CsaV3_6G045740 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATAAGGTACAGAAAATGGGGGTTATGGTTATCTGACCCCTACGCTAGGGGCCAACGAAACACCAAGGCCACCAAACACGTTTTCCACTATAAATACAACAAGGGTTTAAGCCATTCAATACCCACCGATTGAACAAATTAAAAGCCCACTGAAACATTTGTAGAAATTTCTTCATTTCATTTCCTTTTCTTCTGTATAAACCATGTCCTCCATGGGAGCTAGCTGCGCTAGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTGCAGAGGATGGAGCAGGAGAGATCTGGCAGGAGAGAAGATTCCGTCAAACCTCCAAAAACTTCCCATCACGCCGCCGGCGGAATTGCCGGAAAATCCAGTAAAAAAGTCCATCCGGGTACCCTATTTGGGCTTCAGGCCACCTCTAATTCCTGAAAACAGGCCTCCTCTGGCTTTTACTTTCTCAATAGAAATTTCATGCCAGAGTCGAAGCTTTTAGTGCTTTTTTTCTTTTCTTTTCTTTTTCTACGTCTTGTGTAAATTTTTGAACTTCCTTCGGTGATGTGATCTGGCTAGAAATCAAACTAAGGAAGGTACAAATTATGGGTTATATCTTCTTCTTTCTCTCTTCGTCTCCATTTTTGGTGTGAATTTTGGAGCGTTGTTGAAATATAGTTCTAGTTCATTAAAACACGTTAACAAGTCAAAAAATGATTCTGATACTTCTGAACATGGGAGAACTGGTTAATTAATTCGTAGTAATTATGCATTCAATTGTAGAATTTGTCCCTATATCTTGAAAACAAAGTTGTAATTTTTTAGTACAACCATGGTGTAATGAGATCCAACATTCTAATCCTATTCTAAATTGTAAAACTGGTCACTTTAACTTAAGAAAACTATAATTTAGTCTCAATAACAAGGATTATTTGTGATAGCTTCATTCAATTATAAGGATTTCTCTTAGACTTTCTGCACTTAAAAGAGACTAAATCTAAACTTATGAAACAATAGAAACTAAATTAATTTCCCTTCAATTATAGTGATAAATTTCGTCTTTTTATCTTCAATTCACGTTTAGGGAAGACTTTAGACAATATCGACAATATCTTTTTTTTTTTCTCGAAATAAGGAGACAGCATCTTCTTGTTGGTACCAGTGTTTAGATAGAAATAAGAGGGTTTAGAATTAAATACTATCTATCTATATCTATATAGGTCAATTTATGGGGGGAATAGCATTGTCATTTCCTAAAGTCTTGAAAAAAATGGAGATTAAATATGGATTTGTTCGATGTAATTTTCGATGTAATTGTTTGTCGGGGAAACTTTGTATTTGAAGTATTGTTTTGAAGAGGTAGGCCATTATTTGTTGTGGTCAATAATGATATATTACTCAATTATTGACTAATAAACTACTAAATTTAGTTTGTCAGTTTAGATGTATGCTGTCCCAAAATGTAATAACCTAATCAATATTTTTTTGAGAACCAACAAACAATATGGAAAATAG ATGTCCTCCATGGGAGCTAGCTGCGCTAGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTGCAGAGGATGGAGCAGGAGAGATCTGGCAGGAGAGAAGATTCCGTCAAACCTCCAAAAACTTCCCATCACGCCGCCGGCGGAATTGCCGGAAAATCCAGTAAAAAAGTCCATCCGGGTACCCTATTTGGGCTTCAGGCCACCTCTAATTCCTGA ATGTCCTCCATGGGAGCTAGCTGCGCTAGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTGCAGAGGATGGAGCAGGAGAGATCTGGCAGGAGAGAAGATTCCGTCAAACCTCCAAAAACTTCCCATCACGCCGCCGGCGGAATTGCCGGAAAATCCAGTAAAAAAGTCCATCCGGGTACCCTATTTGGGCTTCAGGCCACCTCTAATTCCTGA MSSMGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTSHHAAGGIAGKSSKKVHPGTLFGLQATSNS* Homology
BLAST of CsaV3_6G045740 vs. NCBI nr
Match: KGN48780.1 (hypothetical protein Csa_002943 [Cucumis sativus]) HSP 1 Score: 139.0 bits (349), Expect = 1.6e-29 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of CsaV3_6G045740 vs. NCBI nr
Match: KAA0036273.1 (hypothetical protein E6C27_scaffold18G00720 [Cucumis melo var. makuwa] >TYK12667.1 hypothetical protein E5676_scaffold255G002550 [Cucumis melo var. makuwa]) HSP 1 Score: 123.2 bits (308), Expect = 9.0e-25 Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CsaV3_6G045740 vs. NCBI nr
Match: KAG6604014.1 (hypothetical protein SDJN03_04623, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19 Identity = 54/73 (73.97%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of CsaV3_6G045740 vs. NCBI nr
Match: KAG6594855.1 (hypothetical protein SDJN03_11408, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 94.0 bits (232), Expect = 5.8e-16 Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of CsaV3_6G045740 vs. NCBI nr
Match: KAF4351893.1 (hypothetical protein F8388_020454 [Cannabis sativa]) HSP 1 Score: 54.3 bits (129), Expect = 5.1e-04 Identity = 33/64 (51.56%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of CsaV3_6G045740 vs. ExPASy TrEMBL
Match: A0A0A0KGB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500720 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 7.7e-30 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of CsaV3_6G045740 vs. ExPASy TrEMBL
Match: A0A5A7T065 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002550 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.3e-25 Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CsaV3_6G045740 vs. ExPASy TrEMBL
Match: A0A2N9EUS9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.0e-05 Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of CsaV3_6G045740 vs. ExPASy TrEMBL
Match: A0A7J6E0F2 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_020454 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.5e-04 Identity = 33/64 (51.56%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of CsaV3_6G045740 vs. ExPASy TrEMBL
Match: A0A7J6I0D6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_023334 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.5e-04 Identity = 33/64 (51.56%), Postives = 39/64 (60.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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