CsaV3_6G042050 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G042050
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	ribonuclease P protein subunit p25-like protein isoform X2
Location	chr6: 24597313 .. 24601430 (-)
RNA-Seq Expression	CsaV3_6G042050
Synteny	CsaV3_6G042050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTATTTGAAAAATTATTTTGATGGAGATGGAAGCATTATCCACACAGCTTTAGGATTGTAGACATTCCAAGTTTACCTATATTCAAATGGGCCAAATGGGCCGAAGAGGTGGATGTAAATTGGGCCGAAGAAAGAGAGTGAGATAGTGAAGATGGCGGAGGTAGGTGGCAGTGATCCAAGAGGATTACGTGCGGTCACGGCGGCGATAAGACCGGGACCTCAAAGCCCTACTCTCACTGGTTCATACTCGGCCACCCCTTTTCTTCTCCTTCTCCTTCTCTTTCTATATATTCTTCCTTCTTTCTCTTTACCCACCGGGGCCTTCGGAAAGGCGCTTCATTTTTCAATAAACCACCCAATACCCAATCATCAACACACACACACACAGACGGAGTGCTGTAGATTCTTCTACCTCTTTCCAAGCTTCTCCTGACATTCACTTCTTTCTTTCTTCTTCTACTACTGACCTCACCCACTTACGGTAATAATCAACTGGGCTGTTCATATTTTTGAGATTTGATTCATTTCTTTCTTAATCTTTCTGATGTGGGATTTTAGCTAATTTGTGTTTTGTTCTTTCTGGTCTCATCAGATGGATAGGTACCAGAGAGTGGAAAAGCCCAAGTCAGAGAATACTCCTATAAACGAGAATGAGATTCGCATTACTACTCAAGGAAGGATGAGAAATTACATTACTTATGCCACCACTCTTCTTCAGGTTCATTTCTTCGGGGGCTTTGTGTGTGTGTGTGTGTGTTTTTATGTTGCTGATGTAGAAGAATTATGGGTAATTGTTAATTATTTGAGTGAAGATGGTATAACCTCCAATGTGTACTTCCTAATTTTGTAGTGCTATTGCTTTTAATACTTGAAATGCCTGATTTGAGGCCAATTCTTTAGATACAGTACTGAAATGTCTAACTTCTGTTTCATTCTGTTATTTTATTTTTTAGTGCACCTTTTGCCTTGTAGAGATCTGGGAAAACTTGCTTTTGATATCGTTAACAGATATAGGTTGCTGCACATTTTCATTTTTTATTTTTGTTCTCATTTTTGGTAATTTCTAACAGTTGTTTCCTCCTAATGCATGTTCCTCTTTCACCTACAAACTCTCATAGTTGTTTATCCCTATCCGTATTAAACTTGATACTTTTCTCCACCCTAAAATAAAGTAGTTGCCACACGCTATAGCTTTCTCTCTCGTTTGCTGTTTGTTTGTTGCATCAAGAGCTTTTCTTGTATGTTTTGTTCTGCAACAATCTTTTGAAATTTATTTTGATTGTGATTGTGATTGCTGGTGTCTTTCACAGGAGAAAGGGTCAAACGAGATTGTTGTCAAGGGAATGGGCAGAGCTATTAATAAGACTGTTATGATAGCTGAGTTAATTAAGGTGGGGTTATTCTCTTTCCTGTGCTTGTTTTTTCTTGGTGTTCTTGTGATATCCTCTGTACTATCTACCTTTTCTCTGTTCAGAGAAGGATTGTTGGTCTCCATCAGAACACAGCAATTGGATCCACGGATATAACTGACATGTGGGAGCCACTTGAAGAAGGCCTTCTTCCGTATGAATTCCTACCCTTTCATATGCTTTTGAAAATTTACCGTTGTTAGTTTTGTAGTAAGGGAAAGCTCATTTTCCTTACTGTTGGCAGTCTCGAGACTACAAGACATGTTTCAATGGTGTCAATAACCTTGTCCAAGAAGGAGCTAGATACATCTTCTACAGGGTAAACATTTGTCATATTCCCTTTCAGAATGTATATTTTCTAATTTTAATATATTGATTTTGGGAATAATTGCACTTATGTGGTTTGGCTAATTTGTAAACTCTACCTCTATATTTAAAAATGGATTCAAGTCTAAGGATTGTGTCCTTTTGTTGAATATTACGATTAAATTTAGTAAACTTTGGTTCATGTGGTTTTATTTGAACGTGCTGTGATTAACATTAAATGGTCATCAATAATCATAGCACGTTTAGAATCACATATACTTGAGACCTTTTAATATAATGAGGACTCATGTGCAGTTTTTTATTAATCAGCGGTCTGAGCTGTGAAGTAACTATTACATGTTTTGGATTATAATTATTATTATAACGTTCCAGGCTCTTGAATATTTAAATAGATTTAGTTCTTAACCATCATTCTCATTTGTTTTTACTTTTATGAAGATACCAATCACCTCTTCCCGTTGACCAAGTGAAACCATGGAATGAATTTGAAGATGAAGGAGGTAAATTATATAAAATGATATTTTTTGTATCTTAATTCATTTGGGTTTAGTGATGAACTGATTTTAATTAATTTGCACCAATTTACTTTGATTTAGATGGATCACCTAGAATACGAGGTAGGGGACGTGGTAGAGGAAGAGGCAGGGGTAGAGGTAATATTCTTCTTTTTATTCTCTTAGATTGCGTTATATCTGATGTGTATGCATATTTTTTGGTTTGGATTTATTTAGTGTAACTGTATGCTGGTATCACTTTTCCTGTGTATGATATAGTAAATTTGGTACTTGCATTTTAGTAGTACATAATTAATCCAAAAGAATGACGTTGATGAGTTTCATTTTAAATAAAAATTACATTATAGTACAGAAAATAAGAAGACAAATGCTTGCAAGTAAAGCACTTCTTTTAAATGTACCTGATGCATTTTTCGGTTAATGAGAGATTTATTTTGGAACAATTGCAAATATAGCAATTAGATCCAAAGTATTAGTATATATAGCTACATTTTTTTTTAAAAGTGCACATATAGCAAAATTGGTCTATATTGAGATTTTGATATTTTTGTAAATTTTTTAAAATGTTGTTTCACTTGATTATTAACCCTAAAATTGCTACCTATTGTAATTACCCATTTATCTTCTCATGATGTTCAATTGAAATTTTACAATCCGTGCCATTTTTTTTCTTTTGTCTAGGGAACTACAACGGTCCATCTGAGTATCAGGGAGATGGTTGGGATGGGGGGCGAGGTTTTGGACCTCGAGGTCGAGGACGTGGAAGAGGTCGTGCATTTCGTGGAAGGGGACGTGGTTATGGTCGCCAATCAGGGGGATATTATGATTATGGTGAACCTATGGCACCACCAGTACCGGGTCGGGGTAAGTTATGGAATTTATGATACATTTAAACCCCAAAAGTAAGGGTGCTTGTGAGATAGAAAAAAGAGGCTTAAATTGCAAAAGTAGACACTTTTAGGAAAGAAAATCAGAAGGGTAGGTAGGGGAAGAGAGGGGGGTAAAAGTTGTAGATGATCAAGTTTTGGCTTTCTAACCGCGGTTCTCGTTTTTTTCGCCCCCCTCCCCATATACTTTCATATGCAAATTTTTTATCTTTTGATAGGGTTGCTCTATGGTCCATCTTTTTCTGCTGTTTATGTTATACTCTTTCATTTGTCAATGAAATTGTTTTTCATAAAAAAAAAAGAGATTAAAATGAAGTGTTACTTGATTTTCATGTCAATGCTGTAATTCAAAAGCTTAATGCCGTTGTTTCAAACCTCAAACCTGCACACGCTATTCGTTTATTTCCGTTGTTAGGATTGGATCTGTTGGCTGTTGAAGTGCACATTCTGTTGACTATATATTATCTGAAGGTTTTGCAGGGCGTGGTCGTGGCAGGGGGCGGGCACGTGGTCGTGGTGGTTATTATCGATCCGATGGTCCAGTGCAAGCAGCTGCTGCTTGAGAGGCAAACGTGATCAACGTGGTTGCTGGTTGCATTTTGCCAATGGCCTCGATATCGATATTTTATAGTTCTGTCTTCTACTTTTTTTTGTTTGTTTTCTTTTCAAGTTCGTAAATTGCTGCCATGGAGGTAGGAGTTAATAGTTTCTGTAGTTTTGTCGAGATAGGAAGATTTTCATAGTTCCAAATTAACTTCTCAAGTACATCCGAGGCAAATGGCTGTAAATTATTATTATTATTATTTTTTCATATTCTCTATTCAATAGGAGAGAGTGGTAGTGTAGCAGCAGCAGCAGCAGTACATTCTTTCATTCTTAAGTGAATTTGCATGCTCTAATCTTATCTATCTTTTTTCTTCATTCTTTTTTGGAATACTTTCATTTTCTTTTATATATATACACACATTTATATTATAT

mRNA sequence

ATGGATAGGTACCAGAGAGTGGAAAAGCCCAAGTCAGAGAATACTCCTATAAACGAGAATGAGATTCGCATTACTACTCAAGGAAGGATGAGAAATTACATTACTTATGCCACCACTCTTCTTCAGGAGAAAGGGTCAAACGAGATTGTTGTCAAGGGAATGGGCAGAGCTATTAATAAGACTGTTATGATAGCTGAGTTAATTAAGAGAAGGATTGTTGGTCTCCATCAGAACACAGCAATTGGATCCACGGATATAACTGACATGTGGGAGCCACTTGAAGAAGGCCTTCTTCCTCTCGAGACTACAAGACATGTTTCAATGGTGTCAATAACCTTGTCCAAGAAGGAGCTAGATACATCTTCTACAGGATACCAATCACCTCTTCCCGTTGACCAAGTGAAACCATGGAATGAATTTGAAGATGAAGGAGATGGATCACCTAGAATACGAGGTAGGGGACGTGGTAGAGGAAGAGGCAGGGGTAGAGGGAACTACAACGGTCCATCTGAGTATCAGGGAGATGGTTGGGATGGGGGGCGAGGTTTTGGACCTCGAGGTCGAGGACGTGGAAGAGGTCGTGCATTTCGTGGAAGGGGACGTGGTTATGGTCGCCAATCAGGGGGATATTATGATTATGGTGAACCTATGGCACCACCAGTACCGGGTCGGGGTTTTGCAGGGCGTGGTCGTGGCAGGGGGCGGGCACGTGGTCGTGGTGGTTATTATCGATCCGATGGTCCAGTGCAAGCAGCTGCTGCTTGA

Coding sequence (CDS)

ATGGATAGGTACCAGAGAGTGGAAAAGCCCAAGTCAGAGAATACTCCTATAAACGAGAATGAGATTCGCATTACTACTCAAGGAAGGATGAGAAATTACATTACTTATGCCACCACTCTTCTTCAGGAGAAAGGGTCAAACGAGATTGTTGTCAAGGGAATGGGCAGAGCTATTAATAAGACTGTTATGATAGCTGAGTTAATTAAGAGAAGGATTGTTGGTCTCCATCAGAACACAGCAATTGGATCCACGGATATAACTGACATGTGGGAGCCACTTGAAGAAGGCCTTCTTCCTCTCGAGACTACAAGACATGTTTCAATGGTGTCAATAACCTTGTCCAAGAAGGAGCTAGATACATCTTCTACAGGATACCAATCACCTCTTCCCGTTGACCAAGTGAAACCATGGAATGAATTTGAAGATGAAGGAGATGGATCACCTAGAATACGAGGTAGGGGACGTGGTAGAGGAAGAGGCAGGGGTAGAGGGAACTACAACGGTCCATCTGAGTATCAGGGAGATGGTTGGGATGGGGGGCGAGGTTTTGGACCTCGAGGTCGAGGACGTGGAAGAGGTCGTGCATTTCGTGGAAGGGGACGTGGTTATGGTCGCCAATCAGGGGGATATTATGATTATGGTGAACCTATGGCACCACCAGTACCGGGTCGGGGTTTTGCAGGGCGTGGTCGTGGCAGGGGGCGGGCACGTGGTCGTGGTGGTTATTATCGATCCGATGGTCCAGTGCAAGCAGCTGCTGCTTGA

Protein sequence

MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDTSSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRGGYYRSDGPVQAAAA*

Homology

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BLAST of CsaV3_6G042050 vs. NCBI nr
Match: XP_004141978.1 (ribonuclease P protein subunit p25-like protein isoform X1 [Cucumis sativus] >KGN48399.1 hypothetical protein Csa_003595 [Cucumis sativus])

HSP 1 Score: 494.2 bits (1271), Expect = 6.8e-136
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK
Sbjct: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT
Sbjct: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120

Query: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180
           SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG
Sbjct: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180

Query: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG 240
           RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG
Sbjct: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG 240

Query: 241 GYYRSDGPVQAAAA 255
           GYYRSDGPVQAAAA
Sbjct: 241 GYYRSDGPVQAAAA 254

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BLAST of CsaV3_6G042050 vs. NCBI nr
Match: XP_008440994.1 (PREDICTED: ribonuclease P protein subunit p25-like protein isoform X1 [Cucumis melo])

HSP 1 Score: 493.4 bits (1269), Expect = 1.2e-135
Identity = 253/254 (99.61%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATT+LQEKGSNEIVVKGMGRAINK
Sbjct: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTILQEKGSNEIVVKGMGRAINK 60

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT
Sbjct: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120

Query: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180
           SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG
Sbjct: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180

Query: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG 240
           RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG
Sbjct: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG 240

Query: 241 GYYRSDGPVQAAAA 255
           GYYRSDGPVQAAAA
Sbjct: 241 GYYRSDGPVQAAAA 254

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BLAST of CsaV3_6G042050 vs. NCBI nr
Match: XP_038881759.1 (ribonuclease P protein subunit p25-like protein isoform X1 [Benincasa hispida])

HSP 1 Score: 489.6 bits (1259), Expect = 1.7e-134
Identity = 251/254 (98.82%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK
Sbjct: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           TVMIAELIKRRIVGLHQNT+IGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT
Sbjct: 61  TVMIAELIKRRIVGLHQNTSIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120

Query: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180
           SSTGYQ PLPVDQVKPWNEFEDEG+GSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG
Sbjct: 121 SSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180

Query: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG 240
           RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG
Sbjct: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG 240

Query: 241 GYYRSDGPVQAAAA 255
           GYYRSDGPVQAAAA
Sbjct: 241 GYYRSDGPVQAAAA 254

[Close]

BLAST of CsaV3_6G042050 vs. NCBI nr
Match: XP_031744070.1 (ribonuclease P protein subunit p25-like protein isoform X2 [Cucumis sativus])

HSP 1 Score: 483.0 bits (1242), Expect = 1.6e-132
Identity = 251/254 (98.82%), Postives = 251/254 (98.82%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK
Sbjct: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT
Sbjct: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120

Query: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180
           SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG
Sbjct: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180

Query: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG 240
           RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGR   GRGRGRGRARGRG
Sbjct: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGR---GRGRGRGRARGRG 240

Query: 241 GYYRSDGPVQAAAA 255
           GYYRSDGPVQAAAA
Sbjct: 241 GYYRSDGPVQAAAA 251

[Close]

BLAST of CsaV3_6G042050 vs. NCBI nr
Match: XP_022132370.1 (ribonuclease P protein subunit p25-like protein isoform X1 [Momordica charantia])

HSP 1 Score: 481.5 bits (1238), Expect = 4.5e-132
Identity = 250/255 (98.04%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK
Sbjct: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           TVMIAELIKRRI GLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT
Sbjct: 61  TVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120

Query: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180
           SSTGYQ PLPVDQVKPWNEFEDEG+GSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG
Sbjct: 121 SSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180

Query: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGF-AGRGRGRGRARGR 240
           RGFG RGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGF AGRGRGRGRARGR
Sbjct: 181 RGFGARGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGR 240

Query: 241 GGYYRSDGPVQAAAA 255
           GGYYRSDGPVQAAAA
Sbjct: 241 GGYYRSDGPVQAAAA 255

[Close]

BLAST of CsaV3_6G042050 vs. ExPASy Swiss-Prot
Match: Q99JH1 (Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp25l PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.9e-14
Identity = 51/136 (37.50%), Postives = 70/136 (51.47%), Query Frame = 0


Query: 1   MDRYQR---VEKPKSE---NTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGM 60
           M++Y+R   VE P S      P +  E+R+    ++RN +  A   L+   +  +V  G 
Sbjct: 1   MEQYRRAGSVELPASSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSTRHVVFSGS 60

Query: 61  GRAINKTVMIAELIKRRIVGLHQNTAIGSTDITDMWEPL--EEGLLPLETTRHVSMVSIT 120
           GRA  K V  AE++KRR+ GLHQ T +      D W P   + GL PL   RHV  V + 
Sbjct: 61  GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVL 120

Query: 121 LSKKELDTSSTGYQSP 129
           LS+  LD S  GYQ P
Sbjct: 121 LSRDPLDPSECGYQPP 136

[Close]

BLAST of CsaV3_6G042050 vs. ExPASy Swiss-Prot
Match: Q8N5L8 (Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25L PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.8e-13
Identity = 43/115 (37.39%), Postives = 60/115 (52.17%), Query Frame = 0


Query: 16  PINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIVGL 75
           P +  E+R+    ++RN +  A   L+   +  +V  G GRA  K V  AE++KRR+ GL
Sbjct: 22  PPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGL 81

Query: 76  HQNTAIGSTDITDMWEPL--EEGLLPLETTRHVSMVSITLSKKELDTSSTGYQSP 129
           HQ T +      D W P   + GL PL   RHV  V + LS+  LD +  GYQ P
Sbjct: 82  HQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPP 136

[Close]

BLAST of CsaV3_6G042050 vs. ExPASy Swiss-Prot
Match: Q91WE3 (Ribonuclease P protein subunit p25 OS=Mus musculus OX=10090 GN=Rpp25 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12
Identity = 40/117 (34.19%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 22  IRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIVGLHQNTAI 81
           +R+    ++RN + +AT  + +  +  IV  G GRA  KTV  AE++KRR+ GLHQ T +
Sbjct: 38  MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97

Query: 82  GSTDITDMWEPLEEGLLP----------LETTRHVSMVSITLSKKELDTSSTGYQSP 129
               + ++W+ L  G  P          L   ++V  ++I LSK  LD    GYQ P
Sbjct: 98  RYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDPRQLGYQPP 154

[Close]

BLAST of CsaV3_6G042050 vs. ExPASy Swiss-Prot
Match: Q5PPN2 (Ribonuclease P protein subunit p25 OS=Rattus norvegicus OX=10116 GN=Rpp25 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12
Identity = 40/117 (34.19%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 22  IRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIVGLHQNTAI 81
           +R+    ++RN + +AT  + +  +  IV  G GRA  KTV  AE++KRR+ GLHQ T +
Sbjct: 38  MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97

Query: 82  GSTDITDMWEPLEEGLLP----------LETTRHVSMVSITLSKKELDTSSTGYQSP 129
               + ++W+ L  G  P          L   ++V  ++I LSK  LD    GYQ P
Sbjct: 98  RYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDPRQLGYQPP 154

[Close]

BLAST of CsaV3_6G042050 vs. ExPASy Swiss-Prot
Match: Q9BUL9 (Ribonuclease P protein subunit p25 OS=Homo sapiens OX=9606 GN=RPP25 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.3e-12
Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = 0


Query: 22  IRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIVGLHQNTAI 81
           +R+    ++RN + +AT  + +  +  IV  G GRA  KTV  AE++KRR+ GLHQ T +
Sbjct: 38  MRVKEGSKIRNLMAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97

Query: 82  GSTDITDMWEPLEEG----------LLPLETTRHVSMVSITLSKKELDTSSTGYQSPLP 131
               + ++W+ L  G             L   ++V  ++I LSK  LD    GYQ P P
Sbjct: 98  RYRSVREVWQSLPPGPTQGQTPGEPAASLSVLKNVPGLAILLSKDALDPRQPGYQPPNP 156

[Close]

BLAST of CsaV3_6G042050 vs. ExPASy TrEMBL
Match: A0A0A0KHW5 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486720 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.3e-136
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK
Sbjct: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT
Sbjct: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120

Query: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180
           SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG
Sbjct: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180

Query: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG 240
           RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG
Sbjct: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG 240

Query: 241 GYYRSDGPVQAAAA 255
           GYYRSDGPVQAAAA
Sbjct: 241 GYYRSDGPVQAAAA 254

[Close]

BLAST of CsaV3_6G042050 vs. ExPASy TrEMBL
Match: A0A1S3B323 (ribonuclease P protein subunit p25-like protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485240 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.6e-136
Identity = 253/254 (99.61%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATT+LQEKGSNEIVVKGMGRAINK
Sbjct: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTILQEKGSNEIVVKGMGRAINK 60

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT
Sbjct: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120

Query: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180
           SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG
Sbjct: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180

Query: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG 240
           RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG
Sbjct: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGRG 240

Query: 241 GYYRSDGPVQAAAA 255
           GYYRSDGPVQAAAA
Sbjct: 241 GYYRSDGPVQAAAA 254

[Close]

BLAST of CsaV3_6G042050 vs. ExPASy TrEMBL
Match: A0A6J1BSA2 (ribonuclease P protein subunit p25-like protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005246 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132
Identity = 250/255 (98.04%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK
Sbjct: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           TVMIAELIKRRI GLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT
Sbjct: 61  TVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120

Query: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180
           SSTGYQ PLPVDQVKPWNEFEDEG+GSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG
Sbjct: 121 SSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180

Query: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGF-AGRGRGRGRARGR 240
           RGFG RGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGF AGRGRGRGRARGR
Sbjct: 181 RGFGARGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGR 240

Query: 241 GGYYRSDGPVQAAAA 255
           GGYYRSDGPVQAAAA
Sbjct: 241 GGYYRSDGPVQAAAA 255

[Close]

BLAST of CsaV3_6G042050 vs. ExPASy TrEMBL
Match: A0A6J1KS41 (uncharacterized protein LOC111496756 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496756 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.7e-130
Identity = 247/255 (96.86%), Postives = 248/255 (97.25%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK
Sbjct: 114 MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 173

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           TVMIAELIKRRI GLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT
Sbjct: 174 TVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 233

Query: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180
           SSTGYQSPLPVDQVKPWNEFEDEG+GSPRIRGRGRGRGRGRGRGNYNG SEYQGDGWDGG
Sbjct: 234 SSTGYQSPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGTSEYQGDGWDGG 293

Query: 181 RGFGPR-GRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGR 240
           RGFGPR GRGRGRG AFRGRGRGYGRQSGGYYDYGEPM P VPGRGF GRGRGRGRARGR
Sbjct: 294 RGFGPRGGRGRGRGLAFRGRGRGYGRQSGGYYDYGEPMTPTVPGRGFVGRGRGRGRARGR 353

Query: 241 GGYYRSDGPVQAAAA 255
           GGYYRSDGPVQAAAA
Sbjct: 354 GGYYRSDGPVQAAAA 368

[Close]

BLAST of CsaV3_6G042050 vs. ExPASy TrEMBL
Match: A0A6J1HDX9 (ribonuclease P protein subunit p25-like protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463304 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 6.6e-129
Identity = 244/255 (95.69%), Postives = 247/255 (96.86%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK
Sbjct: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           TVMIAELIKRRI GLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT
Sbjct: 61  TVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120

Query: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180
           SSTGYQ+PLPVDQVKPWNEFEDEG+GSPRIRGRGRGRGRGRGRGNYNG SEYQGDGWDGG
Sbjct: 121 SSTGYQAPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGTSEYQGDGWDGG 180

Query: 181 RGFGPR-GRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAGRGRGRGRARGR 240
           RGFGPR GRGRGRG AFRGRGRGYGRQSGGYYDYGEP+ P VPGRGF GRGRGRGRARGR
Sbjct: 181 RGFGPRGGRGRGRGLAFRGRGRGYGRQSGGYYDYGEPITPTVPGRGFVGRGRGRGRARGR 240

Query: 241 GGYYRSDGPVQAAAA 255
           GGYYR DGPVQAAAA
Sbjct: 241 GGYYRPDGPVQAAAA 255

[Close]

BLAST of CsaV3_6G042050 vs. TAIR 10
Match: AT1G76010.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 252.3 bits (643), Expect = 4.2e-67
Identity = 160/262 (61.07%), Postives = 185/262 (70.61%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MD+YQRV KPK++ TPI+ NEIRIT+QGR RNYITYA TLLQ+KGS E+V K MGRAINK
Sbjct: 1   MDKYQRVVKPKAD-TPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINK 60

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           TV I ELIKRRI  LHQNT+IGSTDITD WEP EEGLLPLETTRHVSM++ITLSK EL+T
Sbjct: 61  TVTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLETTRHVSMITITLSKIELNT 120

Query: 121 SSTGYQSPLPVDQVKPWNEFEDEG-DGSPRIRGRGRGRGRGR-----GRGNYNGPSEYQG 180
           SS GYQ P+P++ VKP  + + EG +GSP  RGRGRGRGRGR     GRGN     E++ 
Sbjct: 121 SSVGYQCPIPIELVKPMGDIDYEGREGSPGGRGRGRGRGRGRGRGRGGRGNAYVNVEHED 180

Query: 181 DGWDGGRGFGPRGRGRGRGRAFRGRGRG--------YGRQSGGYYDYGEPMAPPVPGRGF 240
            GW+  + +G RGRGRGRGR+ RGRGRG        Y     G Y Y  P       RG+
Sbjct: 181 GGWEREQSYG-RGRGRGRGRSSRGRGRGGYNGPPNEYDAPQDGGYGYDAPH----EHRGY 240

Query: 241 AGRGRGRGRARGRGGYYRSDGP 249
             RG      +GRGGY   DGP
Sbjct: 241 DDRGGYDAPPQGRGGY---DGP 253

[Close]

BLAST of CsaV3_6G042050 vs. TAIR 10
Match: AT1G20220.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-62
Identity = 160/256 (62.50%), Postives = 181/256 (70.70%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MD+YQRVEKPK++ TPI ENEIRIT+ GR RNYITYA  LLQE  SNE++ K MGRAINK
Sbjct: 1   MDKYQRVEKPKAD-TPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINK 60

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           +V I ELIKRRI GLHQ T+IGSTDITD WEP EEGL  +ETTRHVSM++ITLSK++L+T
Sbjct: 61  SVTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGLQTIETTRHVSMITITLSKEQLNT 120

Query: 121 SSTGYQSPLPVDQVKPWNEFEDEG-DGSPRIRG--RGR-GRGRGRGRGNY-NGPSEYQGD 180
           SS GYQ P+P++ VKP  E + EG DGSPR RG  RGR GRGRGRGRG   NGP+  + D
Sbjct: 121 SSVGYQCPIPIEMVKPLAEIDYEGQDGSPRGRGGRRGRGGRGRGRGRGGRGNGPANVEYD 180

Query: 181 GWDGGRGFGPRGRG--------RGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFA 240
             DGGRG G RG G         GRGR   GRG GY       Y+ G        GRG  
Sbjct: 181 --DGGRGRGGRGNGYVNNEYDDGGRGRG--GRGSGYVNNE---YNDGGMEQDRSYGRG-R 240

Query: 241 GRGRGRGR-ARGRGGY 243
           GRGRG GR  RGRGGY
Sbjct: 241 GRGRGGGRGGRGRGGY 247

[Close]

BLAST of CsaV3_6G042050 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.3e-39
Identity = 135/347 (38.90%), Postives = 165/347 (47.55%), Query Frame = 0


Query: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60
           MDRYQRV KPK E +PINENEIRIT++G +RNYI+YAT+LLQEK   +IV+K MG+AI+K
Sbjct: 1   MDRYQRVAKPKPE-SPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISK 60

Query: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120
           TV I+E++K +I GLHQ+ AI S  ITD+WEP EEGL P+E TRHVSM+SITLS  EL+ 
Sbjct: 61  TVAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLSELNK 120

Query: 121 SSTGYQSPLPVDQVK-------------PWNEFEDEGD---------------------- 180
            S GYQ+P   DQ K             P+N + +EG+                      
Sbjct: 121 DSPGYQAPAQSDQSKPQYQPQQGRQARLPYNAYGEEGEVVAEGEAGEEVDMETTKGVMKE 180

Query: 181 ----------------------------------------GSPRIRGRGRGRGRGRGRGN 240
                                                   G  R  G G GR  G G   
Sbjct: 181 KTKGTIKKIIKTMKVGIQTRAEAVDVVDEAMAIVGGRGGYGGGRDGGYGGGRDDGYGERR 240

Query: 241 YNGPSEYQGDGWDGGR------------------GFGPR------GRGRGRGRAFRGRGR 248
            +G  E + D + GGR                  G+G R      GRG GR   + G   
Sbjct: 241 NDGYGERRNDRYGGGRDDGYGGGRDDGYGGGRNDGYGGRRGGFRGGRGGGRDEGYGGGRG 300

[Close]

BLAST of CsaV3_6G042050 vs. TAIR 10
Match: AT1G31290.1 (ARGONAUTE 3 )

HSP 1 Score: 46.2 bits (108), Expect = 4.5e-05
Identity = 50/109 (45.87%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 152 GRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGPRGRGRG------RGRAFRGRGRGYGR 211
           GRGRG G  RGRG Y+G  + +G G DG RG+  RG G G      RGR + GRG G GR
Sbjct: 13  GRGRGGGGDRGRG-YSGRGDGRGRGGDGDRGYSGRGDGHGRGGGGDRGRGYSGRGDGRGR 72

Query: 212 QSGGYYDYGEPMAPPVPGRGFAGRGRGRGRA----RGRGGYYRSDGPVQ 251
             GG             GRG++GRG G GR     RGRG   R  G VQ
Sbjct: 73  GGGG-----------DRGRGYSGRGDGHGRGGGGDRGRGYSGRGRGFVQ 109

The following BLAST results are available for this feature:

BLAST of CsaV3_6G042050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141978.1	6.8e-136	100.00	ribonuclease P protein subunit p25-like protein isoform X1 [Cucumis sativus] >KG...	[more]
XP_008440994.1	1.2e-135	99.61	PREDICTED: ribonuclease P protein subunit p25-like protein isoform X1 [Cucumis m...	[more]
XP_038881759.1	1.7e-134	98.82	ribonuclease P protein subunit p25-like protein isoform X1 [Benincasa hispida]	[more]
XP_031744070.1	1.6e-132	98.82	ribonuclease P protein subunit p25-like protein isoform X2 [Cucumis sativus]	[more]
XP_022132370.1	4.5e-132	98.04	ribonuclease P protein subunit p25-like protein isoform X1 [Momordica charantia]	[more]

BLAST of CsaV3_6G042050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99JH1	8.9e-14	37.50	Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp2...	[more]
Q8N5L8	9.8e-13	37.39	Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25...	[more]
Q91WE3	2.9e-12	34.19	Ribonuclease P protein subunit p25 OS=Mus musculus OX=10090 GN=Rpp25 PE=2 SV=1	[more]
Q5PPN2	2.9e-12	34.19	Ribonuclease P protein subunit p25 OS=Rattus norvegicus OX=10116 GN=Rpp25 PE=2 S...	[more]
Q9BUL9	8.3e-12	33.61	Ribonuclease P protein subunit p25 OS=Homo sapiens OX=9606 GN=RPP25 PE=1 SV=1	[more]

BLAST of CsaV3_6G042050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHW5	3.3e-136	100.00	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486720 PE=4 S...	[more]
A0A1S3B323	5.6e-136	99.61	ribonuclease P protein subunit p25-like protein isoform X1 OS=Cucumis melo OX=36...	[more]
A0A6J1BSA2	2.2e-132	98.04	ribonuclease P protein subunit p25-like protein isoform X1 OS=Momordica charanti...	[more]
A0A6J1KS41	2.7e-130	96.86	uncharacterized protein LOC111496756 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HDX9	6.6e-129	95.69	ribonuclease P protein subunit p25-like protein isoform X1 OS=Cucurbita moschata...	[more]

BLAST of CsaV3_6G042050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76010.1	4.2e-67	61.07	Alba DNA/RNA-binding protein	[more]
AT1G20220.1	1.4e-62	62.50	Alba DNA/RNA-binding protein	[more]
AT3G07030.1	1.3e-39	38.90	Alba DNA/RNA-binding protein	[more]
AT1G31290.1	4.5e-05	45.87	ARGONAUTE 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 15..119 e-value: 2.8E-35 score: 122.2
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 17..130
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 20..84 e-value: 1.3E-18 score: 66.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..152
None	No IPR available	PANTHER	PTHR13516:SF16	RIBONUCLEASE P PROTEIN SUBUNIT P25-LIKE PROTEIN	coord: 1..248
None	No IPR available	PANTHER	PTHR13516	RIBONUCLEASE P SUBUNIT P25	coord: 1..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G042050.1	CsaV3_6G042050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding