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CsaV3_6G042980 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAATGTAACCCCCAATAGAAAATAGAAATTGTGCATTGAACTCATTATTTATTTACATCCAAAATTTGGACTATTTTATTTTCGTATTAAACAAAACCAACGAATTTAATTGAGAAATAGTTGAGAAAATTATTATTAAAAAAACAAAATAAATTCCTTAGAAGAACAGTGTTTGTTACAAAACCTTCGCTTTGAATTCTGCCCAGAAACGATGACTTCCTCTAATTCAGAAAGTTAGGGTTTCATTTCGCGATCTAACACCCACCGGAACCTCACCATATCCAATTGCCATGAACTGCGAAGTATGCCAACTCAAAGAACTGGTATTCTCTTTTTTCTTTTTCTCTTCACGTAATTTTACATATGAATTCCAACTGTGTCCTTTTCTCCATCGCCGCCGCCGTGTTAATCGATTTATCCTGCCTTATTCTATGTAGCAAGTTGAGCAGTTCGAGATACGCGAAGTTCTACGCTGTAAGCTTATGCCTTTGGGCCTCTTGTTCCTTGTTTTTTTTTAATATATAAAAAAGTATTAGTTGAACAAATTATACTTCGAATATCGTCGGTTGAAAATCTGTATGATATTTTATTATGAAGTAGTTGCTGGCTGAAAATTAATCGTTCAGTCTGGCTATGGTCTTCTTTCTGTGTCATCTGATCTAGTTCAGGGTAGTCTTTCCAATGACTGCCATAGTTTTGGGAGATGTAGAGGTATTTTTATACAATTGTTCTATGATGTGAGAAAATATGCTTCAATTTTTCAGTCAACTGAGGGCCAGTTTAAAACACGCTTAGATGAGAGTGAGGAGAAAATGTTTAGGCTTTAGTTGATCATTTTTCTGCTTAAACTACTCAGGATATTCAGGAAAATCTGACAAGTATTTGAGGTCACTCTGTGGACTAACTAAACCAACAAACGTTTAAATTCTTAAAATCTACCCTACACCCCCATCCCCAACACAACAACTTCAGGGCAGAGAAGTAAGCATATGAAGAAGGTTGATGATAGAGTTTAATTAGTAAAATGGTCCAGAGTTTGCAAAAAACAGTTAAAAAGACTGCTCAAAAGGGGGAAAAAGAAAGAGCTCGGGCACCAAGTGGAAAGGGGTGAAGAAAAAGAAAGGAAATAGTTGTGATTTAGTAGGATCTTGATTCTTTCAAGAGTTGGGTTGGAACTGTTTAGTGTTTATAGTATCTTGGTTCAGTCTGGGCCTCGTTTTATTTTGAAATCTGTGTTAGATTAATAAAGTTTGGGTTTTGATTTGGTAGTTGATTTCCTATTTTGCAATTTCGTTGTTTAGTTTTGAGTTCGGCTCATTTTGGAAGTGGGGTAGTTCGATGTTTTTTCTTTTTTGGATTTTTTGGCTGTTTTCTGTATCTTTGAACTGGGGTTTGTACCTCTCTCACTTGATTGATGAAAAGTGTAGTTTCAAAAACTAGAAAATTGTTCAAATGGAGGAAGAATTCCAAAGAAAGAATGTCTTTCTTCTTGTTTGTTGGTTCAATATATTTTAGTGGTTTTCTTTTTTAAATGGGAAATGAAAAAAAAAAAAAACAGTTTTAAAAGAAAGAAGCTGTAAACAGATCACTTCAGTTGACATTAATGAGAGGATAGTTATATTTACATAAGAGGTTATAGCATCTGCATCAACAAATGTTAAGTAAAATTTCTCTCCGTGAGTTTCCTAGTCTCTAAATCTTGAAAAATACATGTTTCCTTTTCAACTAATATTTCCAACGGGGTGGTCTTCATGGTTAGGTACTTAGGCACATTGGAGAACTACACCCCAAAAATCAGCTATTGGGGTGGGAGAGCCAAGCCACTTAAGTACCACATTGGTTATCCCATTCTAACCAATGTGGGGTAAAGACATTCCATAACTACCTTGGTTTCTAACATATTAGTGAGAACCTTTATCTTTTTAAGGAGCTACAGAGGAGCTGTTGAAAGAATTGGTAAGTATGTTTAGGAAAACAACATGTCACACCATTTTAGTAAATGGGGTAAGTATATATTTTGATGGTTGACAATCCTTGTTCCTACGATAACAGTGTGAGACTAAATACCGAAGTTCTCTGCATAATTGACTTTGTGGCTTGTTACCATTGGCCAAAACTTTCTAACGGGCTTTTTATTCCCTCTGCCATCAGAATCTTCTCAGACTGATTGACCCATCATTTGTTTTTTGGTGGAGAACTCTTAGGGCCTGGGTTTTTTCTGAACTTCGGAAGTAATTTGTATAGCTAAGTTAGACCTCCAATCATATGATCTCGCAACTAAGCCTCGAGGTAAAATAAAGGACTATTTCTTCAACAGTCTGATCATCCTTGTAAGAACAAACAATTATTCTGTTGTGGTTTCTTGCAAGACCTTTACAAGTCATGACCATATGGTCAGTTTAGGTCACACTCACATCCATACGCTCCAATTTGGATGTGAAATATTGAATTGAAATTTGAATCCAACTGATGAACCGTTACCAGTATCATGTCTTTATTTTCAACGTATACTTGGTTCTAGTAAGCGTAATTTTTCCTTTGCTCCTTGGAAAGGAAAAAAAAAGTTGTAGAACGCTGCAAACTGGATCCACATTTTTCATAACCTACTATTTGAGTGAATACTGTCTGTGGAAGCAGACATGATAGCAGTTAAGATGATGATAACTGATCTTACTGCTCCCTATCCTCATAGTCTTGATGAATATTTCTTTATGCTTAAGCTTCTGCTAAAATGAATGGTGGGTGAAACTGGATGTTTTTCTCCAAGAATTTGCTTCTCACACATGGCCATTCATTGTTGTGTTGACATATTGTTTATTGGCTTCATATGAAAACTTCATTTTATCAAACTTCATGGGAGATTTATTTTGAAAATTTGTCAGTAGTGAATTTTGAAGTCGGAGAGTTTGATTATTCACAACTGAAGAATGGAGAATTCTCTTTATTTTTCCAATCGGGCTTCATGATTGTCAAGTTTTATCAATTTCTGTTATTAGGCTAGACATGTCCACTCAGAATTTCTCCCAGAGCAGTTTTGTGGTAGCTGTAATGTCATGTCGGTGTCCAGAAGAATTGTATAGAAATTCAGTAGCAGAGAGGGAGAAAAAAGTCTAATTCTATTACTGATGAAAATTTTTAGACAGATTGCAATGCAATGTGATTGCCTTCTGCCAGACTAGGTAATGACTAGCAAGAACTAAAAAGTCAACCAACTACGAAGTATGAACTCTGTTAGCCATACGATCATATATTTATAACCTTATGCAATCATACCTACATGGCTTGGGAAATTGGTTTCTAATAATAAATAAATAGTTCAGGATCGACAGGTTATTATGCCTGAAATACTCTGGATGTTTGGTATGCCTATGTTCTTTGGGTCATATGACATGGTTATATTGCCTCTTAGCACAACATTCTCCTCTGCAGTCAGCTATATTTACTGTTTGTTGACTTTTGAGTTTGGAGAAATCTTTTATTTATTTAATTTCATATGGAGAACGACTATTCAGTTTGTTTATAATATGATGACATTTGTTTGACACTACATCAGGTATACTACACACAATTGTATTTCATCGAGCTTTAGGTCTTGTTCGGCCCAGAGACATTGATTTGGAGCTTTTTGATATTACTTATGTAAGTCTTAACTCATTAATCGATTAGTTCATCTCAATTTTTTATTTTCTGTTGGGTTGTAAAATATGAAATTTGTGCCCACATCATGTTTTATATAGGCTCATACAACACTAAAGCTTGGTGCTTAAATCATATTAAGATTTTAGATTATTTATTTAACAGGTCAAAACAAAATCCCTGTTTCTTCCCTCAACTCCCATCACTGCTTTACCTTAATAAGATTTTGGCTTATTAATTTAGTGGGTTAAAACAGAATTCCTTTTTCTACTGGATGGATGCATATTGTATTTTTTATCGATAAGTTAATATAATGAAAATTTTCAACAATAAAGCTTGAGGCATTACACGAGGCTGAAACTACTGAAATCTTCTATGTGAAATAAAATTGAATCTCAGATTCTTCTGGTCATATCTCGCATGGATTGTCGGCTTCTTTTATTTTTATTTTTATTTTTATTCTTTTGGGGACTTCTACAATTCTATTTATTGCCGTATAGGTGCAATGTGGAGACATTGAAGTTGAGAAGAAGATCGATGAGAAGATTGAGCAGTTCATTAATTGGGTAGAGAAACACCCAAACAAGAAAAGCCAGGTTTTAAAATGTTGTATCTTATTGGACATTGTGCTGGTTATTTCTATCTTTAATAATTAATTTCCCGTTTTTGTTGCAGATATGTTTATCCTTTTATCAAGAGAAAAATAAACAAGCCTCTTGGTTCACTAACAAAATTGAACGCTTTTATTGGGAACAATGGTATATCAATTTGCATGTGGCCCAACACATAAAAATACATTCTGGCAAGACTCACCAACAGAAAATTCTAGTTGATCCTGGAGGTACTTTTAATTGTTGCATTTATCATTAGTACTTGTAGTAGTGTTCCGTTCTCTCAGGGACAAATAATTTATACCGACCTTCCCTTTCTGTGCAGAGAGTGGATTGGATGAGAGAAGCATCCGCAGGACGACGCTGGAAGCTTCTCTTCGCGAGGTGTTGTTTCAAGTAATAAAGTTTGTGAATGAAAAGAAGGATCATGTTCCTGCTATACCAAGTCCAGATTGTGGTGTCGTTATTTTCCCCTATGAAATAACAATTCCTAGGTGAGTTGAATGAATGAAATTATTGACATGACTTTTTTCATGATTTGCCCTCTGCTTTTATAATTTGTATCATATGCTTTTCCACTCTCCATGTATTTCCCTATTCTATTACTTGAGTTTGGTGAACCTTGTTAAATCCTTGTATATCTTAAAAGACAAACTTGATCTTGTAACTCACTGGGTGCTTTCATGTTTATTCAATGGGAATTACACGATAGTTATGAGAGATAAAATTGGAAAAGAGTATGTATGCCCTGAAATTTGTTCCTACTAACACGAGGCTTTATTTTTTATGAACCCAAGTCCAATAGTTTGTACTGATTGAAAAATCCACAAAACTGTTTGCCTGAGTGGGGTTAATGGTTTCTTCCTCTTTGGTAATACGACTTCATTGATGAGGATTATTGGACTTCACTAACTTCTTGGTTTTGGCTGCCAAAGAGTTGTGGACTAACCTTCATGTATTGCCTTTTGTCTTTGCATCTCATTTCTTTGTGATTAATTATATATTCTGATTAAGAGAACTCTAAAGCGCTCATGGACTATTATAAAGTGCATATTTAATGGTATGTTGGCAATGATCAGTTCATCAGATTCTGCATTTGGAATGGACATGATCAAGAGGATGTTGCAAACTGGACACCCCACTATGCTCAGCTGATTATCAGAATTATGGAGCCTATACCAAGAATCTACCACATCTTGTCTCTATAAAAGGTTCCATTTCTTTTTTATGATCTCTATGGCATATTTGGTGTCATATTTTAAAAGTGATTGAATATTAGCGGAGTCGAGGAAAATATCCTCTGATTTTCCCAACAAAATCCTCTATCCATATTAGTACCCTGTCTTCTTTTTCTCGTTCTTTTTACACTATCCATTGTGAATATTGACACTAATCAATGTATATACACATTCAATGTCCATATTGTTAGTTACTAACCTTAAGATTATGGAGCAAGTAGGGTTTGTAGTGGACGGATTTATTAAAAGGTCAGTGTCCCTCTCACATTCCTGGTTTTTGTATTTTAATATTAATTTGAAGTGTTAAATTACAATATATGTTAAACAATACATTATTATTACTATATTATACTTTTGGTAAAGTGGTTGTGCCCCTTTCAAAA ATGAACTGCGAAGTATGCCAACTCAAAGAACTGCAAGTTGAGCAGTTCGAGATACGCGAAGTTCTACGCTGTATACTACACACAATTGTATTTCATCGAGCTTTAGGTCTTGTTCGGCCCAGAGACATTGATTTGGAGCTTTTTGATATTACTTATGTGCAATGTGGAGACATTGAAGTTGAGAAGAAGATCGATGAGAAGATTGAGCAGTTCATTAATTGGGTAGAGAAACACCCAAACAAGAAAAGCCAGATATGTTTATCCTTTTATCAAGAGAAAAATAAACAAGCCTCTTGGTTCACTAACAAAATTGAACGCTTTTATTGGGAACAATGGTATATCAATTTGCATGTGGCCCAACACATAAAAATACATTCTGGCAAGACTCACCAACAGAAAATTCTAGTTGATCCTGGAGAGAGTGGATTGGATGAGAGAAGCATCCGCAGGACGACGCTGGAAGCTTCTCTTCGCGAGGTGTTGTTTCAAGTAATAAAGTTTGTGAATGAAAAGAAGGATCATGTTCCTGCTATACCAAGTCCAGATTGTGGTGTCGTTATTTTCCCCTATGAAATAACAATTCCTAGTTCATCAGATTCTGCATTTGGAATGGACATGATCAAGAGGATGTTGCAAACTGGACACCCCACTATGCTCAGCTGA ATGAACTGCGAAGTATGCCAACTCAAAGAACTGCAAGTTGAGCAGTTCGAGATACGCGAAGTTCTACGCTGTATACTACACACAATTGTATTTCATCGAGCTTTAGGTCTTGTTCGGCCCAGAGACATTGATTTGGAGCTTTTTGATATTACTTATGTGCAATGTGGAGACATTGAAGTTGAGAAGAAGATCGATGAGAAGATTGAGCAGTTCATTAATTGGGTAGAGAAACACCCAAACAAGAAAAGCCAGATATGTTTATCCTTTTATCAAGAGAAAAATAAACAAGCCTCTTGGTTCACTAACAAAATTGAACGCTTTTATTGGGAACAATGGTATATCAATTTGCATGTGGCCCAACACATAAAAATACATTCTGGCAAGACTCACCAACAGAAAATTCTAGTTGATCCTGGAGAGAGTGGATTGGATGAGAGAAGCATCCGCAGGACGACGCTGGAAGCTTCTCTTCGCGAGGTGTTGTTTCAAGTAATAAAGTTTGTGAATGAAAAGAAGGATCATGTTCCTGCTATACCAAGTCCAGATTGTGGTGTCGTTATTTTCCCCTATGAAATAACAATTCCTAGTTCATCAGATTCTGCATTTGGAATGGACATGATCAAGAGGATGTTGCAAACTGGACACCCCACTATGCTCAGCTGA MNCEVCQLKELQVEQFEIREVLRCILHTIVFHRALGLVRPRDIDLELFDITYVQCGDIEVEKKIDEKIEQFINWVEKHPNKKSQICLSFYQEKNKQASWFTNKIERFYWEQWYINLHVAQHIKIHSGKTHQQKILVDPGESGLDERSIRRTTLEASLREVLFQVIKFVNEKKDHVPAIPSPDCGVVIFPYEITIPSSSDSAFGMDMIKRMLQTGHPTMLS* Homology
BLAST of CsaV3_6G042980 vs. NCBI nr
Match: XP_004141930.1 (autophagy-related protein 101 [Cucumis sativus] >KGN48497.1 hypothetical protein Csa_004034 [Cucumis sativus]) HSP 1 Score: 451.4 bits (1160), Expect = 4.4e-123 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. NCBI nr
Match: XP_008440236.1 (PREDICTED: autophagy-related protein 101 [Cucumis melo]) HSP 1 Score: 450.3 bits (1157), Expect = 9.7e-123 Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. NCBI nr
Match: XP_038883671.1 (autophagy-related protein 101 isoform X2 [Benincasa hispida]) HSP 1 Score: 445.3 bits (1144), Expect = 3.1e-121 Identity = 215/220 (97.73%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. NCBI nr
Match: XP_038883670.1 (autophagy-related protein 101 isoform X1 [Benincasa hispida]) HSP 1 Score: 438.0 bits (1125), Expect = 5.0e-119 Identity = 215/228 (94.30%), Postives = 219/228 (96.05%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. NCBI nr
Match: XP_023545159.1 (autophagy-related protein 101 [Cucurbita pepo subsp. pepo] >KAG7034361.1 Autophagy-related protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118 Identity = 212/220 (96.36%), Postives = 216/220 (98.18%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. ExPASy Swiss-Prot
Match: F4K265 (Autophagy-related protein 101 OS=Arabidopsis thaliana OX=3702 GN=ATG101 PE=1 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 1.7e-93 Identity = 169/219 (77.17%), Postives = 193/219 (88.13%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. ExPASy Swiss-Prot
Match: O13978 (Meiotically up-regulated gene 66 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mug66 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.4e-07 Identity = 53/203 (26.11%), Postives = 95/203 (46.80%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. ExPASy Swiss-Prot
Match: Q6DE58 (Autophagy-related protein 101 OS=Xenopus laevis OX=8355 GN=atg101 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 9.1e-07 Identity = 46/195 (23.59%), Postives = 91/195 (46.67%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. ExPASy Swiss-Prot
Match: A4IH75 (Autophagy-related protein 101 OS=Xenopus tropicalis OX=8364 GN=atg101 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06 Identity = 46/195 (23.59%), Postives = 91/195 (46.67%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. ExPASy Swiss-Prot
Match: Q3B736 (Autophagy-related protein 101 OS=Danio rerio OX=7955 GN=atg101 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 5.9e-06 Identity = 47/195 (24.10%), Postives = 91/195 (46.67%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. ExPASy TrEMBL
Match: A0A0A0KJH5 (Autophagy-related protein 101 OS=Cucumis sativus OX=3659 GN=Csa_6G490120 PE=3 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 2.1e-123 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. ExPASy TrEMBL
Match: A0A1S3B1D8 (Autophagy-related protein 101 OS=Cucumis melo OX=3656 GN=LOC103484751 PE=3 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 4.7e-123 Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. ExPASy TrEMBL
Match: A0A6J1IMY4 (Autophagy-related protein 101 OS=Cucurbita maxima OX=3661 GN=LOC111478858 PE=3 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 1.2e-118 Identity = 211/220 (95.91%), Postives = 216/220 (98.18%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. ExPASy TrEMBL
Match: A0A6J1GD29 (Autophagy-related protein 101 OS=Cucurbita moschata OX=3662 GN=LOC111453078 PE=3 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 1.6e-118 Identity = 211/220 (95.91%), Postives = 216/220 (98.18%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. ExPASy TrEMBL
Match: A0A6J1BU26 (Autophagy-related protein 101 OS=Momordica charantia OX=3673 GN=LOC111005695 PE=3 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 4.6e-110 Identity = 198/220 (90.00%), Postives = 207/220 (94.09%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. TAIR 10
Match: AT5G66930.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1649 (InterPro:IPR012445); Has 251 Blast hits to 251 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 85; Plants - 58; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 343.6 bits (880), Expect = 1.2e-94 Identity = 169/219 (77.17%), Postives = 193/219 (88.13%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. TAIR 10
Match: AT5G66930.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1649 (InterPro:IPR012445); Has 247 Blast hits to 247 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 89; Fungi - 83; Plants - 58; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 320.9 bits (821), Expect = 8.3e-88 Identity = 158/208 (75.96%), Postives = 182/208 (87.50%), Query Frame = 0
BLAST of CsaV3_6G042980 vs. TAIR 10
Match: AT5G66930.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1649 (InterPro:IPR012445); Has 236 Blast hits to 236 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 70; Plants - 56; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 239.2 bits (609), Expect = 3.2e-63 Identity = 114/141 (80.85%), Postives = 127/141 (90.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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