCAACATCTCAACTGCTTTTCAAAGCTATCAACTCTCACTTGGTGGAACTCCAGCATACGAGGCGCTGTAAATCAAGGCAATGCGAGCAAAGCTCTCGCTCTTTTCCATCAATTGAAGTTAAATGGTCTACAACCAAACAATTTTACATTTCCCTTCTTATCAAAAGCTTGCGCCAAGCTCTCCCATCTTACTAACTCCCAAATCATCCATACCCATGTTGTCAAATCCCCATTTTACTCTGATATCTATGTCCAGACGGCCATGGTTGATATGTATGTCAAGTGTGGTAAAGTGGATGATGCATATAACTTGTTTGATAAAATGCCTGTTAGGAATATTGCATCATGGAACGCTATGATTATTGGTTTTTCTCAGATCGGCTCACTTGATAGAGTGTTCAATCTGTTTATGGGGATGAGATTAGTGGGAACTCGGCCAGATGCAGCTACTGTCATTGGATTGACTCGAGCAGTTATATCTGCCAAAAGTTTAAGGTTTTTAAAAGCTGTTCATGCTATTGGGATTGAAACAGGATTAGATGCTGACACCTCAGTTTCTAACACTTGGATTGCTGCCTATTCCAAATGCGGTGAACTGCAGCTTGCAAAGATGGTGTTCCATGGGATTCAAAAGACTGCAAGATCTTCTGTCTCGTGGAATTCACTGATTGCATGCTATGCTCACTTTGGGAAATATGTAGATGCTGTAAAATCTTACAAAGGATTGCTCTGTGATGGTTTTAAGCCTGATGCAAGTACGATTATTAGTTTGCTTTCTTCTTGCCAGCAACCTGAAGCACTAATTTATGGTTTCCTTATTCATGGCCATGGTTTCCAATTAGGATGCGATTCAGATATTTCTTTAATTAACACCCTTATATCAATGTATTCAAGGTGTGGAGATATTAGCTCTGCTACAATTTTGTTTGATGGTATGTCTATTAGAACTTGTGTTTCATGGACGGCCATGATTAGTGGGTATAGTGAGGTGGGGCGAGTTGATGATGCCTTGGTATTATTTAATGCTATGGAAGAAACTGGAGAAAAACCTGATATAGTTACTGTTCTTTCCCTGATATCAGGTTGCGGTAAAACAGGGGCACTTGGGCTTGGACATTGGATTGACAACTATGCATCTTTACATGAATTGAAAAAAGATGTGGTAGTTTGTAATGCATTGATAGACATGTATGCAAAATGTGGGAGTTTGAATGATGCTCGAGAGATATTCTACAGTTTGCCTAATAGAACTGTTGTCTCTTGGACAGCCATGATTGCAGCTTGTGCTCTGAATGGGGAATTTAGAGAAGCTTTAGATCTCTTCTCACTGTTGTCAGAGTCAGGAATAGAGCCAAATAATATCACGTTTCTAGCTGTTCTTCAAGCTTGCTGTCATGGAGGCTATCTCGAGAAAGGAAGGGAATGTTTTATGATGATGACTGAAAGATATGGTATAAATCCTGGTTTGGATCATTATTCTTGCATGATCGATCTTCTTGGACGGAAAGGGAAGCTAATTGAAGCATTGGAGGTTATTCAAGATATGCCTATGAAGCCTGACGAGGGCATATGGGGTGCATTGCTTGGTGCTTGTAAGATTCACAACAACATGGAAATCGGTGAGTATGTGTCTCGTTATCTCTTTGAATTACAGCCTCGGGTTGCAGTTTCGTTCGTCGAGATGGCAAATATATATGCATCAGTTGGAAGATGGGATGAAGTTGCAGCTATGAGAAAAACGATGAGATCAAACCAAATGAGGAAATCCCCTGGGAAAAGCGTTGTTCAAGTGAATGGAATGTCTCACGTGTTTTTTGTTGAGGACAGAAGCCATCACGACAGTTTGCTTATTTATGAAGCGTTGGGAAATTTAGCAATGCAGATGAAACAAAAAGAATTCTCGTCACATGCTCAGAGGTGGGTTGAGCTTGATACGATATGA

mRNA sequence

ATGTCTACGTTGACTCAACATCTCAACTGCTTTTCAAAGCTATCAACTCTCACTTGGTGGAACTCCAGCATACGAGGCGCTGTAAATCAAGGCAATGCGAGCAAAGCTCTCGCTCTTTTCCATCAATTGAAGTTAAATGGTCTACAACCAAACAATTTTACATTTCCCTTCTTATCAAAAGCTTGCGCCAAGCTCTCCCATCTTACTAACTCCCAAATCATCCATACCCATGTTGTCAAATCCCCATTTTACTCTGATATCTATGTCCAGACGGCCATGGTTGATATGTATGTCAAGTGTGGTAAAGTGGATGATGCATATAACTTGTTTGATAAAATGCCTGTTAGGAATATTGCATCATGGAACGCTATGATTATTGGTTTTTCTCAGATCGGCTCACTTGATAGAGTGTTCAATCTGTTTATGGGGATGAGATTAGTGGGAACTCGGCCAGATGCAGCTACTGTCATTGGATTGACTCGAGCAGTTATATCTGCCAAAAGTTTAAGGTTTTTAAAAGCTGTTCATGCTATTGGGATTGAAACAGGATTAGATGCTGACACCTCAGTTTCTAACACTTGGATTGCTGCCTATTCCAAATGCGGTGAACTGCAGCTTGCAAAGATGGTGTTCCATGGGATTCAAAAGACTGCAAGATCTTCTGTCTCGTGGAATTCACTGATTGCATGCTATGCTCACTTTGGGAAATATGTAGATGCTGTAAAATCTTACAAAGGATTGCTCTGTGATGGTTTTAAGCCTGATGCAAGTACGATTATTAGTTTGCTTTCTTCTTGCCAGCAACCTGAAGCACTAATTTATGGTTTCCTTATTCATGGCCATGGTTTCCAATTAGGATGCGATTCAGATATTTCTTTAATTAACACCCTTATATCAATGTATTCAAGGTGTGGAGATATTAGCTCTGCTACAATTTTGTTTGATGGTATGTCTATTAGAACTTGTGTTTCATGGACGGCCATGATTAGTGGGTATAGTGAGGTGGGGCGAGTTGATGATGCCTTGGTATTATTTAATGCTATGGAAGAAACTGGAGAAAAACCTGATATAGTTACTGTTCTTTCCCTGATATCAGTTTCGTTCGTCGAGATGGCAAATATATATGCATCAGTTGGAAGATGGGATGAAGTTGCAGCTATGAGAAAAACGATGAGATCAAACCAAATGAGGAAATCCCCTGGGAAAAGCGTTGTTCAAGTGAATGGAATGTCTCACGTGTTTTTTGTTGAGGACAGAAGCCATCACGACAGTTTGCTTATTTATGAAGCGTTGGGAAATTTAGCAATGCAGATGAAACAAAAAGAATTCTCGTCACATGCTCAGAGGTGGGTTGAGCTTGATACGATATGA

Coding sequence (CDS)

ATGTCTACGTTGACTCAACATCTCAACTGCTTTTCAAAGCTATCAACTCTCACTTGGTGGAACTCCAGCATACGAGGCGCTGTAAATCAAGGCAATGCGAGCAAAGCTCTCGCTCTTTTCCATCAATTGAAGTTAAATGGTCTACAACCAAACAATTTTACATTTCCCTTCTTATCAAAAGCTTGCGCCAAGCTCTCCCATCTTACTAACTCCCAAATCATCCATACCCATGTTGTCAAATCCCCATTTTACTCTGATATCTATGTCCAGACGGCCATGGTTGATATGTATGTCAAGTGTGGTAAAGTGGATGATGCATATAACTTGTTTGATAAAATGCCTGTTAGGAATATTGCATCATGGAACGCTATGATTATTGGTTTTTCTCAGATCGGCTCACTTGATAGAGTGTTCAATCTGTTTATGGGGATGAGATTAGTGGGAACTCGGCCAGATGCAGCTACTGTCATTGGATTGACTCGAGCAGTTATATCTGCCAAAAGTTTAAGGTTTTTAAAAGCTGTTCATGCTATTGGGATTGAAACAGGATTAGATGCTGACACCTCAGTTTCTAACACTTGGATTGCTGCCTATTCCAAATGCGGTGAACTGCAGCTTGCAAAGATGGTGTTCCATGGGATTCAAAAGACTGCAAGATCTTCTGTCTCGTGGAATTCACTGATTGCATGCTATGCTCACTTTGGGAAATATGTAGATGCTGTAAAATCTTACAAAGGATTGCTCTGTGATGGTTTTAAGCCTGATGCAAGTACGATTATTAGTTTGCTTTCTTCTTGCCAGCAACCTGAAGCACTAATTTATGGTTTCCTTATTCATGGCCATGGTTTCCAATTAGGATGCGATTCAGATATTTCTTTAATTAACACCCTTATATCAATGTATTCAAGGTGTGGAGATATTAGCTCTGCTACAATTTTGTTTGATGGTATGTCTATTAGAACTTGTGTTTCATGGACGGCCATGATTAGTGGGTATAGTGAGGTGGGGCGAGTTGATGATGCCTTGGTATTATTTAATGCTATGGAAGAAACTGGAGAAAAACCTGATATAGTTACTGTTCTTTCCCTGATATCAGTTTCGTTCGTCGAGATGGCAAATATATATGCATCAGTTGGAAGATGGGATGAAGTTGCAGCTATGAGAAAAACGATGAGATCAAACCAAATGAGGAAATCCCCTGGGAAAAGCGTTGTTCAAGTGAATGGAATGTCTCACGTGTTTTTTGTTGAGGACAGAAGCCATCACGACAGTTTGCTTATTTATGAAGCGTTGGGAAATTTAGCAATGCAGATGAAACAAAAAGAATTCTCGTCACATGCTCAGAGGTGGGTTGAGCTTGATACGATATGA

Protein sequence

MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRWVELDTI*
Homology
BLAST of CsaV3_6G045920 vs. NCBI nr
Match: KAE8647579.1 (hypothetical protein Csa_003473 [Cucumis sativus])

HSP 1 Score: 910.6 bits (2352), Expect = 5.4e-261
Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 0

Query: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
           MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK
Sbjct: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
           ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
           WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI
Sbjct: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
           ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA
Sbjct: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240

Query: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
           VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRS 420
           LSLISVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRS
Sbjct: 361 LSLISVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRS 420

Query: 421 HHDSLLIYEALGNLAMQMKQKEFSSHAQRWVELDTI 457
           HHDSLLIYEALGNLAMQMKQKEFSSHAQRWVELDTI
Sbjct: 421 HHDSLLIYEALGNLAMQMKQKEFSSHAQRWVELDTI 456

BLAST of CsaV3_6G045920 vs. NCBI nr
Match: XP_004143574.1 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Cucumis sativus] >XP_031743718.1 pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Cucumis sativus] >XP_031743719.1 pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Cucumis sativus])

HSP 1 Score: 831.2 bits (2146), Expect = 4.2e-237
Identity = 456/651 (70.05%), Postives = 456/651 (70.05%), Query Frame = 0

Query: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
           MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK
Sbjct: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
           ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
           WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI
Sbjct: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
           ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA
Sbjct: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240

Query: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
           VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLIS------------------------------------------------------- 420
           LSLIS                                                       
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPN 420

Query: 421 ------------------------------------------------------------ 457
                                                                       
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

BLAST of CsaV3_6G045920 vs. NCBI nr
Match: KAA0036256.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12650.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 785.0 bits (2026), Expect = 3.4e-223
Identity = 433/651 (66.51%), Postives = 441/651 (67.74%), Query Frame = 0

Query: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
           M +LT HLN FSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFL+K
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
           ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGK +DAYNLFDKMPVRNIAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
           WNAMI+GFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAV+SAKSLRFLKAVHAIGI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
           ETGLDAD SVSNTWI+AYSKCGELQLAKMVFHGIQK ARSSVSWNSLIACYAHFGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
           V SYKGLLCDGFKPDA TIISLL SCQQPEALIYG LIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLIS------------------------------------------------------- 420
           LSLIS                                                       
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 ------------------------------------------------------------ 457
                                                                       
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

BLAST of CsaV3_6G045920 vs. NCBI nr
Match: XP_008440673.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 784.3 bits (2024), Expect = 5.9e-223
Identity = 433/651 (66.51%), Postives = 441/651 (67.74%), Query Frame = 0

Query: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
           M +LT HLN FSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFL+K
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
           ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGK +DAYNLFDKMPVRNIAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
           WNAMI+GFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAV+SAKSLRFLKAVHAIGI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
           ETGLDAD SVSNTWI+AYSKCGELQLAKMVFHGIQK ARSSVSWNSLIACYAHFGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
           V SYKGLLCDGFKPDA TIISLL SCQQPEALIYG LIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLIS------------------------------------------------------- 420
           LSLIS                                                       
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 ------------------------------------------------------------ 457
                                                                       
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

BLAST of CsaV3_6G045920 vs. NCBI nr
Match: XP_008440672.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 783.9 bits (2023), Expect = 7.7e-223
Identity = 433/650 (66.62%), Postives = 440/650 (67.69%), Query Frame = 0

Query: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
           M +LT HLN FSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFL+K
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
           ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGK +DAYNLFDKMPVRNIAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
           WNAMI+GFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAV+SAKSLRFLKAVHAIGI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
           ETGLDAD SVSNTWI+AYSKCGELQLAKMVFHGIQK ARSSVSWNSLIACYAHFGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
           V SYKGLLCDGFKPDA TIISLL SCQQPEALIYG LIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLIS------------------------------------------------------- 420
           LSLIS                                                       
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 ------------------------------------------------------------ 456
                                                                       
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

BLAST of CsaV3_6G045920 vs. ExPASy Swiss-Prot
Match: P0C8Q2 (Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E1 PE=2 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.8e-103
Identity = 186/365 (50.96%), Postives = 253/365 (69.32%), Query Frame = 0

Query: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
           MS + + L   S LS++  WN  IR AVN+ +  ++L LF ++K  G +PNNFTFPF++K
Sbjct: 1   MSLIHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
           ACA+L+ +   +++H H++KSPF+SD++V TA VDM+VKC  VD A  +F++MP R+  +
Sbjct: 61  ACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATT 120

Query: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
           WNAM+ GF Q G  D+ F+LF  MRL    PD+ TV+ L ++    KSL+ L+A+HA+GI
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
             G+D   +V+NTWI+ Y KCG+L  AK+VF  I +  R+ VSWNS+   Y+ FG+  DA
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDA 240

Query: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
              Y  +L + FKPD ST I+L +SCQ PE L  G LIH H   LG D DI  INT ISM
Sbjct: 241 FGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
           YS+  D  SA +LFD M+ RTCVSWT MISGY+E G +D+AL LF+AM ++GEKPD+VT+
Sbjct: 301 YSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL 360

Query: 361 LSLIS 366
           LSLIS
Sbjct: 361 LSLIS 365


HSP 2 Score: 169.9 bits (429), Expect = 6.9e-41
Identity = 121/429 (28.21%), Postives = 197/429 (45.92%), Query Frame = 0

Query: 16  TLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIH 75
           T+  WNS  +     G A  A  L+  +     +P+  TF  L+ +C     LT  ++IH
Sbjct: 220 TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIH 279

Query: 76  THVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLD 135
           +H +      DI      + MY K      A  LFD M  R   SW  MI G+++ G +D
Sbjct: 280 SHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMD 339

Query: 136 RVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDAD-TSVSNTW 195
               LF  M   G +PD  T++ L        SL   K + A     G   D   + N  
Sbjct: 340 EALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNAL 399

Query: 196 IAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKP 255
           I  YSKCG +  A+ +F    +  ++ V+W ++IA YA  G +++A+K +  ++   +KP
Sbjct: 400 IDMYSKCGSIHEARDIFDNTPE--KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKP 459

Query: 256 DASTIISLLSSCQQPEALIYGF-LIHGHGFQLGCDSDISLINTLISMYSRCGDISSATIL 315
           +  T +++L +C    +L  G+   H           +   + ++ +  R G +  A  L
Sbjct: 460 NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALEL 519

Query: 316 FDGMSIRTCVS-WTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISVSFVEMA 375
              MS +     W A+++       V  A       E+  E   +  +   ++  +VEMA
Sbjct: 520 IRNMSAKPDAGIWGALLNACKIHRNVKIA-------EQAAE--SLFNLEPQMAAPYVEMA 579

Query: 376 NIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHHDSLLIYEALG 435
           NIYA+ G WD  A +R  M+   ++K PG+SV+QVNG +H F V +  H ++ +IY  L 
Sbjct: 580 NIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLN 637

Query: 436 NLAMQMKQK 442
            L++  K K
Sbjct: 640 GLSLFAKDK 637

BLAST of CsaV3_6G045920 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.6e-56
Identity = 149/551 (27.04%), Postives = 244/551 (44.28%), Query Frame = 0

Query: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
           WN+  RG     +   AL L+  +   GL PN++TFPF+ K+CAK       Q IH HV+
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 80  KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDK--------------------------- 139
           K     D+YV T+++ MYV+ G+++DA+ +FDK                           
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221

Query: 140 ----MPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKS 199
               +PV+++ SWNAMI G+++ G+      LF  M     RPD +T++ +  A   + S
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281

Query: 200 LRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLI 259
           +   + VH    + G  ++  + N  I  YSKCGEL+ A  +F  +    +  +SWN+LI
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL--PYKDVISWNTLI 341

Query: 260 ACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQ--LG 319
             Y H   Y +A+  ++ +L  G  P+  T++S+L +C    A+  G  IH +  +   G
Sbjct: 342 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 401

Query: 320 CDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFN 379
             +  SL  +LI MY++CGDI +A  +F+ +  ++  SW AMI G++  GR D +  LF+
Sbjct: 402 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS 461

Query: 380 AMEETGEKPDIVTVLSLISV---------------------------------------- 439
            M + G +PD +T + L+S                                         
Sbjct: 462 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHS 521

Query: 440 ------------------------------------------------------SFVEMA 444
                                                                 S+V ++
Sbjct: 522 GLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLS 581

BLAST of CsaV3_6G045920 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.3e-55
Identity = 148/553 (26.76%), Postives = 239/553 (43.22%), Query Frame = 0

Query: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
           WNS + G        +AL  F  +   G   N ++F  +  AC+ L+ +     +H+ + 
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179

Query: 80  KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
           KSPF SD+Y+ +A+VDMY KCG V+DA  +FD+M  RN+ SWN++I  F Q G      +
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239

Query: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETG-LDADTSVSNTWIAAY 199
           +F  M      PD  T+  +  A  S  +++  + VH   ++   L  D  +SN ++  Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299

Query: 200 SKCGELQLAKMVFHGI-----------------------------QKTARSSVSWNSLIA 259
           +KC  ++ A+ +F  +                             +   R+ VSWN+LIA
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359

Query: 260 CYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGF------LIHGHGF 319
            Y   G+  +A+  +  L  +   P   +  ++L +C     L  G       L HG  F
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419

Query: 320 QLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALV 379
           Q G + DI + N+LI MY +CG +    ++F  M  R CVSW AMI G+++ G  ++AL 
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479

Query: 380 LFNAMEETGEKPDIVTVLSLIS----VSFVE----------------------------- 439
           LF  M E+GEKPD +T++ ++S      FVE                             
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLL 539

Query: 440 ------------------------------------------------------------ 443
                                                                       
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYV 599

BLAST of CsaV3_6G045920 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 9.2e-54
Identity = 118/383 (30.81%), Postives = 209/383 (54.57%), Query Frame = 0

Query: 12  SKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNS 71
           SKL+ L  +++ ++G     +  KAL  F +++ + ++P  + F +L K C   + L   
Sbjct: 97  SKLNVL--YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVG 156

Query: 72  QIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQI 131
           + IH  +VKS F  D++  T + +MY KC +V++A  +FD+MP R++ SWN ++ G+SQ 
Sbjct: 157 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 216

Query: 132 GSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVS 191
           G       +   M     +P   T++ +  AV + + +   K +H   + +G D+  ++S
Sbjct: 217 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 276

Query: 192 NTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDG 251
              +  Y+KCG L+ A+ +F G+ +  R+ VSWNS+I  Y       +A+  ++ +L +G
Sbjct: 277 TALVDMYAKCGSLETARQLFDGMLE--RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 336

Query: 252 FKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSAT 311
            KP   +++  L +C     L  G  IH    +LG D ++S++N+LISMY +C ++ +A 
Sbjct: 337 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 396

Query: 312 ILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISVSFVEM 371
            +F  +  RT VSW AMI G+++ GR  DAL  F+ M     KPD  T +S+I+ +  E+
Sbjct: 397 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT-AIAEL 456

Query: 372 ANIYASVGRWDEVAAMRKTMRSN 395
           +  + +  +W     MR  +  N
Sbjct: 457 SITHHA--KWIHGVVMRSCLDKN 472

BLAST of CsaV3_6G045920 vs. ExPASy Swiss-Prot
Match: O04659 (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E14 PE=2 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-53
Identity = 123/346 (35.55%), Postives = 189/346 (54.62%), Query Frame = 0

Query: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
           WN+ I      G A KAL LF +++ +G +PN+ +      AC++L  L   + IH   V
Sbjct: 176 WNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCV 235

Query: 80  KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
           K  F  D YV +A+VDMY KC  ++ A  +F KMP +++ +WN+MI G+   G       
Sbjct: 236 KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVE 295

Query: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYS 199
           +   M + GTRP   T+  +  A   +++L   K +H   I + ++AD  V+ + I  Y 
Sbjct: 296 ILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYF 355

Query: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259
           KCGE  LA+ VF   QK    + SWN +I+ Y   G +  AV+ Y  ++  G KPD  T 
Sbjct: 356 KCGEANLAETVFSKTQKDV--AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 415

Query: 260 ISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSI 319
            S+L +C Q  AL  G  IH    +   ++D  L++ L+ MYS+CG+   A  +F+ +  
Sbjct: 416 TSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK 475

Query: 320 RTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLIS 366
           +  VSWT MIS Y   G+  +AL  F+ M++ G KPD VT+L+++S
Sbjct: 476 KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519

BLAST of CsaV3_6G045920 vs. ExPASy TrEMBL
Match: A0A0A0KK94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501860 PE=4 SV=1)

HSP 1 Score: 831.2 bits (2146), Expect = 2.0e-237
Identity = 456/651 (70.05%), Postives = 456/651 (70.05%), Query Frame = 0

Query: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
           MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK
Sbjct: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
           ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
           WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI
Sbjct: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
           ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA
Sbjct: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240

Query: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
           VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLIS------------------------------------------------------- 420
           LSLIS                                                       
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPN 420

Query: 421 ------------------------------------------------------------ 457
                                                                       
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

BLAST of CsaV3_6G045920 vs. ExPASy TrEMBL
Match: A0A5D3CMI9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002380 PE=4 SV=1)

HSP 1 Score: 785.0 bits (2026), Expect = 1.7e-223
Identity = 433/651 (66.51%), Postives = 441/651 (67.74%), Query Frame = 0

Query: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
           M +LT HLN FSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFL+K
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
           ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGK +DAYNLFDKMPVRNIAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
           WNAMI+GFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAV+SAKSLRFLKAVHAIGI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
           ETGLDAD SVSNTWI+AYSKCGELQLAKMVFHGIQK ARSSVSWNSLIACYAHFGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
           V SYKGLLCDGFKPDA TIISLL SCQQPEALIYG LIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLIS------------------------------------------------------- 420
           LSLIS                                                       
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 ------------------------------------------------------------ 457
                                                                       
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

BLAST of CsaV3_6G045920 vs. ExPASy TrEMBL
Match: A0A1S3B2E4 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485014 PE=4 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 2.8e-223
Identity = 433/651 (66.51%), Postives = 441/651 (67.74%), Query Frame = 0

Query: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
           M +LT HLN FSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFL+K
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
           ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGK +DAYNLFDKMPVRNIAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
           WNAMI+GFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAV+SAKSLRFLKAVHAIGI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
           ETGLDAD SVSNTWI+AYSKCGELQLAKMVFHGIQK ARSSVSWNSLIACYAHFGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
           V SYKGLLCDGFKPDA TIISLL SCQQPEALIYG LIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLIS------------------------------------------------------- 420
           LSLIS                                                       
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 ------------------------------------------------------------ 457
                                                                       
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

BLAST of CsaV3_6G045920 vs. ExPASy TrEMBL
Match: A0A1S3B296 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485014 PE=4 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 3.7e-223
Identity = 433/650 (66.62%), Postives = 440/650 (67.69%), Query Frame = 0

Query: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
           M +LT HLN FSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFL+K
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
           ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGK +DAYNLFDKMPVRNIAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
           WNAMI+GFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAV+SAKSLRFLKAVHAIGI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
           ETGLDAD SVSNTWI+AYSKCGELQLAKMVFHGIQK ARSSVSWNSLIACYAHFGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
           V SYKGLLCDGFKPDA TIISLL SCQQPEALIYG LIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLIS------------------------------------------------------- 420
           LSLIS                                                       
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 ------------------------------------------------------------ 456
                                                                       
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

BLAST of CsaV3_6G045920 vs. ExPASy TrEMBL
Match: A0A6J1BUQ5 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005926 PE=4 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 1.5e-187
Identity = 370/649 (57.01%), Postives = 407/649 (62.71%), Query Frame = 0

Query: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
           MS+L  H N FSK ST+TWWNS+IR AVN G+  KAL LF Q+KLNGLQPNNFTFPF++K
Sbjct: 1   MSSLPPHFNRFSKFSTVTWWNSNIRDAVNHGHPFKALVLFRQMKLNGLQPNNFTFPFIAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
           ACAKLS+L N+QIIHTHVVKSPF+SDI+VQTAMVDMYVKC KV+DAYNLF+KMPVR+IAS
Sbjct: 61  ACAKLSNLCNTQIIHTHVVKSPFHSDIFVQTAMVDMYVKCCKVEDAYNLFEKMPVRDIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
           WNAMIIGF+Q GS DRVF+LF+GM LVG RPD ATVIGLTRAV+SAKSLRFLKAVHAIGI
Sbjct: 121 WNAMIIGFAQFGSPDRVFHLFVGMGLVGIRPDPATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
           ETGLDAD SV+NTWIAAYSKCGELQ+A+MVF GIQK ARSSVSWNSLI+CYA F +Y+DA
Sbjct: 181 ETGLDADVSVANTWIAAYSKCGELQVAEMVFKGIQKHARSSVSWNSLISCYAKFERYLDA 240

Query: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
           V +YKGL+CDGFKPDASTIISLLSSC QPEAL+YG LIHGHG QLGCDSDISL NTLISM
Sbjct: 241 VNTYKGLICDGFKPDASTIISLLSSCMQPEALVYGSLIHGHGVQLGCDSDISLTNTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDI SA  LFDGMSIRTCVSWTAMISGYSEVGR+D+ALVLFNAMEE GEKPD+VTV
Sbjct: 301 YSRCGDIFSARTLFDGMSIRTCVSWTAMISGYSEVGRIDEALVLFNAMEEAGEKPDLVTV 360

Query: 361 LSLIS------------------------------------------------------- 420
           LSLIS                                                       
Sbjct: 361 LSLISGCGKAGALELGHWIERYSYLHGLKQDVVVSNALIDMYGKCGSMSDARDVFYGLPN 420

Query: 421 ------------------------------------------------------------ 455
                                                                       
Sbjct: 421 RTIVSWTAMIAACALNGEFREALDIFHLMSESGIMPNHVTFVAVLQACSHEGYLEKGREC 480

BLAST of CsaV3_6G045920 vs. TAIR 10
Match: AT4G19191.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 377.1 bits (967), Expect = 2.0e-104
Identity = 186/365 (50.96%), Postives = 253/365 (69.32%), Query Frame = 0

Query: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
           MS + + L   S LS++  WN  IR AVN+ +  ++L LF ++K  G +PNNFTFPF++K
Sbjct: 1   MSLIHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
           ACA+L+ +   +++H H++KSPF+SD++V TA VDM+VKC  VD A  +F++MP R+  +
Sbjct: 61  ACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATT 120

Query: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
           WNAM+ GF Q G  D+ F+LF  MRL    PD+ TV+ L ++    KSL+ L+A+HA+GI
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
             G+D   +V+NTWI+ Y KCG+L  AK+VF  I +  R+ VSWNS+   Y+ FG+  DA
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDA 240

Query: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
              Y  +L + FKPD ST I+L +SCQ PE L  G LIH H   LG D DI  INT ISM
Sbjct: 241 FGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
           YS+  D  SA +LFD M+ RTCVSWT MISGY+E G +D+AL LF+AM ++GEKPD+VT+
Sbjct: 301 YSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL 360

Query: 361 LSLIS 366
           LSLIS
Sbjct: 361 LSLIS 365


HSP 2 Score: 169.9 bits (429), Expect = 4.9e-42
Identity = 121/429 (28.21%), Postives = 197/429 (45.92%), Query Frame = 0

Query: 16  TLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIH 75
           T+  WNS  +     G A  A  L+  +     +P+  TF  L+ +C     LT  ++IH
Sbjct: 220 TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIH 279

Query: 76  THVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLD 135
           +H +      DI      + MY K      A  LFD M  R   SW  MI G+++ G +D
Sbjct: 280 SHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMD 339

Query: 136 RVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDAD-TSVSNTW 195
               LF  M   G +PD  T++ L        SL   K + A     G   D   + N  
Sbjct: 340 EALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNAL 399

Query: 196 IAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKP 255
           I  YSKCG +  A+ +F    +  ++ V+W ++IA YA  G +++A+K +  ++   +KP
Sbjct: 400 IDMYSKCGSIHEARDIFDNTPE--KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKP 459

Query: 256 DASTIISLLSSCQQPEALIYGF-LIHGHGFQLGCDSDISLINTLISMYSRCGDISSATIL 315
           +  T +++L +C    +L  G+   H           +   + ++ +  R G +  A  L
Sbjct: 460 NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALEL 519

Query: 316 FDGMSIRTCVS-WTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISVSFVEMA 375
              MS +     W A+++       V  A       E+  E   +  +   ++  +VEMA
Sbjct: 520 IRNMSAKPDAGIWGALLNACKIHRNVKIA-------EQAAE--SLFNLEPQMAAPYVEMA 579

Query: 376 NIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHHDSLLIYEALG 435
           NIYA+ G WD  A +R  M+   ++K PG+SV+QVNG +H F V +  H ++ +IY  L 
Sbjct: 580 NIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLN 637

Query: 436 NLAMQMKQK 442
            L++  K K
Sbjct: 640 GLSLFAKDK 637

BLAST of CsaV3_6G045920 vs. TAIR 10
Match: AT3G61170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 225.3 bits (573), Expect = 9.8e-59
Identity = 136/481 (28.27%), Postives = 231/481 (48.02%), Query Frame = 0

Query: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
           W S + G    G A KA+  F  L+  G Q N +TFP +  ACA +S       +H  +V
Sbjct: 195 WTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIV 254

Query: 80  KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
           KS F ++IYVQ+A++DMY KC +++ A  L + M V ++ SWN+MI+G  + G +    +
Sbjct: 255 KSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALS 314

Query: 140 LFMGMRLVGTRPDAATVIGLTRA-VISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAY 199
           +F  M     + D  T+  +     +S   ++   + H + ++TG      V+N  +  Y
Sbjct: 315 MFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMY 374

Query: 200 SKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDAST 259
           +K G +  A  VF G+    +  +SW +L+    H G Y +A+K +  +   G  PD   
Sbjct: 375 AKRGIMDSALKVFEGM--IEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIV 434

Query: 260 IISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMS 319
             S+LS+  +   L +G  +HG+  + G  S +S+ N+L++MY++CG +  A ++F+ M 
Sbjct: 435 TASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME 494

Query: 320 IRTCVSWTAMISGYSEVGRVDDALVLFNAMEET-----------------GEKPDIVTVL 379
           IR  ++WT +I GY++ G ++DA   F++M                    G   D V V 
Sbjct: 495 IRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVE 554

Query: 380 SLI------------------------------------------SVSFVEMANIYASVG 439
            L+                                          +V +V+++N+Y++ G
Sbjct: 555 QLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAG 614

Query: 440 RWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMK 441
           R DE A +R+ M+S  + K PG S V+  G  H F  EDR H   + IY  +  + + +K
Sbjct: 615 RQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIK 673

BLAST of CsaV3_6G045920 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 219.5 bits (558), Expect = 5.4e-57
Identity = 149/551 (27.04%), Postives = 244/551 (44.28%), Query Frame = 0

Query: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
           WN+  RG     +   AL L+  +   GL PN++TFPF+ K+CAK       Q IH HV+
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 80  KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDK--------------------------- 139
           K     D+YV T+++ MYV+ G+++DA+ +FDK                           
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221

Query: 140 ----MPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKS 199
               +PV+++ SWNAMI G+++ G+      LF  M     RPD +T++ +  A   + S
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281

Query: 200 LRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLI 259
           +   + VH    + G  ++  + N  I  YSKCGEL+ A  +F  +    +  +SWN+LI
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL--PYKDVISWNTLI 341

Query: 260 ACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQ--LG 319
             Y H   Y +A+  ++ +L  G  P+  T++S+L +C    A+  G  IH +  +   G
Sbjct: 342 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 401

Query: 320 CDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFN 379
             +  SL  +LI MY++CGDI +A  +F+ +  ++  SW AMI G++  GR D +  LF+
Sbjct: 402 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS 461

Query: 380 AMEETGEKPDIVTVLSLISV---------------------------------------- 439
            M + G +PD +T + L+S                                         
Sbjct: 462 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHS 521

Query: 440 ------------------------------------------------------SFVEMA 444
                                                                 S+V ++
Sbjct: 522 GLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLS 581

BLAST of CsaV3_6G045920 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 218.8 bits (556), Expect = 9.2e-57
Identity = 148/553 (26.76%), Postives = 239/553 (43.22%), Query Frame = 0

Query: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
           WNS + G        +AL  F  +   G   N ++F  +  AC+ L+ +     +H+ + 
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179

Query: 80  KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
           KSPF SD+Y+ +A+VDMY KCG V+DA  +FD+M  RN+ SWN++I  F Q G      +
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239

Query: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETG-LDADTSVSNTWIAAY 199
           +F  M      PD  T+  +  A  S  +++  + VH   ++   L  D  +SN ++  Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299

Query: 200 SKCGELQLAKMVFHGI-----------------------------QKTARSSVSWNSLIA 259
           +KC  ++ A+ +F  +                             +   R+ VSWN+LIA
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359

Query: 260 CYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGF------LIHGHGF 319
            Y   G+  +A+  +  L  +   P   +  ++L +C     L  G       L HG  F
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419

Query: 320 QLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALV 379
           Q G + DI + N+LI MY +CG +    ++F  M  R CVSW AMI G+++ G  ++AL 
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479

Query: 380 LFNAMEETGEKPDIVTVLSLIS----VSFVE----------------------------- 439
           LF  M E+GEKPD +T++ ++S      FVE                             
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLL 539

Query: 440 ------------------------------------------------------------ 443
                                                                       
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYV 599

BLAST of CsaV3_6G045920 vs. TAIR 10
Match: AT5G27110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 214.5 bits (545), Expect = 1.7e-55
Identity = 148/515 (28.74%), Postives = 230/515 (44.66%), Query Frame = 0

Query: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
           WN+ I      G A KAL LF +++ +G +PN+ +      AC++L  L   + IH   V
Sbjct: 176 WNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCV 235

Query: 80  KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
           K  F  D YV +A+VDMY KC  ++ A  +F KMP +++ +WN+MI G+   G       
Sbjct: 236 KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVE 295

Query: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYS 199
           +   M + GTRP   T+  +  A   +++L   K +H   I + ++AD  V+ + I  Y 
Sbjct: 296 ILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYF 355

Query: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259
           KCGE  LA+ VF   QK    + SWN +I+ Y   G +  AV+ Y  ++  G KPD  T 
Sbjct: 356 KCGEANLAETVFSKTQKDV--AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 415

Query: 260 ISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSI 319
            S+L +C Q  AL  G  IH    +   ++D  L++ L+ MYS+CG+   A  +F+ +  
Sbjct: 416 TSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK 475

Query: 320 RTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISV------------- 379
           +  VSWT MIS Y   G+  +AL  F+ M++ G KPD VT+L+++S              
Sbjct: 476 KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKF 535

Query: 380 ------------------------------------------------------------ 439
                                                                       
Sbjct: 536 FSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLH 595

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8647579.15.4e-261100.00hypothetical protein Csa_003473 [Cucumis sativus][more]
XP_004143574.14.2e-23770.05pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Cucumis sa... [more]
KAA0036256.13.4e-22366.51pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12650... [more]
XP_008440673.15.9e-22366.51PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial ... [more]
XP_008440672.17.7e-22366.62PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial ... [more]
Match NameE-valueIdentityDescription
P0C8Q22.8e-10350.96Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidop... [more]
Q9LN017.6e-5627.04Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q9SIT71.3e-5526.76Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
Q3E6Q19.2e-5430.81Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
O046591.2e-5335.55Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0KK942.0e-23770.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501860 PE=4 SV=1[more]
A0A5D3CMI91.7e-22366.51Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B2E42.8e-22366.51pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X2 ... [more]
A0A1S3B2963.7e-22366.62pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 ... [more]
A0A6J1BUQ51.5e-18757.01pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 ... [more]
Match NameE-valueIdentityDescription
AT4G19191.12.0e-10450.96Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G61170.19.8e-5928.27Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.15.4e-5727.04Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G13600.19.2e-5726.76Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G27110.11.7e-5528.74Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 271..453
e-value: 6.7E-23
score: 83.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 169..270
e-value: 8.5E-16
score: 59.8
coord: 78..168
e-value: 1.9E-18
score: 68.4
coord: 7..77
e-value: 1.3E-6
score: 29.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 20..64
e-value: 1.8E-7
score: 31.2
coord: 323..365
e-value: 1.1E-9
score: 38.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 222..256
e-value: 2.0E-4
score: 19.3
coord: 323..357
e-value: 9.1E-9
score: 33.0
coord: 20..51
e-value: 0.0025
score: 15.9
coord: 120..153
e-value: 0.0023
score: 16.0
coord: 89..118
e-value: 1.5E-4
score: 19.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 192..213
e-value: 0.15
score: 12.4
coord: 222..251
e-value: 0.0015
score: 18.6
coord: 295..317
e-value: 0.024
score: 14.9
coord: 120..145
e-value: 0.0032
score: 17.6
coord: 91..118
e-value: 5.9E-5
score: 23.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 86..120
score: 10.029647
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 16..50
score: 8.747175
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 10.007725
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 321..355
score: 11.838262
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 366..453
coord: 10..365
NoneNo IPR availablePANTHERPTHR24015:SF1993REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 366..453
coord: 10..365

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G045920.1CsaV3_6G045920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding