CsaV3_6G043540 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G043540
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	microtubule-associated protein RP/EB family member 1C-like
Location	chr6: 25667120 .. 25668812 (-)
RNA-Seq Expression	CsaV3_6G043540
Synteny	CsaV3_6G043540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACAAACATTGGGATGATGGATTCTGCTTATTTCGTTGGGAGATCGGAGATCCTCGCCTGGATCAACTCCACTCTTCACCTTAATCTTTCCAAAGTCGAGGAGGTTTCTCCCAGCACCCCTAATATCGATCCTTTTTTCTTTCATTCTTACTTGTTCCAAGATTTTTGAAATTTTCTTTGTTTAACCCTTATTACGATTACTCTTTTCATGGATTCTTGAATTGTAGGCATGCTCGGGTGCGGTTCATTGCCAATTGATGGATGCGGCTCACCCTGGGATGGTTCCAATGCACAAGGTCAACTTTGACGCGAAGAGCGAATACGAAATGATCCAGAATTATAAGGTTCTCCAAGATGTCTTCAACAAATTAAAAATCACCAAGGTATCTTTTTTTAATAGTCCGCTCCTTTAAACTTCATAGGTTAATCTTTTTTCTTTAAGAAATGTTGCTGATTGGAGTTTTCTATTGCGTTCTGTGTATTTTTTTGTGCACTTGATCTATATTTAGTTACTGGTTTCTTCGAAATGTTGTAGCATATCGAGGTGAGTAAGCTTGTGAAAGGAAGGCCTCTCGATAATCTGGAGTTCATGCAGTGGATGAAACGTTATTGTGATTCTGCTAATGGAGGTGTTTTTCAAAGGTAATCTTGTCTACTTTTAACTCAGTTACCATTATTGGTTTGTTATAAACATACTGCTTTTTACTCTCAATAATGTCTAAATCACCCTATTGGATCTAACCTGCAAATATTTTATGATTTGAACAATATAATTTCACAATGATCAACATCAATGTTTGGAAATTGATGATCGTAAAGAAGTTATTGGATTGTCAAAGTACACTACAATATGTTGACAGTTCAATTTTTGGTTTTCTTGTTAGTTATAATGCTTTGGAAAGGAGAGAAGCATCCAAGGGAGGAAAGGACGCTAGCAAAAAGAGCACCACATCACATTCTTCTGCAAAAGGTTCAACGGGTGCTACATCTAGGGCTCAGGTCTCTCAGAATGCTCGGAGAAATGAGGCATCAGTGAACTCTGGAAATCAGGCAGCGAATGCTTCAAAACCTTCATCAAATGGAGGATTGACTGCATATGATGAACAGGTATTTTCTGAAACTGAGTGAATTTCTTAGATTGTGATGAATAGTGGAGAGGATATATATATAGACTTACTAATGTCAAATGCAGATCACAACATTGAAACTGTCAATCGACAGCCTTGAGAAAGAGAGGGATTTCTACTTTGCAAAGCTAAGGGATATTGAGATACTCTGCCAGAGTCCAGAGATTGACAATTTGCCTGTACTTTTTCCAGAAATTCTCTTATTTTCTAACCATTTTATTTGGTCCTCTAGAATTTCAAGCCCATTGAGTTGAGCATTTCCATTTCGTTTTGTGTCAGGTTGTAGGAGCTATAAGGAAGATACTATATGCTATAGATGATGATGCATCAGTTGTGGCAGAAGCTCAAGCTATGGTGTCTGGTCAACGTAACGAACCAATCAATCTTTTGAGTCCAATCGCTGAAGTTTCTGATGAGAAACTAGGTTTAGAAACCCAGAAGAGAAAGAGTATTATCAATTTCGATGTAGATGTTGCTGGCATAACAAGTTTGTCTCCAAGGCAGAGGACATCTGATGCTTCTGATGTTCATTGCAGTGGGTCACCGCTTATGACCTACTAA

mRNA sequence

ATGGCAACAAACATTGGGATGATGGATTCTGCTTATTTCGTTGGGAGATCGGAGATCCTCGCCTGGATCAACTCCACTCTTCACCTTAATCTTTCCAAAGTCGAGGAGGCATGCTCGGGTGCGGTTCATTGCCAATTGATGGATGCGGCTCACCCTGGGATGGTTCCAATGCACAAGGTCAACTTTGACGCGAAGAGCGAATACGAAATGATCCAGAATTATAAGGTTCTCCAAGATGTCTTCAACAAATTAAAAATCACCAAGCATATCGAGGTGAGTAAGCTTGTGAAAGGAAGGCCTCTCGATAATCTGGAGTTCATGCAGTGGATGAAACGTTATTGTGATTCTGCTAATGGAGGTGTTTTTCAAAGTTATAATGCTTTGGAAAGGAGAGAAGCATCCAAGGGAGGAAAGGACGCTAGCAAAAAGAGCACCACATCACATTCTTCTGCAAAAGGTTCAACGGGTGCTACATCTAGGGCTCAGGTCTCTCAGAATGCTCGGAGAAATGAGGCATCAGTGAACTCTGGAAATCAGGCAGCGAATGCTTCAAAACCTTCATCAAATGGAGGATTGACTGCATATGATGAACAGATCACAACATTGAAACTGTCAATCGACAGCCTTGAGAAAGAGAGGGATTTCTACTTTGCAAAGCTAAGGGATATTGAGATACTCTGCCAGAGTCCAGAGATTGACAATTTGCCTGTTGTAGGAGCTATAAGGAAGATACTATATGCTATAGATGATGATGCATCAGTTGTGGCAGAAGCTCAAGCTATGGTGTCTGGTCAACGTAACGAACCAATCAATCTTTTGAGTCCAATCGCTGAAGTTTCTGATGAGAAACTAGGTTTAGAAACCCAGAAGAGAAAGAGTATTATCAATTTCGATGTAGATGTTGCTGGCATAACAAGTTTGTCTCCAAGGCAGAGGACATCTGATGCTTCTGATGTTCATTGCAGTGGGTCACCGCTTATGACCTACTAA

Coding sequence (CDS)

ATGGCAACAAACATTGGGATGATGGATTCTGCTTATTTCGTTGGGAGATCGGAGATCCTCGCCTGGATCAACTCCACTCTTCACCTTAATCTTTCCAAAGTCGAGGAGGCATGCTCGGGTGCGGTTCATTGCCAATTGATGGATGCGGCTCACCCTGGGATGGTTCCAATGCACAAGGTCAACTTTGACGCGAAGAGCGAATACGAAATGATCCAGAATTATAAGGTTCTCCAAGATGTCTTCAACAAATTAAAAATCACCAAGCATATCGAGGTGAGTAAGCTTGTGAAAGGAAGGCCTCTCGATAATCTGGAGTTCATGCAGTGGATGAAACGTTATTGTGATTCTGCTAATGGAGGTGTTTTTCAAAGTTATAATGCTTTGGAAAGGAGAGAAGCATCCAAGGGAGGAAAGGACGCTAGCAAAAAGAGCACCACATCACATTCTTCTGCAAAAGGTTCAACGGGTGCTACATCTAGGGCTCAGGTCTCTCAGAATGCTCGGAGAAATGAGGCATCAGTGAACTCTGGAAATCAGGCAGCGAATGCTTCAAAACCTTCATCAAATGGAGGATTGACTGCATATGATGAACAGATCACAACATTGAAACTGTCAATCGACAGCCTTGAGAAAGAGAGGGATTTCTACTTTGCAAAGCTAAGGGATATTGAGATACTCTGCCAGAGTCCAGAGATTGACAATTTGCCTGTTGTAGGAGCTATAAGGAAGATACTATATGCTATAGATGATGATGCATCAGTTGTGGCAGAAGCTCAAGCTATGGTGTCTGGTCAACGTAACGAACCAATCAATCTTTTGAGTCCAATCGCTGAAGTTTCTGATGAGAAACTAGGTTTAGAAACCCAGAAGAGAAAGAGTATTATCAATTTCGATGTAGATGTTGCTGGCATAACAAGTTTGTCTCCAAGGCAGAGGACATCTGATGCTTCTGATGTTCATTGCAGTGGGTCACCGCTTATGACCTACTAA

Protein sequence

MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGGVFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQAANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGAIRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVDVAGITSLSPRQRTSDASDVHCSGSPLMTY*

Homology

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BLAST of CsaV3_6G043540 vs. NCBI nr
Match: XP_004141898.1 (microtubule-associated protein RP/EB family member 1C [Cucumis sativus] >KAE8647503.1 hypothetical protein Csa_002899 [Cucumis sativus])

HSP 1 Score: 632.5 bits (1630), Expect = 2.1e-177
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQA 180
           VFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQA
Sbjct: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQA 180

Query: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGA 240
           ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGA
Sbjct: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGA 240

Query: 241 IRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVD 300
           IRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVD
Sbjct: 241 IRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVD 300

Query: 301 VAGITSLSPRQRTSDASDVHCSGSPLMTY 330
           VAGITSLSPRQRTSDASDVHCSGSPLMTY
Sbjct: 301 VAGITSLSPRQRTSDASDVHCSGSPLMTY 329

[Close]

BLAST of CsaV3_6G043540 vs. NCBI nr
Match: XP_008440321.1 (PREDICTED: microtubule-associated protein RP/EB family member 1C-like [Cucumis melo] >TYK12861.1 microtubule-associated protein RP/EB family member 1C-like [Cucumis melo var. makuwa])

HSP 1 Score: 618.2 bits (1593), Expect = 4.0e-173
Identity = 322/329 (97.87%), Postives = 323/329 (98.18%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQA 180
           V QSYNALERREASKGGKDASKKSTTSHSSAKGSTGA SRAQVSQNARRNEASVNSGNQA
Sbjct: 121 VVQSYNALERREASKGGKDASKKSTTSHSSAKGSTGAASRAQVSQNARRNEASVNSGNQA 180

Query: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGA 240
           ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEID LPVVGA
Sbjct: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDELPVVGA 240

Query: 241 IRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVD 300
           IRKILYAIDDDASVVAEAQAMVSG  NEPINLLSPIAEVSDEKL LETQKRKSIINFDVD
Sbjct: 241 IRKILYAIDDDASVVAEAQAMVSGHHNEPINLLSPIAEVSDEKLSLETQKRKSIINFDVD 300

Query: 301 VAGITSLSPRQRTSDASDVHCSGSPLMTY 330
           VAGIT+LSPRQRTSDASDVHCSGSPLMTY
Sbjct: 301 VAGITTLSPRQRTSDASDVHCSGSPLMTY 329

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BLAST of CsaV3_6G043540 vs. NCBI nr
Match: XP_038883112.1 (microtubule-associated protein RP/EB family member 1C-like [Benincasa hispida])

HSP 1 Score: 600.9 bits (1548), Expect = 6.6e-168
Identity = 312/329 (94.83%), Postives = 319/329 (96.96%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQA 180
           V QSYNALERREASKGGKDA+KKSTTSHSSAKGST A SRAQVSQNARRNEASVNSGNQA
Sbjct: 121 VLQSYNALERREASKGGKDANKKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQA 180

Query: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGA 240
           ANASKPSSNGGLTAYDEQIT LKLSIDSLEKERDFYFAKLRDIEILCQ+PEI++LPVVGA
Sbjct: 181 ANASKPSSNGGLTAYDEQITALKLSIDSLEKERDFYFAKLRDIEILCQTPEIESLPVVGA 240

Query: 241 IRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVD 300
           IRKILYA+DDDASVVAEAQAMVS  +NEPINLLSPIAEVSDEKL LETQKRKS INFDVD
Sbjct: 241 IRKILYAVDDDASVVAEAQAMVSVHQNEPINLLSPIAEVSDEKLTLETQKRKSFINFDVD 300

Query: 301 VAGITSLSPRQRTSDASDVHCSGSPLMTY 330
           VAGI +LSPRQR SDASDVHCSGSPLMTY
Sbjct: 301 VAGIITLSPRQRVSDASDVHCSGSPLMTY 329

[Close]

BLAST of CsaV3_6G043540 vs. NCBI nr
Match: XP_023544531.1 (microtubule-associated protein RP/EB family member 1C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 573.5 bits (1477), Expect = 1.1e-159
Identity = 298/329 (90.58%), Postives = 313/329 (95.14%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQA 180
           V   YNALERREASKGGKDASKKSTTSHSSAKGST A SRAQVSQNARRNEASVNSGNQ 
Sbjct: 121 VLLCYNALERREASKGGKDASKKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180

Query: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGA 240
           ANASKP SN G++AYDEQITTLKLSIDSLEKERDFYF+KLRDIEILCQSP+I++LP VGA
Sbjct: 181 ANASKPPSN-GVSAYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGA 240

Query: 241 IRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVD 300
           IRKILYA+DDDASVVAEAQAM+S  + E I+LLSPIAEVSDEKL LE+QKRKS+INFDVD
Sbjct: 241 IRKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVD 300

Query: 301 VAGITSLSPRQRTSDASDVHCSGSPLMTY 330
           V G+T+LSPR+R SDASDVHCSGSPLMTY
Sbjct: 301 VVGMTTLSPRRRVSDASDVHCSGSPLMTY 328

[Close]

BLAST of CsaV3_6G043540 vs. NCBI nr
Match: XP_022950119.1 (microtubule-associated protein RP/EB family member 1C-like [Cucurbita moschata] >KAG6604159.1 Microtubule-associated protein RP/EB family member 1C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 573.5 bits (1477), Expect = 1.1e-159
Identity = 297/329 (90.27%), Postives = 313/329 (95.14%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQA 180
           V Q YNALERREASKGGKDASKKSTTSHSSAKGST A SRAQVSQNARRNEAS+NSGNQ 
Sbjct: 121 VLQCYNALERREASKGGKDASKKSTTSHSSAKGSTAAASRAQVSQNARRNEASMNSGNQV 180

Query: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGA 240
           AN SKP SN G++AYDEQITTLKLSIDSLEKERDFYF+KLRDIEILCQSP+I++LP VGA
Sbjct: 181 ANVSKPPSN-GVSAYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGA 240

Query: 241 IRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVD 300
           IRKILYA+DDDASVVAEAQAM+S  + E I+LLSPIAEVSDEKL LE+QKRKS+INFDVD
Sbjct: 241 IRKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVD 300

Query: 301 VAGITSLSPRQRTSDASDVHCSGSPLMTY 330
           V G+T+LSPR+R SDASDVHCSGSPLMTY
Sbjct: 301 VVGMTTLSPRRRVSDASDVHCSGSPLMTY 328

[Close]

BLAST of CsaV3_6G043540 vs. ExPASy Swiss-Prot
Match: Q9FGQ6 (Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana OX=3702 GN=EB1C PE=1 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.6e-111
Identity = 228/341 (66.86%), Postives = 262/341 (76.83%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTL LNLSKVEEACSGAVHCQLMD+ HPG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMK+YCDS NGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120

Query: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAK-GSTGATSRAQVSQNARRNEASVN---- 180
              +Y+ALERREASKGGK+A+K++  +  S K  S+ A  R   S   R++E   N    
Sbjct: 121 Q-HNYHALERREASKGGKEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQSNNTGT 180

Query: 181 ---SGNQAANASKPSSNGG--LTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSP 240
              S     ++SKPS+     + AYDE+IT LKL IDSLEKERDFYF+KLRD+EILCQ+P
Sbjct: 181 HHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEILCQNP 240

Query: 241 EIDNLPVVGAIRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLG--LET 300
           + ++LP+VG+I++ILYA D +    AE Q             LSPIAE S+E+     E+
Sbjct: 241 DTEHLPLVGSIKRILYAADGEDVGAAETQT------------LSPIAEGSEERRNSVTES 300

Query: 301 QKRKSIINFDVDVAGITSLSPRQRTSDASDVHCSG-SPLMT 329
           QKRK I+N DVDVA IT+LSPRQR SDASDV CSG SPL+T
Sbjct: 301 QKRKLIVNLDVDVAAITTLSPRQRLSDASDVKCSGSSPLLT 328

[Close]

BLAST of CsaV3_6G043540 vs. ExPASy Swiss-Prot
Match: Q7XJ60 (Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana OX=3702 GN=EB1A PE=1 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.6e-77
Identity = 160/286 (55.94%), Postives = 206/286 (72.03%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGR+EIL WIN  LHLNLS+VEEA SGAV CQ++D   PG+VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAK+EY+MIQNYKVLQDVFNKLKITK +E+++LVKGRPLDNLEF+QW+KR+CDS NGG
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 VF-QSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQN-ARRNEASVNSGN 180
           +  ++YN +ERR  S+ GK+          S KGS       Q + N    N +SV  G 
Sbjct: 121 IMNENYNPVERR--SRNGKE---------RSVKGSNKIPKSLQTNNNHPPPNSSSV--GL 180

Query: 181 QAANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVV 240
             A+  K +    + A  +++  LK+S D LEKERDFYF+KLRD+EILCQ+PE+D+LP+V
Sbjct: 181 SKASGPKSAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIV 240

Query: 241 GAIRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKL 285
            A++KILYA D + S + +AQ  +    N+ + +    AE + E+L
Sbjct: 241 VAVKKILYATDANESALEDAQEYL----NQSLGVEDDEAEGNGEQL 269

[Close]

BLAST of CsaV3_6G043540 vs. ExPASy Swiss-Prot
Match: Q9FJJ5 (Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana OX=3702 GN=EB1B PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.4e-75
Identity = 149/260 (57.31%), Postives = 196/260 (75.38%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGR+EIL+WIN  LHLNLS++EEA SGAV CQ++D   PG+VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NF+AK+EYEMIQNYKV+Q+VF KLKITK +EV++LVKGRPLDNLEF+QW+KR+CDS NGG
Sbjct: 61  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 VF-QSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQ 180
           +  ++YN +ERR  S+GG++ S K ++  S +  +         + N         S   
Sbjct: 121 IMNENYNPVERR--SRGGREKSVKGSSKISKSLQTNNMHHPPVATSNKPAGPKQAKSHGI 180

Query: 181 AANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVG 240
              +   +S+  + A  +++  LK+S+D LEKERDFYF+KLRDIEILCQ+PE+D+LP+V 
Sbjct: 181 GGGS---NSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLPIVV 240

Query: 241 AIRKILYAIDDDASVVAEAQ 260
           A++KILYA D + SV+ EAQ
Sbjct: 241 AVKKILYATDANESVLEEAQ 255

[Close]

BLAST of CsaV3_6G043540 vs. ExPASy Swiss-Prot
Match: Q9UPY8 (Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens OX=9606 GN=MAPRE3 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-39
Identity = 98/252 (38.89%), Postives = 143/252 (56.75%), Query Frame = 0


Query: 14  VGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKVNFDAKSEYEMIQN 73
           + R ++LAW+N +LHLN +K+E+ CSGA +CQ MD   PG V + KV F AK E+E I N
Sbjct: 15  LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHN 74

Query: 74  YKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGGVFQSYNALERREA 133
           +KVLQ  F K+ + K I V KLVKG+  DN EF+QW K++ D+   G  + YN L  R+ 
Sbjct: 75  FKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG--KDYNPLLARQ- 134

Query: 134 SKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQAANASKP------- 193
              G+D +            S      A   + +     ++ +  + +N + P       
Sbjct: 135 ---GQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNP 194

Query: 194 --SSNGG------LTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVV 251
             + NGG      +   ++Q+  LKL++D LEKERDFYF+KLRDIE++CQ  E +N PV+
Sbjct: 195 PSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVI 254

[Close]

BLAST of CsaV3_6G043540 vs. ExPASy Swiss-Prot
Match: Q6PER3 (Microtubule-associated protein RP/EB family member 3 OS=Mus musculus OX=10090 GN=Mapre3 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-39
Identity = 103/255 (40.39%), Postives = 148/255 (58.04%), Query Frame = 0


Query: 14  VGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKVNFDAKSEYEMIQN 73
           + R ++LAW+N +LHLN +K+E+ CSGA +CQ MD   PG V + KV F AK E+E I N
Sbjct: 15  LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHN 74

Query: 74  YKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGGVFQSYNALERREA 133
           +KVLQ  F K+ + K I V KLVKG+  DN EF+QW K++ D+   G  + YN L  R+ 
Sbjct: 75  FKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG--KDYNPLLARQG 134

Query: 134 -------SKGGK--DASKK----STTSHSSAKGSTGATSRAQVSQNA-----RRNEASVN 193
                  + G +  + SKK    +    +S  G     +  ++S  A     R+N  S  
Sbjct: 135 QDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNPPSAR 194

Query: 194 SGNQAANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNL 251
           +G   A+A        +   ++Q+  LKL++D LEKERDFYF+KLRDIE++CQ  E +N 
Sbjct: 195 NGGHEADAQ-------ILELNQQLLDLKLTVDGLEKERDFYFSKLRDIELICQEHESENS 254

[Close]

BLAST of CsaV3_6G043540 vs. ExPASy TrEMBL
Match: A0A5D3CM17 (Microtubule-associated protein RP/EB family member 1C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004530 PE=3 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 1.9e-173
Identity = 322/329 (97.87%), Postives = 323/329 (98.18%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQA 180
           V QSYNALERREASKGGKDASKKSTTSHSSAKGSTGA SRAQVSQNARRNEASVNSGNQA
Sbjct: 121 VVQSYNALERREASKGGKDASKKSTTSHSSAKGSTGAASRAQVSQNARRNEASVNSGNQA 180

Query: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGA 240
           ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEID LPVVGA
Sbjct: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDELPVVGA 240

Query: 241 IRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVD 300
           IRKILYAIDDDASVVAEAQAMVSG  NEPINLLSPIAEVSDEKL LETQKRKSIINFDVD
Sbjct: 241 IRKILYAIDDDASVVAEAQAMVSGHHNEPINLLSPIAEVSDEKLSLETQKRKSIINFDVD 300

Query: 301 VAGITSLSPRQRTSDASDVHCSGSPLMTY 330
           VAGIT+LSPRQRTSDASDVHCSGSPLMTY
Sbjct: 301 VAGITTLSPRQRTSDASDVHCSGSPLMTY 329

[Close]

BLAST of CsaV3_6G043540 vs. ExPASy TrEMBL
Match: A0A1S3B1G3 (microtubule-associated protein RP/EB family member 1C-like OS=Cucumis melo OX=3656 GN=LOC103484804 PE=3 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 1.9e-173
Identity = 322/329 (97.87%), Postives = 323/329 (98.18%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQA 180
           V QSYNALERREASKGGKDASKKSTTSHSSAKGSTGA SRAQVSQNARRNEASVNSGNQA
Sbjct: 121 VVQSYNALERREASKGGKDASKKSTTSHSSAKGSTGAASRAQVSQNARRNEASVNSGNQA 180

Query: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGA 240
           ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEID LPVVGA
Sbjct: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDELPVVGA 240

Query: 241 IRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVD 300
           IRKILYAIDDDASVVAEAQAMVSG  NEPINLLSPIAEVSDEKL LETQKRKSIINFDVD
Sbjct: 241 IRKILYAIDDDASVVAEAQAMVSGHHNEPINLLSPIAEVSDEKLSLETQKRKSIINFDVD 300

Query: 301 VAGITSLSPRQRTSDASDVHCSGSPLMTY 330
           VAGIT+LSPRQRTSDASDVHCSGSPLMTY
Sbjct: 301 VAGITTLSPRQRTSDASDVHCSGSPLMTY 329

[Close]

BLAST of CsaV3_6G043540 vs. ExPASy TrEMBL
Match: A0A6J1GEV8 (microtubule-associated protein RP/EB family member 1C-like OS=Cucurbita moschata OX=3662 GN=LOC111453299 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 5.5e-160
Identity = 297/329 (90.27%), Postives = 313/329 (95.14%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQA 180
           V Q YNALERREASKGGKDASKKSTTSHSSAKGST A SRAQVSQNARRNEAS+NSGNQ 
Sbjct: 121 VLQCYNALERREASKGGKDASKKSTTSHSSAKGSTAAASRAQVSQNARRNEASMNSGNQV 180

Query: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGA 240
           AN SKP SN G++AYDEQITTLKLSIDSLEKERDFYF+KLRDIEILCQSP+I++LP VGA
Sbjct: 181 ANVSKPPSN-GVSAYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGA 240

Query: 241 IRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVD 300
           IRKILYA+DDDASVVAEAQAM+S  + E I+LLSPIAEVSDEKL LE+QKRKS+INFDVD
Sbjct: 241 IRKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVD 300

Query: 301 VAGITSLSPRQRTSDASDVHCSGSPLMTY 330
           V G+T+LSPR+R SDASDVHCSGSPLMTY
Sbjct: 301 VVGMTTLSPRRRVSDASDVHCSGSPLMTY 328

[Close]

BLAST of CsaV3_6G043540 vs. ExPASy TrEMBL
Match: A0A6J1IIV4 (microtubule-associated protein RP/EB family member 1C-like OS=Cucurbita maxima OX=3661 GN=LOC111477857 PE=3 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 2.1e-159
Identity = 296/329 (89.97%), Postives = 311/329 (94.53%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQA 180
           V Q YNALERREASKGGKDASKKSTTSHSSAKGST A SRAQVSQNARRNEASVNSGNQ 
Sbjct: 121 VLQCYNALERREASKGGKDASKKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180

Query: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGA 240
           AN SKP SN G++AYDEQITTLKLSIDSLEKERDFYF+KLRDIEILCQSP+I++LP VGA
Sbjct: 181 ANVSKPPSN-GVSAYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGA 240

Query: 241 IRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVD 300
           IRKILYA+DDDASVVAEAQAM+S  + E I+LLSPIAE SDEKL LE+QKRKS+INFDVD
Sbjct: 241 IRKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEASDEKLSLESQKRKSVINFDVD 300

Query: 301 VAGITSLSPRQRTSDASDVHCSGSPLMTY 330
             G+T+LSPR+R SDASDVHCSGSPLMTY
Sbjct: 301 AVGMTTLSPRRRVSDASDVHCSGSPLMTY 328

[Close]

BLAST of CsaV3_6G043540 vs. ExPASy TrEMBL
Match: A0A6J1BTB1 (microtubule-associated protein RP/EB family member 1C-like OS=Momordica charantia OX=3673 GN=LOC111005364 PE=3 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 3.0e-158
Identity = 296/329 (89.97%), Postives = 310/329 (94.22%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNK KITKHIEVSKLVKGRPLDNLEFMQWMKRYCDS NGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKRKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNGG 120

Query: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQA 180
           V QSYNALERREASKGGK+ASK+STTSHSSAKGST A S+ Q+SQNAR+N+ SVNSGNQA
Sbjct: 121 VLQSYNALERREASKGGKEASKRSTTSHSSAKGST-AVSKPQISQNARKNDTSVNSGNQA 180

Query: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVGA 240
            N SKP SN GLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIE+LCQSPEI+NLPVVGA
Sbjct: 181 VNVSKPPSN-GLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIELLCQSPEIENLPVVGA 240

Query: 241 IRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLGLETQKRKSIINFDVD 300
           IRKILYA+DDDASVVAEAQAMVS  + E  N+LSPIAEVSDEKL LE+QKRK+IIN DVD
Sbjct: 241 IRKILYAVDDDASVVAEAQAMVSAHQKERTNILSPIAEVSDEKLTLESQKRKNIINLDVD 300

Query: 301 VAGITSLSPRQRTSDASDVHCSGSPLMTY 330
           VAGIT+LSPRQR SDASDVHCSGSPLMTY
Sbjct: 301 VAGITTLSPRQRVSDASDVHCSGSPLMTY 327

[Close]

BLAST of CsaV3_6G043540 vs. TAIR 10
Match: AT5G67270.1 (end binding protein 1C )

HSP 1 Score: 404.1 bits (1037), Expect = 1.1e-112
Identity = 228/341 (66.86%), Postives = 262/341 (76.83%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTL LNLSKVEEACSGAVHCQLMD+ HPG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMK+YCDS NGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120

Query: 121 VFQSYNALERREASKGGKDASKKSTTSHSSAK-GSTGATSRAQVSQNARRNEASVN---- 180
              +Y+ALERREASKGGK+A+K++  +  S K  S+ A  R   S   R++E   N    
Sbjct: 121 Q-HNYHALERREASKGGKEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQSNNTGT 180

Query: 181 ---SGNQAANASKPSSNGG--LTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSP 240
              S     ++SKPS+     + AYDE+IT LKL IDSLEKERDFYF+KLRD+EILCQ+P
Sbjct: 181 HHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEILCQNP 240

Query: 241 EIDNLPVVGAIRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKLG--LET 300
           + ++LP+VG+I++ILYA D +    AE Q             LSPIAE S+E+     E+
Sbjct: 241 DTEHLPLVGSIKRILYAADGEDVGAAETQT------------LSPIAEGSEERRNSVTES 300

Query: 301 QKRKSIINFDVDVAGITSLSPRQRTSDASDVHCSG-SPLMT 329
           QKRK I+N DVDVA IT+LSPRQR SDASDV CSG SPL+T
Sbjct: 301 QKRKLIVNLDVDVAAITTLSPRQRLSDASDVKCSGSSPLLT 328

[Close]

BLAST of CsaV3_6G043540 vs. TAIR 10
Match: AT3G47690.1 (microtubule end binding protein EB1A )

HSP 1 Score: 289.3 bits (739), Expect = 4.0e-78
Identity = 160/286 (55.94%), Postives = 206/286 (72.03%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGR+EIL WIN  LHLNLS+VEEA SGAV CQ++D   PG+VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAK+EY+MIQNYKVLQDVFNKLKITK +E+++LVKGRPLDNLEF+QW+KR+CDS NGG
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 VF-QSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQN-ARRNEASVNSGN 180
           +  ++YN +ERR  S+ GK+          S KGS       Q + N    N +SV  G 
Sbjct: 121 IMNENYNPVERR--SRNGKE---------RSVKGSNKIPKSLQTNNNHPPPNSSSV--GL 180

Query: 181 QAANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVV 240
             A+  K +    + A  +++  LK+S D LEKERDFYF+KLRD+EILCQ+PE+D+LP+V
Sbjct: 181 SKASGPKSAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIV 240

Query: 241 GAIRKILYAIDDDASVVAEAQAMVSGQRNEPINLLSPIAEVSDEKL 285
            A++KILYA D + S + +AQ  +    N+ + +    AE + E+L
Sbjct: 241 VAVKKILYATDANESALEDAQEYL----NQSLGVEDDEAEGNGEQL 269

[Close]

BLAST of CsaV3_6G043540 vs. TAIR 10
Match: AT5G62500.1 (end binding protein 1B )

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-76
Identity = 149/260 (57.31%), Postives = 196/260 (75.38%), Query Frame = 0


Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGR+EIL+WIN  LHLNLS++EEA SGAV CQ++D   PG+VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NF+AK+EYEMIQNYKV+Q+VF KLKITK +EV++LVKGRPLDNLEF+QW+KR+CDS NGG
Sbjct: 61  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 VF-QSYNALERREASKGGKDASKKSTTSHSSAKGSTGATSRAQVSQNARRNEASVNSGNQ 180
           +  ++YN +ERR  S+GG++ S K ++  S +  +         + N         S   
Sbjct: 121 IMNENYNPVERR--SRGGREKSVKGSSKISKSLQTNNMHHPPVATSNKPAGPKQAKSHGI 180

Query: 181 AANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDNLPVVG 240
              +   +S+  + A  +++  LK+S+D LEKERDFYF+KLRDIEILCQ+PE+D+LP+V 
Sbjct: 181 GGGS---NSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLPIVV 240

Query: 241 AIRKILYAIDDDASVVAEAQ 260
           A++KILYA D + SV+ EAQ
Sbjct: 241 AVKKILYATDANESVLEEAQ 255

The following BLAST results are available for this feature:

BLAST of CsaV3_6G043540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141898.1	2.1e-177	100.00	microtubule-associated protein RP/EB family member 1C [Cucumis sativus] >KAE8647...	[more]
XP_008440321.1	4.0e-173	97.87	PREDICTED: microtubule-associated protein RP/EB family member 1C-like [Cucumis m...	[more]
XP_038883112.1	6.6e-168	94.83	microtubule-associated protein RP/EB family member 1C-like [Benincasa hispida]	[more]
XP_023544531.1	1.1e-159	90.58	microtubule-associated protein RP/EB family member 1C-like [Cucurbita pepo subsp...	[more]
XP_022950119.1	1.1e-159	90.27	microtubule-associated protein RP/EB family member 1C-like [Cucurbita moschata] ...	[more]

BLAST of CsaV3_6G043540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGQ6	1.6e-111	66.86	Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana OX...	[more]
Q7XJ60	5.6e-77	55.94	Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana OX...	[more]
Q9FJJ5	2.4e-75	57.31	Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana OX...	[more]
Q9UPY8	1.6e-39	38.89	Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens OX=9606 GN=...	[more]
Q6PER3	1.6e-39	40.39	Microtubule-associated protein RP/EB family member 3 OS=Mus musculus OX=10090 GN...	[more]

BLAST of CsaV3_6G043540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CM17	1.9e-173	97.87	Microtubule-associated protein RP/EB family member 1C-like OS=Cucumis melo var. ...	[more]
A0A1S3B1G3	1.9e-173	97.87	microtubule-associated protein RP/EB family member 1C-like OS=Cucumis melo OX=36...	[more]
A0A6J1GEV8	5.5e-160	90.27	microtubule-associated protein RP/EB family member 1C-like OS=Cucurbita moschata...	[more]
A0A6J1IIV4	2.1e-159	89.97	microtubule-associated protein RP/EB family member 1C-like OS=Cucurbita maxima O...	[more]
A0A6J1BTB1	3.0e-158	89.97	microtubule-associated protein RP/EB family member 1C-like OS=Momordica charanti...	[more]

BLAST of CsaV3_6G043540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67270.1	1.1e-112	66.86	end binding protein 1C	[more]
AT3G47690.1	4.0e-78	55.94	microtubule end binding protein EB1A	[more]
AT5G62500.1	1.7e-76	57.31	end binding protein 1B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 192..212
None	No IPR available	GENE3D	1.20.5.1430		coord: 192..269 e-value: 1.4E-22 score: 81.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..192
None	No IPR available	PANTHER	PTHR10623:SF29	MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1B	coord: 1..267
IPR036872	CH domain superfamily	GENE3D	1.10.418.10		coord: 6..133 e-value: 3.7E-53 score: 181.1
IPR036872	CH domain superfamily	SUPERFAMILY	47576	Calponin-homology domain, CH-domain	coord: 5..131
IPR004953	EB1, C-terminal	PFAM	PF03271	EB1	coord: 209..247 e-value: 5.4E-19 score: 68.1
IPR004953	EB1, C-terminal	PROSITE	PS51230	EB1_C	coord: 184..254 score: 15.318796
IPR001715	Calponin homology domain	PFAM	PF00307	CH	coord: 16..109 e-value: 9.5E-11 score: 41.8
IPR001715	Calponin homology domain	PROSITE	PS50021	CH	coord: 13..115 score: 17.652222
IPR027328	Microtubule-associated protein RP/EB	PANTHER	PTHR10623	MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER	coord: 1..267
IPR036133	EB1, C-terminal domain superfamily	SUPERFAMILY	140612	EB1 dimerisation domain-like	coord: 193..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G043540.1	CsaV3_6G043540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0005515	protein binding