CsaV3_6G041990 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G041990
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 24544668 .. 24544894 (-)
RNA-Seq ExpressionCsaV3_6G041990
SyntenyCsaV3_6G041990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATGGGCAGCACAGAAGCAAGTCAAGCAGACGAAAGCAGACGGCAAAGTAGACACACGGCGGTCAAAATACGCAACCAAACTCTTCGGAAAAGTACTTTTTCAAAAATCACTCTCTTTTACTCAATTATTATTATTTTCTTTCGATCTTTATAAAAGCCCCATTTCTCTTCTTCTATCCTTCAATTCAATCTCACCATTTCTTCTTCTTCTTCTTCTTTCTGA

mRNA sequence

ATGGCATGGGCAGCACAGAAGCAAGTCAAGCAGACGAAAGCAGACGGCAAAGTAGACACACGGCGGTCAAAATACGCAACCAAACTCTTCGGAAAACCCCATTTCTCTTCTTCTATCCTTCAATTCAATCTCACCATTTCTTCTTCTTCTTCTTCTTTCTGA

Coding sequence (CDS)

ATGGCATGGGCAGCACAGAAGCAAGTCAAGCAGACGAAAGCAGACGGCAAAGTAGACACACGGCGGTCAAAATACGCAACCAAACTCTTCGGAAAACCCCATTTCTCTTCTTCTATCCTTCAATTCAATCTCACCATTTCTTCTTCTTCTTCTTCTTTCTGA

Protein sequence

MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF*
Homology
[Close]
BLAST of CsaV3_6G041990 vs. NCBI nr
Match: KGN48393.1 (hypothetical protein Csa_004068 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0 

Query: 1  MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF 54
          MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF
Sbjct: 1  MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF 53

[Close]
BLAST of CsaV3_6G041990 vs. ExPASy TrEMBL
Match: A0A0A0KFT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486170 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.9e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0 

Query: 1  MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF 54
          MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF
Sbjct: 1  MAWAAQKQVKQTKADGKVDTRRSKYATKLFGKPHFSSSILQFNLTISSSSSSF 53

The following BLAST results are available for this feature:
BLAST of CsaV3_6G041990 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48393.11.2e-18100.00hypothetical protein Csa_004068 [Cucumis sativus][more]
BLAST of CsaV3_6G041990 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G041990 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFT45.9e-19100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486170 PE=4 SV=1[more]
BLAST of CsaV3_6G041990 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G041990.1CsaV3_6G041990.1mRNA