CsaV3_6G045150 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGTTTTTTGTTTTTTCGATAATTAATTAAAAGAATTAGGAAGGAATGAAAATTGAAAATTTATAACAGAAAAGGAACTAAGACACTAAATTTAAAAAAAGAGCACCAAAATTAGGGATGAATGAATGAAGTATAAATATAGCATATACAATAATATTAAATTATGAAGTATAATTTGATTTAAAACGAATGTTATTGATTGTGTAAGGAAAAAAAAGAAGGAAAGAAAAAAGAAAACGATGGAGTGAGGGTTTTTGTTTCTTGGAGAGGCCTCGTTAGTGTTTAGTATCCGGAAGGATGATGTGAATAATACGGCACCAGATCCAATTCCCTCCTCATGCGCGCTAAAAAGTAGGGGTCCTCTTCTTCCTCTCCCCATTACCCTCTTCTTACCCCCAACCCCTTTCCTCTTTTCCTCATTTTTCTCCTTACTAATATACCCATCACAATCCCATCTCTCTGTTTTCCCACAATTTTTCATGGAGCACCCGAAGCAGCAGGATTCCGATAACAAACCTCCTATCTCCACCCCCGATAACACCCCTAAATCTGATCCCAAAGACGGACCTCACGCCCCCAATGGAGATGGGAATTGGGCGAATTTCGTTATGGGTTCAGAGAACCAGATTCCTACCCAGAACGAGCAACCTGTGATTTCCACGCCCTCCAAGAAAACCGTGCGTTGGAGTACCGAATTGGTTACCGAGTCCCCTTCCGTTGCTTCTAATTCATATGGATCCAATACCAATACCTATGCTGCTTCCTCTCCTTCCTCTCCTTCCTCTTCAGTTTCCTTCAAGGGTATTGTTTCTCTTGGTTTGATATGCGCTTCTGTTTCATTCATTTGTATATGTCGCTTCTTGTGGTGGATACTTAGTTCTTGTGGTATTAAAAAAATTTCGATGCATTTTGATCAGAGACGGTGGATTCTGTGTGGAGCGCGCTAGGGAGATGGGGGAAGAAAGTCGGGGAAGCTACAAAAAAGGCTGAGGATCTGGCCGGAAACACTTGGCAGCATTGTAAGTTTCTCGTTGTTCCTGTTGGTTTGTTTTTGTTGGCCTTGCTATCCAGAACGACGATTGAGGGTGAAAAACTAGATTCAATTTCGAAATATAGTTTCTTCTCTTCATTTCTGTTTTGTTTTCACGAGGAAATTTTTTGCCCTTAAGCATTTGAGAGAAATTGGGAGCTTCGAAAAAGAAGTTTCTGATGGTTTCATGTCAGAAGGTTCATGTGGATGGGAGTGGGACATTTTCAAACTTTCCGTTCCCAAGTTCTTAATCAGTATTTATAGATGCAATCCAAACCAGCGTTAGACTTTGGCCTATTGGTTAAGGGTATATGCCTAAACCAATCAGGCTCTGGTTAGATTGTCAAAATGGCCGTTAGTTCTAACAGTTGGAATAAGAACTTAGGCGATTAATGGTAGTTCTTTTTCCTTTTTATGAGATGAGCTGGGATTGATAGAACAAGATTAACATAAAATTCGTATTTAAAATTTCTTTCTGCTTTCTGAGAACCAAAACAATGGGTTCAATTCAGAGGTTATATTATTTGGCAGTACTTATAAAATGGTTTTCAAAATTAAACGCTAAAGGTAGTTAACAAATATTTTTCCCTTTTAGATATAGGTTTAACTTTGTAATGTCATACTCAACTGTCTTGTTCTCGCCAATGGTTCTTTTTTTTTCCAGTACAAACAAGTTCACTCTGCTTCTATTGCAGTATCTTGCCCTGACATATTGTTTCAGTTTGATGTAAAATAGTTTCCTCTTATGAAGTAAAAGTGTAGGATGCCTTCTCATTTTATGAATATTGTCCAGTCAGCGTGGGTAGGAAAAATACATGAAATCCTTTACGAATTAATAGTCTTGCTTTCTGATCCATGTTTGAGGAACATGGCATGATCTTCTCCAGTTCATTGTAATCCAGATGAAGAATGAATTTTGTATTTGCCAAAGAAAACACTAGGCTGTTCTATCAGGTTATTTAGAAAATCTTTCAGGTGAGGTACCCTTTTTTGATTGAAACTCATCCCTGAACCATGTTGGCAGATTGTAAAATTCATCCTCAAAGTCTAGTAGGAACGTTTCTTCTTTCTCCCCATCAAGTTGATGAAATGACTAGTCTGCATTTGTGTCAATGTTAGTATCATCTTGGTGACAGGAGAAAACTTGTTTGCTAGTCTATCTTAATAGATGAGCTTTTGAGTGAATCCCTACCCAACAATTTTGATCTGCAACTTTTAATTGAGCTATTGGCTCGAAAGTTTATCTATTTGCACCTCATTCATCCTTTAGGTTAGGAAATTAGTACATTGGTTTTGCTAGCTTTTGGAGCACTTATTCCCTGCAGAGTTACCTCCTTCCATTTTACATGAAAACTCTTATTGTACCAATTATGAAGTCATAAAAATTGGCGAATGTTTTACATGAGGTGAGAGGTAGTCTGATAAAAGAAAGAATGTGAGATTACATATTGGCTTCATGCCTCCAAACTTGTGAGAAAAACTTGAATGCCAAGGTCATTTATAATCTCAAAGTATAGGTGAAAAAACTGTCTTTTATGACCTTCAGTGCTTGGGTTCGAGGAACAACCTTGTATTTGGTTGCTGAAAACTTTGTTATTCCTTCTTGAAAAGAAACTAAATTGACTTTTCCCTTGAGTAGCCTTTGATATATGGCTGTATGAAAAATATCTAAACTTACCTCCTTTCTTACTTATTGGACATAAAGTTGTGGTCTGGGTACAAGAAGGTGATATGATTCTCCCATACCTTTTGAGGATTAAATTGGAAGTATTCTTGCCTGTGGTTCTGAATAAGTCTTCAAAGTTGTCCCCCTCACGCTAAATTTAGGACAGAGGGGGCTTGCCAGTGGTGACAAAGAAATCCCTTGTGAGAAAATGAATTATTCTACCCCCTTGTCACCAATCGTCTTCTAGAAAAAATTGCTTACAGGACGTGAGTTCAACTTTGCTTCTATCATTGAGCTTTCCCTTCATCGGGAGGTTATATCAAAGATGGCTGGAACTAGAGAACAAACATTGTAAGATGCTATGAGTTTTTGAAAGTAAAGAAGGTGGGACAACTGTTACAGTCTATAGAGGTATGGGGTCACGGAGATTGGCTTCCTCAAGTAAAATTGTGGACCCCTTATTTGTGTCGCCAGGGTTTCAGCTATATTAGGGAGATGGTGGTTTTTCATTTCAACTACTCATTTATTTGGTGGGTCCATGTGGATACTTTGGTAAAAATGTGATATCTCGATGTTATCATTAAAAAGCTATCGTATGCACTTTTTGTTAATTACAGACCTCTCATAATCTTGAATCAAACTAAATGTAGCTATTTAAGGCGTATACCTTCAAATAAAGATGTTAGAGATTTGAATTCCCATCCAACGCTCATGTTGTTGTACTGAAAAAAATTACTCAACCAAGCTGCTCCCAGACTTGCCAATGTGGCCTCCCACCATCCATTTAACCATTTAGTTTTATGCGTGCCTGAAGGATCGCACCTTAGAGGTTACCAAAGCATGAGCGCATTAAGCCATTAAGCATTAAATAGACAGGGCTCCTGCTCCCTTAGAATCTCAAACTGCCTTGTCTTTAAGAATTCTAAACCTGGTGTGGGACTGGGTCTGGATCTGGATCATCTTGTTAATAATTTTGAAGAAATTCAATTAAGATCCATGTTTCTAATTTAGTACGGTAGTGAAAGAATGTTACATGTTGAAATATCACCATGAATAAGAGTAGAAGGTTTTAGTGTTCAGAAAGCTGACTTACATAAACAGTCAGAAATTTTTTTACTATTAATTCTTAAATAATGATAGAACTAAGGATACCCAATAAGTGAGTAGTTCTCTTGTTTTTTTTTCTTTTTTTTTTTTAATTTTTCATCATCTGCACAAAATGCTAAACATGAGTTAGCCTTTTCCCTTCGAATTCTCAAGTGTTCTAGTTTGTCTACCGTCTAACTAAGTTGCAATAACCCTGTATTTAGGCAGTGGCGCTCAAATTGATGGTTGGAGAGTTATTTTCGTCCTTGAGCCAAGAAAGAAGCAGAAAATAAGACATTGATTCGGACTTTAGGTGCACTCTAGTCTACACCAATTTTTGTGCATCTCACCATATTGTCCAATTAGAATTTGCTATTTTTTATATACGTGAGTGTCCATGCTAGCTTTACGCATACCTCAATTGATCTTATGGGACATTTCGTCTGACTCCTACAACATTTAGATATCACGGTAGCTCACGGAAAATTAATCCCATGAGTGGGATGGGATTTATACTTCTTTACAGACTAAGAATGTTACCCTAGAGGGGAAAAAATCAGTATCTACGACTTTCATTTACTTAGACGATGTTTCTTGGATCAGTGAAAACAAGTCCAAGTTTTGCGGATGCTGCGCTGGGGAGAATTGCTCAAGGGACAAAGGTATTAGCGGAAGGTGGCTATGAAAAGATTTTTCAACAAACTTTTGACACAGTGCCTGAGGAAAAACTTCAAAATTCGTTTGCTTGTTATCTGTCAACGTCTGCTGGTCCAGTTATGGGTGTATTGTATGTATCTACGGCAAAGCTTGCGTACTGTAGTGACAATCCTCTTTCATACAAGTCCGACGGGAGAACTGAATGGAGCTATTACAAGGTAATTTTAGTTAACCATACTTCTTAACTCATAGATAGTTTCTCTCTAGCTTGTTTCATTGTTATTTGATGCGATTTCGAATTTGCTAGACCACGTTGGTGGTTATGGATTTAATCTCTGCAACATATTTCATCTTTGTGAAAACAGGTAGTGATCCCATTACAGCAACTTAAGGCAGTTAATCCTTCCTCCAGTGGTATGAATCCTTCTGAAAAGTACATACAGGTAATCTCTGGTGATAACCATGAATTTTGGTTCATGGGGTTCTTAAACTACAACGGTGCTGTAGAATGCCTGCTAGAATTTCCTGAATTACAAGCAATGCAATCGGTGTAAAACGTCGTCGTAGTTGAATCTTCCACCAGTTCACATGTGGCACAACAAAGACTAAGAGTTGGTGAATTCAATCAAACTTCCATTTGAATTTGCTGCTATTGTATACCAACTTTGGAGATATTACTAATGGAAGGTGTCTTCCCTTTATTGGAATTTCCCAGTAAATTTTTGGAATCAGTTAGGAAAACTTATGATTATAGCTTCTTCAAATTTCATATAGATTGTTGATTGTGTACATGGTGTCTTAAGGATTAAGCATTCAGATAAAAATAAATGCTTTTCTGGTACAGATTATTACATTGTAACATGCCAGCAGTAAAACTGTCTGCTGTCATAATTGGGCCGAATTTATAGTTAAATTAATTTATTTTTAAAGGAAATGATAGGGTTCATCATAATCCGATGGGTATTTGGTCCCTCCCTCTAGTTCTATGTTTGATTCTTTTGCCCACTTGTACTTCTCTTTTTCTCTGTTTATTCTCTCGGCAATGATATTGTATCAATTTCTTTTCAGAATAAAGAACATGGACATTATGATATTCGTACATAGTACGAAATGTTCAAATGCTATTTCAACCATATTGAATATGTTTGTAGCACATAAATGTTGGATTATTATTTTATAATTGAGTTAATATATTATCCATTGTTCAATCTTAA ATGGAGCACCCGAAGCAGCAGGATTCCGATAACAAACCTCCTATCTCCACCCCCGATAACACCCCTAAATCTGATCCCAAAGACGGACCTCACGCCCCCAATGGAGATGGGAATTGGGCGAATTTCGTTATGGGTTCAGAGAACCAGATTCCTACCCAGAACGAGCAACCTGTGATTTCCACGCCCTCCAAGAAAACCGTGCGTTGGAGTACCGAATTGGTTACCGAGTCCCCTTCCGTTGCTTCTAATTCATATGGATCCAATACCAATACCTATGCTGCTTCCTCTCCTTCCTCTCCTTCCTCTTCAGTTTCCTTCAAGGAGACGGTGGATTCTGTGTGGAGCGCGCTAGGGAGATGGGGGAAGAAAGTCGGGGAAGCTACAAAAAAGGCTGAGGATCTGGCCGGAAACACTTGGCAGCATTTGAAAACAAGTCCAAGTTTTGCGGATGCTGCGCTGGGGAGAATTGCTCAAGGGACAAAGGTATTAGCGGAAGGTGGCTATGAAAAGATTTTTCAACAAACTTTTGACACAGTGCCTGAGGAAAAACTTCAAAATTCGTTTGCTTGTTATCTGTCAACGTCTGCTGGTCCAGTTATGGGTGTATTGTATGTATCTACGGCAAAGCTTGCGTACTGTAGTGACAATCCTCTTTCATACAAGTCCGACGGGAGAACTGAATGGAGCTATTACAAGGTAGTGATCCCATTACAGCAACTTAAGGCAGTTAATCCTTCCTCCAGTGGTATGAATCCTTCTGAAAAGTACATACAGGTAATCTCTGGTGATAACCATGAATTTTGGTTCATGGGGTTCTTAAACTACAACGGTGCTGTAGAATGCCTGCTAGAATTTCCTGAATTACAAGCAATGCAATCGGTGTAA ATGGAGCACCCGAAGCAGCAGGATTCCGATAACAAACCTCCTATCTCCACCCCCGATAACACCCCTAAATCTGATCCCAAAGACGGACCTCACGCCCCCAATGGAGATGGGAATTGGGCGAATTTCGTTATGGGTTCAGAGAACCAGATTCCTACCCAGAACGAGCAACCTGTGATTTCCACGCCCTCCAAGAAAACCGTGCGTTGGAGTACCGAATTGGTTACCGAGTCCCCTTCCGTTGCTTCTAATTCATATGGATCCAATACCAATACCTATGCTGCTTCCTCTCCTTCCTCTCCTTCCTCTTCAGTTTCCTTCAAGGAGACGGTGGATTCTGTGTGGAGCGCGCTAGGGAGATGGGGGAAGAAAGTCGGGGAAGCTACAAAAAAGGCTGAGGATCTGGCCGGAAACACTTGGCAGCATTTGAAAACAAGTCCAAGTTTTGCGGATGCTGCGCTGGGGAGAATTGCTCAAGGGACAAAGGTATTAGCGGAAGGTGGCTATGAAAAGATTTTTCAACAAACTTTTGACACAGTGCCTGAGGAAAAACTTCAAAATTCGTTTGCTTGTTATCTGTCAACGTCTGCTGGTCCAGTTATGGGTGTATTGTATGTATCTACGGCAAAGCTTGCGTACTGTAGTGACAATCCTCTTTCATACAAGTCCGACGGGAGAACTGAATGGAGCTATTACAAGGTAGTGATCCCATTACAGCAACTTAAGGCAGTTAATCCTTCCTCCAGTGGTATGAATCCTTCTGAAAAGTACATACAGGTAATCTCTGGTGATAACCATGAATTTTGGTTCATGGGGTTCTTAAACTACAACGGTGCTGTAGAATGCCTGCTAGAATTTCCTGAATTACAAGCAATGCAATCGGTGTAA MEHPKQQDSDNKPPISTPDNTPKSDPKDGPHAPNGDGNWANFVMGSENQIPTQNEQPVISTPSKKTVRWSTELVTESPSVASNSYGSNTNTYAASSPSSPSSSVSFKETVDSVWSALGRWGKKVGEATKKAEDLAGNTWQHLKTSPSFADAALGRIAQGTKVLAEGGYEKIFQQTFDTVPEEKLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDNPLSYKSDGRTEWSYYKVVIPLQQLKAVNPSSSGMNPSEKYIQVISGDNHEFWFMGFLNYNGAVECLLEFPELQAMQSV* Homology
BLAST of CsaV3_6G045150 vs. NCBI nr
Match: XP_004143450.1 (putative GEM-like protein 3 [Cucumis sativus] >KGN48719.1 hypothetical protein Csa_003389 [Cucumis sativus]) HSP 1 Score: 589.3 bits (1518), Expect = 1.8e-164 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. NCBI nr
Match: XP_008440566.1 (PREDICTED: putative GEM-like protein 3 [Cucumis melo] >KAA0036331.1 putative GEM-like protein 3 [Cucumis melo var. makuwa] >TYK12725.1 putative GEM-like protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 547.7 bits (1410), Expect = 6.0e-152 Identity = 277/294 (94.22%), Postives = 282/294 (95.92%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. NCBI nr
Match: XP_038880968.1 (GLABRA2 expression modulator [Benincasa hispida]) HSP 1 Score: 516.9 bits (1330), Expect = 1.1e-142 Identity = 261/294 (88.78%), Postives = 275/294 (93.54%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. NCBI nr
Match: XP_022978793.1 (GLABRA2 expression modulator-like [Cucurbita maxima]) HSP 1 Score: 489.6 bits (1259), Expect = 1.9e-134 Identity = 248/297 (83.50%), Postives = 266/297 (89.56%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. NCBI nr
Match: XP_023544206.1 (GLABRA2 expression modulator-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 488.8 bits (1257), Expect = 3.3e-134 Identity = 248/297 (83.50%), Postives = 266/297 (89.56%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 6.1e-83 Identity = 177/304 (58.22%), Postives = 213/304 (70.07%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 1.0e-69 Identity = 131/199 (65.83%), Postives = 156/199 (78.39%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2) HSP 1 Score: 260.0 bits (663), Expect = 3.3e-68 Identity = 149/258 (57.75%), Postives = 177/258 (68.60%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.2e-41 Identity = 90/205 (43.90%), Postives = 135/205 (65.85%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.6e-38 Identity = 90/239 (37.66%), Postives = 131/239 (54.81%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. ExPASy TrEMBL
Match: A0A0A0KIT3 (GRAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499140 PE=3 SV=1) HSP 1 Score: 589.3 bits (1518), Expect = 8.7e-165 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. ExPASy TrEMBL
Match: A0A5D3CMF8 (Putative GEM-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003130 PE=3 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 2.9e-152 Identity = 277/294 (94.22%), Postives = 282/294 (95.92%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. ExPASy TrEMBL
Match: A0A1S3B212 (putative GEM-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103484944 PE=3 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 2.9e-152 Identity = 277/294 (94.22%), Postives = 282/294 (95.92%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. ExPASy TrEMBL
Match: A0A6J1IUA8 (GLABRA2 expression modulator-like OS=Cucurbita maxima OX=3661 GN=LOC111478651 PE=3 SV=1) HSP 1 Score: 489.6 bits (1259), Expect = 9.3e-135 Identity = 248/297 (83.50%), Postives = 266/297 (89.56%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. ExPASy TrEMBL
Match: A0A6J1GFW5 (GLABRA2 expression modulator-like OS=Cucurbita moschata OX=3662 GN=LOC111453803 PE=3 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 5.1e-133 Identity = 247/297 (83.16%), Postives = 267/297 (89.90%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein ) HSP 1 Score: 308.9 bits (790), Expect = 4.3e-84 Identity = 177/304 (58.22%), Postives = 213/304 (70.07%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 ) HSP 1 Score: 265.0 bits (676), Expect = 7.2e-71 Identity = 131/199 (65.83%), Postives = 156/199 (78.39%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. TAIR 10
Match: AT4G40100.1 (GRAM domain family protein ) HSP 1 Score: 231.9 bits (590), Expect = 6.7e-61 Identity = 137/258 (53.10%), Postives = 165/258 (63.95%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. TAIR 10
Match: AT2G22475.2 (GRAM domain family protein ) HSP 1 Score: 226.1 bits (575), Expect = 3.7e-59 Identity = 135/246 (54.88%), Postives = 164/246 (66.67%), Query Frame = 0
BLAST of CsaV3_6G045150 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 171.8 bits (434), Expect = 8.3e-43 Identity = 90/205 (43.90%), Postives = 135/205 (65.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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