CsaV3_6G045730 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTATAAATGAGAGAAGAGATTGAGCATATATATATGTATAAATTTAAAACCAAAATCCCAATTTTTTTTTAAAATCACCCAAGAAATACAATAACCGTAAATGAAGGAGGGAAAAAAGGGAAAGCGTCCATGTGGGGTTGCCAAGTGGCACCACAAAGACCGGCCATGTGGAAGTCTTCAGGGCCTAGGTGCAGACGAGTGAGCAATTGCTCTTATTGATGTACTTGGAGCTACCCAACACTTCAATCTCCGATTTATCAATCGGTTTAATTTGGAGGAGGGCGGGGTTCGTTCACTTTTCAAGAAGATAAAAAGGATATGGAATTTGCCGGAAAAGAAGTAGTTGTCATCTCCGGCTGTTCCGACGGAGGCATAGGCCACTCTCTCGCCCGAGCCTTCGCCGACCAGGGCTGTTTGGTAGTCGCAACCAGCAGGTCCCGCTCCTCAATGGCGGACCTGGAGCACGATCCCAGATTTTTCTTACAAGAACTCGATGTCCTGTCCGACCAAAGCGTCGAGCGATTAACGTCTCTTGTCATCGAAAAATTCGGTCGAATCGATATTTTGGTGAACAACGCTGGCGTTCAATGTATTGGACCTATTGCCGAGGTTCAACTTTCCGCTATGCAGAACGCCTTCAATACCAATGTTTTCGGTGAGCTTCGGTCTCTAACAAATTATCCATCAGCGAAATTAATTGTATTTCAATATTCAGATTCGCCATTTCATTTTTCTTCCTTCAGAATTGAATGATATCGAATCTAGGGATTAGAAACTGTGAATTGACTGAGCCGCTTATTTAGATTTCGAATTGATTTGAGTTTGATATTGTTTTGTGATTAACATTTGATCCAGTGGTCGGTTAGAAATAAACGCTGAAGACTTTATCATCCTATCTTCTGCTCTACTGTGTTCGTCAGCTTCTGCTACTGTATATAATTGTATTCCTGGCAAACACGGGTGGATTTAGCATAGGTACAGGAGCTCGAGTCCCATCAACTTAAGATCTTTATATTACAATATATATATATAGAAAACTGAAATAGTACCAATTTAAGAAGTTAGTGAACAATGAAATTATTTAGTCCCTCTATACTCAAGTTCAAGTCCTATTAGTTATATTTTCTTCCATCAACTTAAGATCTTTATATTACAATATATATATATAGAAAACTGAAATAGTACCAATTTAAGAAGTTGGTGAACAATGAAATTATTTAGTCCCTCTATACTCAGGTTCAAGTCCTATTAGTTATATTTTCTTCCAAATTATTTTTAATAGTCTATAAAGCCTTAGTCAATAAAATTTCTGATTCGCCACTGGTTAGAAACAAAGCTGTTTGTTTGGTATGTGAAATGTAGAAAGCAGAGTTAGAGGTGGGGAAAATTTGAACATGAACACTCCAATATGGAAAGGAGTGGATTATTGTATTATGTTAAATTAGTATTTATGAATTGGAGAATTGCATTTGCAGGGACTATGAGATTGATTCAAACCGTGGTTCCTCACATGGCATCACGAAGAAAGGGGAAGATTGTGAATTTGGGAAGTGTCACCGTATTGGCGCCTCTTCCATGGGCTGGTGCTTATACTGCATCCAAAGCTGCTATTCATTCCATTTCTGACTGTCTGAGGTTCGTATATACCTCTCTGATTCTCATCTAATGGTATAATTAACAATTGTTTTGTGTTCCTGATCATGCACGAAATGTTTTGCCTTGCCTTAGTTAATTATCTCGATCTTCCAGACCCTCGCTAGTGATAGTTTATTAAGTTAATTTGAACCTCACTAGTCTTTTTCTGGGATGAAAGTTGACTACTAAAGCTATTTGATAGCAATTTGCTTTTTAAAAATTAAGTTTACAAACTCTCTACTTTTCATCTATTGGTTTTTTTATTTAGTTATCCACCTTTTATCATTAATTCTAAAATCCAATACTAAGTTTTGAAAGGTAGAGAAAGTTTTTGCAATTTGCAATTCTAAAAACCAAGACTAAATTTTGAAAAGTAAAGAAAGATAGTTTTTGCAATTTGAAAATTTACTAAGAAAATTTGGTCTTTCTTGATAAATAGTATGACAGGGAAGTTGTTAAAAGAACAAATCCATTGTTCGAGGACCAAAAACAAAAGAACTAAAAAGTTTTCAGACATACTTTAAAACTATTTTTTTGGTTTTTGAGTGGTTTAGATTTTTTAGAAACGAGTTAGGAAGAAAATTAGAGGTGAAAATAGGGTTTATAAATATTAATTTTTAAAAATAAAGAACCAAAATTCAAATAAAGCTCGTTGGTGGAGTTTAACTTTCAACCGCAATTCTTACCTTAAATCAAGGGATTAAATTAATATTTCTATGGATTTGAGTTCCGATTCTTGTAGCCATTCTTGTGAGTGGATGAGCATCATTCCACTTTGTTTATCTATCTTTGAATAATTTTTAGTTGGATTTGAAATTTTGATGTTTTTGCTTGTTTGATTATGTAGTGGGTTCGAGACCTTTATGCTTAAAGTTTAAATTGAGTATTCATATGAGAAAAATAAGTGCCGGGGTCCTATTGAATTTCTAGTGTATCTTTTTAGCAGCTCAAAGATCTCAAAGATATGTATAGAATATATTAAGTTACAATGCACTGAAGTAGAACTGTAGAAACAGAAACAACCCACAAAAGTCTGATGGGTAAGCAAATATTTCTTTTTCTGCTGGGTTTATTTTTATGGGTTACTTATTGTTGATTCAAGACAACTTATTTCTTCATGAAAGTCGGTTTGAAATGACTTTATAGAACATTGTTTTATAAGACGATCTTTGAGGCAAAGAGTGAAGTTGTGAGTTATGAAAACTAGAAACTTGTAAACTGATGGGAGTAAAATGTACGGGTTATTGATGTTTTTTAGTTGTGAAAGCCTACAAATTTTTTAGTTTAAATAAAGAGGGGAAGTTTACCATTCCACACTTCTACTTCTGTTTCTATGTTGTTACTCTCAACTCTTGTGCAAAAAAATACCCCTCCAAAAAAACTTTCTTTTTTTCAATGCTTAGAAAAGTTATTCCAAGACATTAAAGTTCAAAATCTAAAACTTTCTTTTTTCTTTTTGCTTTTTAGGGGGCCACGGCCCATGATAGAAACTTGAATAAACGCAATGAATATCCAATTCAATTTGCTGACATATTTCATTTGATTTTCGCATTTATTTCACACTGTGATGTTGGTTGACTTGATCGATATTTTCATCATTGAAGGATGGAGCTGAAGCCCTTTGGAATCGACGTTATCAACGTTGTCCCTGGAGCCATTAAATCAAACATTGGAAACTCTGCCATTGCCAACTTTAATCAGATGCCTGAGTTGAAGCTATTCAAGCCCTTTGAAGCTGCAATGTTAGCCAGGGCCAATGCCTCGCAGGGCTCTAACGCCACCCCTACTGCCGAGTTTGCCGAGAAGACAGTCGCCGCTGTTCTTAAAACGAAGCCATCGCCTTGGTTCTCATATGGAAGCTATTCCACCCTCATGGCTGTTATGTACCATTTGCCGATTTTCCTCAAGGACTTAATTGTGCAATTTCTCTCTAAACGATTTTTGAATAGCAAAAAATAGTTGGGTTATAGATTCTATATTTGGTGAAAAATATGGTAATTTGTAATAAAGAATTAGAAAAATGTCAAGATTAGTCTTTGATTGATGCATCTCTAGCTCTGAGAAAGTGTTTAGATTTCTAAATTGAAGGATTGCTGAAAGAATGAAATAAGTATGTCAAAGAAATTCACCCATTAGAGACAGACAACCTCAGTAATGTTCAAAAGAAATTTTAGTATAAAAACGTGAGTAGATTTTTTCTATATGTTTAGAAACATTTTGATA ATGGAATTTGCCGGAAAAGAAGTAGTTGTCATCTCCGGCTGTTCCGACGGAGGCATAGGCCACTCTCTCGCCCGAGCCTTCGCCGACCAGGGCTGTTTGGTAGTCGCAACCAGCAGGTCCCGCTCCTCAATGGCGGACCTGGAGCACGATCCCAGATTTTTCTTACAAGAACTCGATGTCCTGTCCGACCAAAGCGTCGAGCGATTAACGTCTCTTGTCATCGAAAAATTCGGTCGAATCGATATTTTGGTGAACAACGCTGGCGTTCAATGTATTGGACCTATTGCCGAGGTTCAACTTTCCGCTATGCAGAACGCCTTCAATACCAATGTTTTCGGGACTATGAGATTGATTCAAACCGTGGTTCCTCACATGGCATCACGAAGAAAGGGGAAGATTGTGAATTTGGGAAGTGTCACCGTATTGGCGCCTCTTCCATGGGCTGGTGCTTATACTGCATCCAAAGCTGCTATTCATTCCATTTCTGACTGTCTGAGGATGGAGCTGAAGCCCTTTGGAATCGACGTTATCAACGTTGTCCCTGGAGCCATTAAATCAAACATTGGAAACTCTGCCATTGCCAACTTTAATCAGATGCCTGAGTTGAAGCTATTCAAGCCCTTTGAAGCTGCAATGTTAGCCAGGGCCAATGCCTCGCAGGGCTCTAACGCCACCCCTACTGCCGAGTTTGCCGAGAAGACAGTCGCCGCTGTTCTTAAAACGAAGCCATCGCCTTGGTTCTCATATGGAAGCTATTCCACCCTCATGGCTGTTATGTACCATTTGCCGATTTTCCTCAAGGACTTAATTGTGCAATTTCTCTCTAAACGATTTTTGAATAGCAAAAAATAG ATGGAATTTGCCGGAAAAGAAGTAGTTGTCATCTCCGGCTGTTCCGACGGAGGCATAGGCCACTCTCTCGCCCGAGCCTTCGCCGACCAGGGCTGTTTGGTAGTCGCAACCAGCAGGTCCCGCTCCTCAATGGCGGACCTGGAGCACGATCCCAGATTTTTCTTACAAGAACTCGATGTCCTGTCCGACCAAAGCGTCGAGCGATTAACGTCTCTTGTCATCGAAAAATTCGGTCGAATCGATATTTTGGTGAACAACGCTGGCGTTCAATGTATTGGACCTATTGCCGAGGTTCAACTTTCCGCTATGCAGAACGCCTTCAATACCAATGTTTTCGGGACTATGAGATTGATTCAAACCGTGGTTCCTCACATGGCATCACGAAGAAAGGGGAAGATTGTGAATTTGGGAAGTGTCACCGTATTGGCGCCTCTTCCATGGGCTGGTGCTTATACTGCATCCAAAGCTGCTATTCATTCCATTTCTGACTGTCTGAGGATGGAGCTGAAGCCCTTTGGAATCGACGTTATCAACGTTGTCCCTGGAGCCATTAAATCAAACATTGGAAACTCTGCCATTGCCAACTTTAATCAGATGCCTGAGTTGAAGCTATTCAAGCCCTTTGAAGCTGCAATGTTAGCCAGGGCCAATGCCTCGCAGGGCTCTAACGCCACCCCTACTGCCGAGTTTGCCGAGAAGACAGTCGCCGCTGTTCTTAAAACGAAGCCATCGCCTTGGTTCTCATATGGAAGCTATTCCACCCTCATGGCTGTTATGTACCATTTGCCGATTTTCCTCAAGGACTTAATTGTGCAATTTCTCTCTAAACGATTTTTGAATAGCAAAAAATAG MEFAGKEVVVISGCSDGGIGHSLARAFADQGCLVVATSRSRSSMADLEHDPRFFLQELDVLSDQSVERLTSLVIEKFGRIDILVNNAGVQCIGPIAEVQLSAMQNAFNTNVFGTMRLIQTVVPHMASRRKGKIVNLGSVTVLAPLPWAGAYTASKAAIHSISDCLRMELKPFGIDVINVVPGAIKSNIGNSAIANFNQMPELKLFKPFEAAMLARANASQGSNATPTAEFAEKTVAAVLKTKPSPWFSYGSYSTLMAVMYHLPIFLKDLIVQFLSKRFLNSKK* Homology
BLAST of CsaV3_6G045730 vs. NCBI nr
Match: XP_004143486.1 (short-chain dehydrogenase RED1 [Cucumis sativus] >KGN48779.1 hypothetical protein Csa_004229 [Cucumis sativus]) HSP 1 Score: 550.8 bits (1418), Expect = 6.8e-153 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. NCBI nr
Match: XP_008440647.1 (PREDICTED: uncharacterized oxidoreductase SSP0419 [Cucumis melo] >KAA0036274.1 putative oxidoreductase [Cucumis melo var. makuwa] >TYK12668.1 putative oxidoreductase [Cucumis melo var. makuwa]) HSP 1 Score: 533.5 bits (1373), Expect = 1.1e-147 Identity = 273/283 (96.47%), Postives = 277/283 (97.88%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. NCBI nr
Match: XP_038881070.1 (short-chain dehydrogenase RED1-like [Benincasa hispida]) HSP 1 Score: 505.4 bits (1300), Expect = 3.3e-139 Identity = 257/283 (90.81%), Postives = 269/283 (95.05%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. NCBI nr
Match: XP_023517767.1 (uncharacterized protein LOC111781425 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 503.4 bits (1295), Expect = 1.2e-138 Identity = 253/283 (89.40%), Postives = 268/283 (94.70%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. NCBI nr
Match: XP_022963395.1 (uncharacterized protein LOC111463610 [Cucurbita moschata]) HSP 1 Score: 502.3 bits (1292), Expect = 2.8e-138 Identity = 253/283 (89.40%), Postives = 267/283 (94.35%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. ExPASy Swiss-Prot
Match: G4N286 (Short-chain dehydrogenase RED1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=RED1 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.1e-33 Identity = 85/249 (34.14%), Postives = 139/249 (55.82%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. ExPASy Swiss-Prot
Match: A0A140JWS5 (Short-chain dehydrogenase ptmH OS=Penicillium simplicissimum OX=69488 GN=ptmH PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 6.4e-29 Identity = 87/266 (32.71%), Postives = 141/266 (53.01%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. ExPASy Swiss-Prot
Match: A0A0E3D8L9 (Short-chain dehydrogenase PC-15 OS=Penicillium crustosum OX=36656 GN=PC-15 PE=3 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 9.2e-28 Identity = 85/263 (32.32%), Postives = 138/263 (52.47%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. ExPASy Swiss-Prot
Match: Q09851 (NADPH-dependent 1-acyldihydroxyacetone phosphate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ayr1 PE=3 SV=2) HSP 1 Score: 119.0 bits (297), Expect = 8.6e-26 Identity = 71/216 (32.87%), Postives = 117/216 (54.17%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. ExPASy Swiss-Prot
Match: A0A0U1LQE2 (Short-chain dehydrogenase cctT OS=Talaromyces islandicus OX=28573 GN=cctT PE=3 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.1e-24 Identity = 68/209 (32.54%), Postives = 121/209 (57.89%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. ExPASy TrEMBL
Match: A0A0A0KIY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500710 PE=3 SV=1) HSP 1 Score: 550.8 bits (1418), Expect = 3.3e-153 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. ExPASy TrEMBL
Match: A0A5A7SYA8 (Putative oxidoreductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002560 PE=3 SV=1) HSP 1 Score: 533.5 bits (1373), Expect = 5.4e-148 Identity = 273/283 (96.47%), Postives = 277/283 (97.88%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. ExPASy TrEMBL
Match: A0A1S3B2C4 (uncharacterized oxidoreductase SSP0419 OS=Cucumis melo OX=3656 GN=LOC103485000 PE=3 SV=1) HSP 1 Score: 533.5 bits (1373), Expect = 5.4e-148 Identity = 273/283 (96.47%), Postives = 277/283 (97.88%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. ExPASy TrEMBL
Match: A0A6J1HHW0 (uncharacterized protein LOC111463610 OS=Cucurbita moschata OX=3662 GN=LOC111463610 PE=3 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138 Identity = 253/283 (89.40%), Postives = 267/283 (94.35%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. ExPASy TrEMBL
Match: A0A6J1KSI9 (uncharacterized protein LOC111496864 OS=Cucurbita maxima OX=3661 GN=LOC111496864 PE=3 SV=1) HSP 1 Score: 500.7 bits (1288), Expect = 3.9e-138 Identity = 250/283 (88.34%), Postives = 268/283 (94.70%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. TAIR 10
Match: AT5G10050.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 369.4 bits (947), Expect = 2.6e-102 Identity = 181/275 (65.82%), Postives = 223/275 (81.09%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. TAIR 10
Match: AT5G65205.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 350.5 bits (898), Expect = 1.3e-96 Identity = 169/272 (62.13%), Postives = 220/272 (80.88%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. TAIR 10
Match: AT1G67730.1 (beta-ketoacyl reductase 1 ) HSP 1 Score: 77.0 bits (188), Expect = 2.7e-14 Identity = 57/202 (28.22%), Postives = 98/202 (48.51%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. TAIR 10
Match: AT3G47350.1 (hydroxysteroid dehydrogenase 2 ) HSP 1 Score: 76.6 bits (187), Expect = 3.5e-14 Identity = 55/189 (29.10%), Postives = 96/189 (50.79%), Query Frame = 0
BLAST of CsaV3_6G045730 vs. TAIR 10
Match: AT3G47350.2 (hydroxysteroid dehydrogenase 2 ) HSP 1 Score: 76.6 bits (187), Expect = 3.5e-14 Identity = 55/189 (29.10%), Postives = 96/189 (50.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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