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CsaV3_6G042150 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACCTTTTCCTTCCATTGGTTCAAAATCCCGAACTTAAAAACGAAGTTTTTATATGCCAAGTTCTTCAAATAAGCAATACGCCCGAAAGTAGAGAGAATATTGCGGCAATAGTTACTGAAGAGGATATGATGATGAAGATGCCAGCAGTGACAATAATTTGGTGACATTATTTTTGTCACGAACACCATGCTTTCTAACATTCCATCCAATCCAAGGTGGATTTTAAAAAGTTGTGGTTTGAAATCAAAAGAGAGGATGATTGATATGATCGGAAAGCGTTGCATTCGTACAGGTGGAATGTTCACATTATAGGGTTTTGTGTACTAACAGAGCCAACATTTTATTGATTGGTACCTAAATCCATTTAAATTAGGATAATGGCAAGTGATACAAGACTTATAATTAAGTGTGTATTAAGAATTGCAACTATACCAAAATTTAATTGTAATAGACTATCGTTAGATCAACACACATATAAACGATAGGTTGTATCATTGATAGACTATATTGTAACATATTTTAAGAATAGCAAATATATTAAAATTTAATTATATTATAATTGATCAATATATCTCCGGTTTTATAGAAGATGAGTGGAATGTTTGTCTTTTCAATGGTCCATTAAATTATGGTAGGTCATGATCATCTCTCTAATCCAACTCACCATCATCCTAACTCCATCCCTTAAAAGGTTTCCACCACAAACAACACCCACTAATGGGTGCTCCCACCAGCACCACTTATGTTTTGAATCTCTTTTTCACCCAAAGATATCTTGCCTAAATGAACGATGGATCTCTTTTTAAAGTTCGTGGTTTTATTTTCCTTTTTAACAGAGGTAGACCGTAGAAGTGGGATTTAGACATTTTGTGTCTAATGATAATCTTAAATTGATTTGTCAGCATTACGTTCTTTATTGATCGATGTACATCATTCTCCAACTCCACATCTCAAACACATATGTTAGAGTATTTTCTTACCTCAATTTAATACCTCAATTCACCGCCTTCAACTCTCCCCGAATTTGCAATTCGACCAAAATAACAACAAAACAGAGGCACTGTTTTCTTCCCTCCTTTTCCATAATTCCACCTCATCGCCAGCTATTTCATTTCTATAAACATCTACCAGAACCACATAGTAAATCATTCATAAATCCATTGAATAGCAAAATGCTTATACAATAATCCAATTACTCTATAGTCACAATTCTTGATGTGACATAAAACAAAGACTTCTTGCTAATTAAAATAATATGTGTTCTTAATGCTCTCACTATTGAAATGGCAAAATGTAAGACCATAATATGAAAGAAAGCTAACAATATCTACTAACAAAGAAACTTTGATATGATTTATACCCACACAAAGATTTCTAGTATCACGTATTTATAGGAGAGAAGACAAACTTATGAACCATATCCAAAGTTTCTAATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCAATGGAACAATCAAAAAGGAAGATGTGGCCAATCAAGAGCTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATGATGATTGA ATGCACCTTTTCCTTCCATTGGTTCAAAATCCCGAACTTAAAAACGAAGTTTTTATATGCCAAGTTCTTCAAATAAGCAATACGCCCGAAAGTAGAGAGAATATTGCGGCAATAGTTACTGAAGAGGATATGATGATGAAGATGCCAGCAGAGAGAAGACAAACTTATGAACCATATCCAAAGTTTCTAATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCAATGGAACAATCAAAAAGGAAGATGTGGCCAATCAAGAGCTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATGATGATTGA ATGCACCTTTTCCTTCCATTGGTTCAAAATCCCGAACTTAAAAACGAAGTTTTTATATGCCAAGTTCTTCAAATAAGCAATACGCCCGAAAGTAGAGAGAATATTGCGGCAATAGTTACTGAAGAGGATATGATGATGAAGATGCCAGCAGAGAGAAGACAAACTTATGAACCATATCCAAAGTTTCTAATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCAATGGAACAATCAAAAAGGAAGATGTGGCCAATCAAGAGCTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATGATGATTGA MHLFLPLVQNPELKNEVFICQVLQISNTPESRENIAAIVTEEDMMMKMPAERRQTYEPYPKFLMMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD* Homology
BLAST of CsaV3_6G042150 vs. NCBI nr
Match: KAE8647476.1 (hypothetical protein Csa_003778 [Cucumis sativus]) HSP 1 Score: 296.6 bits (758), Expect = 1.2e-76 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. NCBI nr
Match: TYK12983.1 (hypothetical protein E5676_scaffold255G005800 [Cucumis melo var. makuwa]) HSP 1 Score: 166.0 bits (419), Expect = 2.5e-37 Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. NCBI nr
Match: EXB64484.1 (hypothetical protein L484_006721 [Morus notabilis]) HSP 1 Score: 114.0 bits (284), Expect = 1.1e-21 Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. NCBI nr
Match: PON52269.1 (hypothetical protein TorRG33x02_308860 [Trema orientale]) HSP 1 Score: 112.5 bits (280), Expect = 3.3e-21 Identity = 58/91 (63.74%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. NCBI nr
Match: PRQ49076.1 (hypothetical protein RchiOBHm_Chr2g0117891 [Rosa chinensis]) HSP 1 Score: 112.1 bits (279), Expect = 4.3e-21 Identity = 57/94 (60.64%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. ExPASy TrEMBL
Match: A0A0A0KFC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486830 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 4.4e-40 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. ExPASy TrEMBL
Match: A0A5D3CM35 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005800 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 1.2e-37 Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. ExPASy TrEMBL
Match: W9RA26 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006721 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 5.4e-22 Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. ExPASy TrEMBL
Match: A0A2P5BU01 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_308860 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.6e-21 Identity = 58/91 (63.74%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. ExPASy TrEMBL
Match: A0A2P6RRL4 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0117891 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.1e-21 Identity = 57/94 (60.64%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. TAIR 10
Match: AT4G09890.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12 Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 55.5 bits (132), Expect = 4.4e-08 Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06 Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 50.1 bits (118), Expect = 1.8e-06 Identity = 22/46 (47.83%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of CsaV3_6G042150 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 49.7 bits (117), Expect = 2.4e-06 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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