CsaV3_6G045540 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G045540
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	PLAT domain-containing protein
Location	chr6: 26978652 .. 26980702 (-)
RNA-Seq Expression	CsaV3_6G045540
Synteny	CsaV3_6G045540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATTTAGGTCTTCGTGGTGTGAGATGAAATAAAAAGTAATTGAAACATTTAAAAAATGCTCACAAGCATTATATTTTGAGGATTAATTATGTTGGATTCATAATATACTGAGTCAGTAGTTATTGTCATTTATTTAGAAAAGAAGAGGGAGAAATCGGAAGAATCGAGACGATGCCATTTATTTGTGAGTACGTGGAGACAGATGATTGGATGAATCATTTGAAAGATTATCAAATTGTTGACATTCACCATTAATAGTGGGCCATCAAATGATTGCAGCCGTCCGATGAATCTCAATTGAGTTGGCATGGTTTTAGCAATTAGATTTTCTATATATAATAATATCTACAAGAACAAAACATACTCATCATTCCACAACACAACCATGGCCACCAAATCTGCCCTCTTCTTCTCCATTCTCCTTTCCTTCTCTGCCATAGCTTTCTCCGATGTATTTCCACTTACTCTCCTCCGTTTTTTTTTTTTTTTTTTTTTGCCCTTTGAAAGAAATAAAAATAACTGATGTACATTTTGGATTTGTTTGATGCAGAATCCAGATTGCGTGTACACGGTGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGACTCGGTGATTACCGCCACGCTCTACACGGCTGCCGGGGATGGAATCAGGATTATGGATCTGGAGAAATGGGGCGGGTTGATGGGACCCGGCTACAACTACTTCGAGAGAGGTAATCTCGATATTTTCAGTGGAAGAGGTCCATGCCTGAGCGGACCCGTGTGTTCATTGAACCTGACCTCTGATGGATCGGGTCCGCACCATGGTTGGTACTGCAACTATCTGGAGGTGACCACAACAGGGGTTCATAGCCCGTGCGATCAACAACTGTTCACGGTGGAGCAGTGGTTGGCTCTGGATAGGTCGCCGTATAATCTGACCAACATCCAAAATAATTGTCCCAGTGGGAGTGGGAGTGAGAGTGGCCGGGATTTGATCCGATCAGGTGACCCCAATTTGAAGTTGAAGCAGGTGGTTTGAATATGATGTACGCAATAAAACTGTTGTAAGAGAAGGAAAGTGGAAGAGGTTATAATCGATGATTGAGCAGGATTTTGGGAATTAAATCAAAGGGGTGTTGTGTAATTGGTATGTTGGGTGAGAAGCAATAGTTAAATGGAGAGCAGCAGCAGTGTTTTGTTGTTGGTTTACTTTACTTTTTGATCGGATCTTGTTTGTTTGTCAGGAATGATGAACAAATGGGTGAGTAAGAAAAGGAGCAACAAAGAAAAAACAGCATTTAATCCTAATAATAATGAAAGTTAATGTGGGCAAGTGGGCCGTGGAGGGGATTTTGTCCGGAAGCCATTTGTCTTCGCATTGACCGATCATCTTTTTATTTTATTAAAGTTAAAAACTTAGTATCATATGTGTCGGCAAAGCTCTTTTTTTTTTTTTTCCCTTCTTTCCAACAAACTTTACCATCGATAGTTATAAAAATTGCGCCTAATTAGACTCTCAAAACAAATAAAGTATACGTTTTTGAGTTCATAATGAAAAGTATGCTTTAAATATGTTTTGAAGGTGTGGTTAGTAAATGGACCGTCACATTCAATAAATATAAACAGCAATACGATTAAAAGGGTGTGGAGTATCTTCCTTGGAACCGCTCTTTGTAAGGTTGTGTGTGGGGCTTTATTCCCCTTTAGGTTTAGGTTTTCTTTTTGTTGTATTGTTGTATTGGTTTTGTGTTTATTTATTGCCTTCAAATCCCCCTTTTGTTTTAACAATTCATTATCTATGGGGAAAAAAATCCTTAAAACAAACCAAATGTGAATTCCACAAATGTGAAATTTGGATTTTTCCTTGGAAGAGAGAAAATGTGACCTATCAAAAACAGACTTCAGATTTCAGAAAATATGATGAGAATTTCAAGGAAACGGTTCTCATTTTTTTTGTTTTCAAAATTTAATAAAGCTTCTAAAAATTGAACAAAAATAGAAAAACTACTATCCATAGTCTCTATTTTCTAGTTGGCCGAGGAGATAGGTCTACATTCA

mRNA sequence

ATGGTTTTAGCAATTAGATTTTCTATATATAATAATATCTACAAGAACAAAACATACTCATCATTCCACAACACAACCATGGCCACCAAATCTGCCCTCTTCTTCTCCATTCTCCTTTCCTTCTCTGCCATAGCTTTCTCCGATAATCCAGATTGCGTGTACACGGTGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGACTCGGTGATTACCGCCACGCTCTACACGGCTGCCGGGGATGGAATCAGGATTATGGATCTGGAGAAATGGGGCGGGTTGATGGGACCCGGCTACAACTACTTCGAGAGAGGTAATCTCGATATTTTCAGTGGAAGAGGTCCATGCCTGAGCGGACCCGTGTGTTCATTGAACCTGACCTCTGATGGATCGGGTCCGCACCATGGTTGGTACTGCAACTATCTGGAGGTGACCACAACAGGGGTTCATAGCCCGTGCGATCAACAACTGTTCACGGTGGAGCAGTGGTTGGCTCTGGATAGGTCGCCGTATAATCTGACCAACATCCAAAATAATTGTCCCAGTGGGAGTGGGAGTGAGAGTGGCCGGGATTTGATCCGATCAGGTGACCCCAATTTGAAGTTGAAGCAGGTGGTTTGA

Coding sequence (CDS)

ATGGTTTTAGCAATTAGATTTTCTATATATAATAATATCTACAAGAACAAAACATACTCATCATTCCACAACACAACCATGGCCACCAAATCTGCCCTCTTCTTCTCCATTCTCCTTTCCTTCTCTGCCATAGCTTTCTCCGATAATCCAGATTGCGTGTACACGGTGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGACTCGGTGATTACCGCCACGCTCTACACGGCTGCCGGGGATGGAATCAGGATTATGGATCTGGAGAAATGGGGCGGGTTGATGGGACCCGGCTACAACTACTTCGAGAGAGGTAATCTCGATATTTTCAGTGGAAGAGGTCCATGCCTGAGCGGACCCGTGTGTTCATTGAACCTGACCTCTGATGGATCGGGTCCGCACCATGGTTGGTACTGCAACTATCTGGAGGTGACCACAACAGGGGTTCATAGCCCGTGCGATCAACAACTGTTCACGGTGGAGCAGTGGTTGGCTCTGGATAGGTCGCCGTATAATCTGACCAACATCCAAAATAATTGTCCCAGTGGGAGTGGGAGTGAGAGTGGCCGGGATTTGATCCGATCAGGTGACCCCAATTTGAAGTTGAAGCAGGTGGTTTGA

Protein sequence

MVLAIRFSIYNNIYKNKTYSSFHNTTMATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLKQVV*

Homology

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BLAST of CsaV3_6G045540 vs. NCBI nr
Match: XP_004143473.2 (PLAT domain-containing protein 1 [Cucumis sativus] >KGN48760.1 hypothetical protein Csa_003522 [Cucumis sativus])

HSP 1 Score: 429.5 bits (1103), Expect = 1.7e-116
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MVLAIRFSIYNNIYKNKTYSSFHNTTMATKSALFFSILLSFSAIAFSDNPDCVYTVYIRT 60
           MVLAIRFSIYNNIYKNKTYSSFHNTTMATKSALFFSILLSFSAIAFSDNPDCVYTVYIRT
Sbjct: 1   MVLAIRFSIYNNIYKNKTYSSFHNTTMATKSALFFSILLSFSAIAFSDNPDCVYTVYIRT 60

Query: 61  GSILKAGTDSVITATLYTAAGDGIRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSG 120
           GSILKAGTDSVITATLYTAAGDGIRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSG
Sbjct: 61  GSILKAGTDSVITATLYTAAGDGIRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSG 120

Query: 121 PVCSLNLTSDGSGPHHGWYCNYLEVTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNN 180
           PVCSLNLTSDGSGPHHGWYCNYLEVTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNN
Sbjct: 121 PVCSLNLTSDGSGPHHGWYCNYLEVTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNN 180

Query: 181 CPSGSGSESGRDLIRSGDPNLKLKQVV 208
           CPSGSGSESGRDLIRSGDPNLKLKQVV
Sbjct: 181 CPSGSGSESGRDLIRSGDPNLKLKQVV 207

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BLAST of CsaV3_6G045540 vs. NCBI nr
Match: XP_008440608.1 (PREDICTED: lipoxygenase homology domain-containing protein 1 [Cucumis melo] >KAA0036292.1 lipoxygenase-like proteiny domain-containing protein 1 [Cucumis melo var. makuwa] >TYK12686.1 lipoxygenase-like proteiny domain-containing protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 336.3 bits (861), Expect = 1.9e-88
Identity = 162/181 (89.50%), Postives = 169/181 (93.37%), Query Frame = 0


Query: 27  MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 86
           MATKS LFF+ LLSFSAIAFSD+PDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI
Sbjct: 1   MATKSTLFFAFLLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 60

Query: 87  MDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVT 146
           +DLEKWGG+MGP YNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNY+EVT
Sbjct: 61  IDLEKWGGMMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 147 TTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLKQV 206
           TTGVH  CDQQLFTVEQWLALD  PY+LT IQNNCP  SGSES RDLIRSG PNL+LKQV
Sbjct: 121 TTGVHRSCDQQLFTVEQWLALDAPPYSLTAIQNNCP--SGSESRRDLIRSGGPNLELKQV 179

Query: 207 V 208
           V
Sbjct: 181 V 179

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BLAST of CsaV3_6G045540 vs. NCBI nr
Match: XP_038883182.1 (PLAT domain-containing protein 3 [Benincasa hispida])

HSP 1 Score: 295.8 bits (756), Expect = 2.9e-76
Identity = 142/178 (79.78%), Postives = 154/178 (86.52%), Query Frame = 0


Query: 27  MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 86
           M +KSALF SILLSFSA AFSD+P CVYTVYIRTGS LKAGTDSVI+ATLY+  GD + I
Sbjct: 1   MPSKSALFLSILLSFSATAFSDDPGCVYTVYIRTGSTLKAGTDSVISATLYSGQGDLVLI 60

Query: 87  MDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVT 146
            DLEKWGGLMGP YNYFERGNLD+FSGRGPCL+GPVC LNLTSDGSGPHHGWYCNY+EVT
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDVFSGRGPCLTGPVCGLNLTSDGSGPHHGWYCNYVEVT 120

Query: 147 TTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLK 205
           TTGVH PC+Q  FTVEQWLALD SPY LT I++NC  GSGS   RDLIRSG P+LKLK
Sbjct: 121 TTGVHRPCEQVQFTVEQWLALDASPYELTAIRDNCLHGSGSR--RDLIRSGGPSLKLK 176

[Close]

BLAST of CsaV3_6G045540 vs. NCBI nr
Match: XP_008440610.1 (PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 288.9 bits (738), Expect = 3.5e-74
Identity = 140/167 (83.83%), Postives = 147/167 (88.02%), Query Frame = 0


Query: 27  MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 86
           MA KS LF SILLSFSAIAFSD+ DCVYTVYIRTGS LKAGTDS I ATLY+A GD +RI
Sbjct: 1   MAYKSPLFLSILLSFSAIAFSDDADCVYTVYIRTGSTLKAGTDSAIAATLYSADGDEVRI 60

Query: 87  MDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVT 146
            DLEKWGGLMGP YNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNY+EVT
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 147 TTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDL 194
           TTGVH PC+Q LFTVEQWLALD SPY LT I+NNC SGSG +  RDL
Sbjct: 121 TTGVHRPCEQALFTVEQWLALDVSPYELTAIRNNCLSGSGIQ--RDL 165

[Close]

BLAST of CsaV3_6G045540 vs. NCBI nr
Match: XP_023002987.1 (PLAT domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 287.7 bits (735), Expect = 7.8e-74
Identity = 144/183 (78.69%), Postives = 153/183 (83.61%), Query Frame = 0


Query: 27  MATKSALF--FSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGI 86
           MA+KS LF   S+LLS S +A SD+PDCVYTVY+RTGSILKAGTDSVI+ATLYTA GDGI
Sbjct: 1   MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60

Query: 87  RIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLE 146
            I DLEKWGGLMGP YNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 61  LIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120

Query: 147 VTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLK 206
           VTTTGVH PCDQ  FTVEQWLALD SPY LT I+NNCP  S   S RD  RSG   L+LK
Sbjct: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKES-IGSRRDPTRSGP--LRLK 180

Query: 207 QVV 208
           QV+
Sbjct: 181 QVI 180

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BLAST of CsaV3_6G045540 vs. ExPASy Swiss-Prot
Match: O65660 (PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.0e-56
Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 27  MATKSAL--FFSILLSFSAIAFS-DNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDG 86
           MA +  L  F  +L + SA+AF+ D+PDCVYT Y+RTGSI KAGTDS+I+A +Y   GD 
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 87  IRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYL 146
           I I +L+ W GLMGP YNYFERGNLDIFSGR PCL  P+C+LNLTSDGSG HHGWY NY+
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYV 120

Query: 147 EVTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCP 183
           E+TT GVH+ C  Q F +EQWLA D SPY LT ++NNCP
Sbjct: 121 EITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNCP 159

[Close]

BLAST of CsaV3_6G045540 vs. ExPASy Swiss-Prot
Match: Q9SIE7 (PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.5e-56
Identity = 105/169 (62.13%), Postives = 124/169 (73.37%), Query Frame = 0


Query: 27  MATKSALFFSILL---SFSAIAFSDN-PDCVYTVYIRTGSILKAGTDSVITATLYTAAGD 86
           M  +  LF S+LL   + SA+A +D+  DCVYT ++RTGS  KAGTDS+I+A +Y   GD
Sbjct: 2   MPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGD 61

Query: 87  GIRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNY 146
            I I +LE WGGLMGPGYNY+ERGNLDIFSG+ PCL  PVCSLNLTSDGSG HHGWY NY
Sbjct: 62  YIGIRNLEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNY 121

Query: 147 LEVTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGR 192
           +EVTT GVH+ C  Q F VEQWLA D SPY L+ ++NNCP       GR
Sbjct: 122 VEVTTAGVHAKCSYQSFDVEQWLASDTSPYELSAVRNNCPVSLRESVGR 170

[Close]

BLAST of CsaV3_6G045540 vs. ExPASy Swiss-Prot
Match: Q2V2V3 (PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-33
Identity = 66/100 (66.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 76  LYTAAGDGIRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPH 135
           LY + G    I DL  WGGLMGP ++YFERGNLDIFSG G CLSGPVC++NLTSDGSG H
Sbjct: 5   LYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDGSGDH 64

Query: 136 HGWYCNYLEVT-TTGVHSPCDQQLFTVEQWLALDRSPYNL 175
           HGWYCNY+EVT +      C Q+ F VEQWLA D SPY L
Sbjct: 65  HGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

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BLAST of CsaV3_6G045540 vs. ExPASy Swiss-Prot
Match: Q8IVV2 (Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOXHD1 PE=2 SV=4)

HSP 1 Score: 45.8 bits (107), Expect = 6.8e-04
Identity = 38/125 (30.40%), Postives = 56/125 (44.80%), Query Frame = 0


Query: 53   VYTVYIRTGSILKAGTDSVITATLYTAAGDGIRIMDLEKWGGLMGPGYNYFERGNLDIFS 112
            +Y+V I TG+I  AGTD+ +  T+Y   GD       E++ G      N FERG  D F 
Sbjct: 1255 LYSVQIFTGNIPGAGTDAKVYITIYGDLGD-----TGERYLGKSENRTNKFERGTADTFI 1314

Query: 113  GRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVTTTGVHSPCDQQLFTVEQWLALDRSPY 172
                 L G +  + L  D S     WY   +E+      +  D+ LF   +WL+L +   
Sbjct: 1315 IEAADL-GVIYKIKLRHDNSKWCADWYVEKVEIWN---DTNEDEFLFLCGRWLSLKKEDG 1370

Query: 173  NLTNI 178
             L  +
Sbjct: 1375 RLERL 1370

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BLAST of CsaV3_6G045540 vs. ExPASy TrEMBL
Match: A0A0A0KGA0 (PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500520 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 8.1e-117
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MVLAIRFSIYNNIYKNKTYSSFHNTTMATKSALFFSILLSFSAIAFSDNPDCVYTVYIRT 60
           MVLAIRFSIYNNIYKNKTYSSFHNTTMATKSALFFSILLSFSAIAFSDNPDCVYTVYIRT
Sbjct: 1   MVLAIRFSIYNNIYKNKTYSSFHNTTMATKSALFFSILLSFSAIAFSDNPDCVYTVYIRT 60

Query: 61  GSILKAGTDSVITATLYTAAGDGIRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSG 120
           GSILKAGTDSVITATLYTAAGDGIRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSG
Sbjct: 61  GSILKAGTDSVITATLYTAAGDGIRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSG 120

Query: 121 PVCSLNLTSDGSGPHHGWYCNYLEVTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNN 180
           PVCSLNLTSDGSGPHHGWYCNYLEVTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNN
Sbjct: 121 PVCSLNLTSDGSGPHHGWYCNYLEVTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNN 180

Query: 181 CPSGSGSESGRDLIRSGDPNLKLKQVV 208
           CPSGSGSESGRDLIRSGDPNLKLKQVV
Sbjct: 181 CPSGSGSESGRDLIRSGDPNLKLKQVV 207

[Close]

BLAST of CsaV3_6G045540 vs. ExPASy TrEMBL
Match: A0A5A7SYJ2 (Lipoxygenase-like proteiny domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002740 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 9.3e-89
Identity = 162/181 (89.50%), Postives = 169/181 (93.37%), Query Frame = 0


Query: 27  MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 86
           MATKS LFF+ LLSFSAIAFSD+PDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI
Sbjct: 1   MATKSTLFFAFLLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 60

Query: 87  MDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVT 146
           +DLEKWGG+MGP YNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNY+EVT
Sbjct: 61  IDLEKWGGMMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 147 TTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLKQV 206
           TTGVH  CDQQLFTVEQWLALD  PY+LT IQNNCP  SGSES RDLIRSG PNL+LKQV
Sbjct: 121 TTGVHRSCDQQLFTVEQWLALDAPPYSLTAIQNNCP--SGSESRRDLIRSGGPNLELKQV 179

Query: 207 V 208
           V
Sbjct: 181 V 179

[Close]

BLAST of CsaV3_6G045540 vs. ExPASy TrEMBL
Match: A0A1S3B1J7 (lipoxygenase homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103484981 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 9.3e-89
Identity = 162/181 (89.50%), Postives = 169/181 (93.37%), Query Frame = 0


Query: 27  MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 86
           MATKS LFF+ LLSFSAIAFSD+PDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI
Sbjct: 1   MATKSTLFFAFLLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 60

Query: 87  MDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVT 146
           +DLEKWGG+MGP YNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNY+EVT
Sbjct: 61  IDLEKWGGMMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 147 TTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLKQV 206
           TTGVH  CDQQLFTVEQWLALD  PY+LT IQNNCP  SGSES RDLIRSG PNL+LKQV
Sbjct: 121 TTGVHRSCDQQLFTVEQWLALDAPPYSLTAIQNNCP--SGSESRRDLIRSGGPNLELKQV 179

Query: 207 V 208
           V
Sbjct: 181 V 179

[Close]

BLAST of CsaV3_6G045540 vs. ExPASy TrEMBL
Match: A0A1S3B1I1 (lipoxygenase homology domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC107990289 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.7e-74
Identity = 140/167 (83.83%), Postives = 147/167 (88.02%), Query Frame = 0


Query: 27  MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 86
           MA KS LF SILLSFSAIAFSD+ DCVYTVYIRTGS LKAGTDS I ATLY+A GD +RI
Sbjct: 1   MAYKSPLFLSILLSFSAIAFSDDADCVYTVYIRTGSTLKAGTDSAIAATLYSADGDEVRI 60

Query: 87  MDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVT 146
            DLEKWGGLMGP YNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNY+EVT
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 147 TTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDL 194
           TTGVH PC+Q LFTVEQWLALD SPY LT I+NNC SGSG +  RDL
Sbjct: 121 TTGVHRPCEQALFTVEQWLALDVSPYELTAIRNNCLSGSGIQ--RDL 165

[Close]

BLAST of CsaV3_6G045540 vs. ExPASy TrEMBL
Match: A0A6J1KL50 (PLAT domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496734 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.8e-74
Identity = 144/183 (78.69%), Postives = 153/183 (83.61%), Query Frame = 0


Query: 27  MATKSALF--FSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGI 86
           MA+KS LF   S+LLS S +A SD+PDCVYTVY+RTGSILKAGTDSVI+ATLYTA GDGI
Sbjct: 1   MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60

Query: 87  RIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLE 146
            I DLEKWGGLMGP YNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 61  LIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120

Query: 147 VTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLK 206
           VTTTGVH PCDQ  FTVEQWLALD SPY LT I+NNCP  S   S RD  RSG   L+LK
Sbjct: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKES-IGSRRDPTRSGP--LRLK 180

Query: 207 QVV 208
           QV+
Sbjct: 181 QVI 180

[Close]

BLAST of CsaV3_6G045540 vs. TAIR 10
Match: AT4G39730.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-57
Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 27  MATKSAL--FFSILLSFSAIAFS-DNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDG 86
           MA +  L  F  +L + SA+AF+ D+PDCVYT Y+RTGSI KAGTDS+I+A +Y   GD 
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 87  IRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYL 146
           I I +L+ W GLMGP YNYFERGNLDIFSGR PCL  P+C+LNLTSDGSG HHGWY NY+
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYV 120

Query: 147 EVTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCP 183
           E+TT GVH+ C  Q F +EQWLA D SPY LT ++NNCP
Sbjct: 121 EITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNCP 159

[Close]

BLAST of CsaV3_6G045540 vs. TAIR 10
Match: AT2G22170.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 219.2 bits (557), Expect = 3.2e-57
Identity = 105/169 (62.13%), Postives = 124/169 (73.37%), Query Frame = 0


Query: 27  MATKSALFFSILL---SFSAIAFSDN-PDCVYTVYIRTGSILKAGTDSVITATLYTAAGD 86
           M  +  LF S+LL   + SA+A +D+  DCVYT ++RTGS  KAGTDS+I+A +Y   GD
Sbjct: 2   MPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGD 61

Query: 87  GIRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNY 146
            I I +LE WGGLMGPGYNY+ERGNLDIFSG+ PCL  PVCSLNLTSDGSG HHGWY NY
Sbjct: 62  YIGIRNLEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNY 121

Query: 147 LEVTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGR 192
           +EVTT GVH+ C  Q F VEQWLA D SPY L+ ++NNCP       GR
Sbjct: 122 VEVTTAGVHAKCSYQSFDVEQWLASDTSPYELSAVRNNCPVSLRESVGR 170

[Close]

BLAST of CsaV3_6G045540 vs. TAIR 10
Match: AT5G65158.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 144.4 bits (363), Expect = 1.0e-34
Identity = 66/100 (66.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 76  LYTAAGDGIRIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPH 135
           LY + G    I DL  WGGLMGP ++YFERGNLDIFSG G CLSGPVC++NLTSDGSG H
Sbjct: 5   LYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDGSGDH 64

Query: 136 HGWYCNYLEVT-TTGVHSPCDQQLFTVEQWLALDRSPYNL 175
           HGWYCNY+EVT +      C Q+ F VEQWLA D SPY L
Sbjct: 65  HGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

The following BLAST results are available for this feature:

BLAST of CsaV3_6G045540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143473.2	1.7e-116	100.00	PLAT domain-containing protein 1 [Cucumis sativus] >KGN48760.1 hypothetical prot...	[more]
XP_008440608.1	1.9e-88	89.50	PREDICTED: lipoxygenase homology domain-containing protein 1 [Cucumis melo] >KAA...	[more]
XP_038883182.1	2.9e-76	79.78	PLAT domain-containing protein 3 [Benincasa hispida]	[more]
XP_008440610.1	3.5e-74	83.83	PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis melo]	[more]
XP_023002987.1	7.8e-74	78.69	PLAT domain-containing protein 1-like [Cucurbita maxima]	[more]

BLAST of CsaV3_6G045540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65660	2.0e-56	64.15	PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 S...	[more]
Q9SIE7	4.5e-56	62.13	PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 S...	[more]
Q2V2V3	1.4e-33	66.00	PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 S...	[more]
Q8IVV2	6.8e-04	30.40	Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOX...	[more]

BLAST of CsaV3_6G045540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGA0	8.1e-117	100.00	PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500520 PE=4 S...	[more]
A0A5A7SYJ2	9.3e-89	89.50	Lipoxygenase-like proteiny domain-containing protein 1 OS=Cucumis melo var. maku...	[more]
A0A1S3B1J7	9.3e-89	89.50	lipoxygenase homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3B1I1	1.7e-74	83.83	lipoxygenase homology domain-containing protein 1-like OS=Cucumis melo OX=3656 G...	[more]
A0A6J1KL50	3.8e-74	78.69	PLAT domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC11149673...	[more]

BLAST of CsaV3_6G045540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39730.1	1.4e-57	64.15	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT2G22170.1	3.2e-57	62.13	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT5G65158.1	1.0e-34	66.00	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 54..171 e-value: 5.1E-13 score: 49.6
IPR001024	PLAT/LH2 domain	PROSITE	PS50095	PLAT	coord: 52..179 score: 24.349747
None	No IPR available	GENE3D	2.60.60.20	PLAT/LH2 domain	coord: 53..169 e-value: 1.8E-19 score: 72.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..199
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 28..184
None	No IPR available	PANTHER	PTHR31718:SF48	PLAT-PLANT-STRESS PROTEIN	coord: 28..184
None	No IPR available	CDD	cd01754	PLAT_plant_stress	coord: 52..180 e-value: 3.83995E-78 score: 228.194
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 53..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G045540.1	CsaV3_6G045540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding