CsaV3_6G041940 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G041940
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionTransmembrane protein
Locationchr6: 24482818 .. 24490287 (+)
RNA-Seq ExpressionCsaV3_6G041940
SyntenyCsaV3_6G041940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGAAATAATTTTACCCACTGGGAATTTCGATCTCCAAACTCTATTCTTACGAAAAAAAATTAAATGAGAAAGGTAAAATTAGTTAAAATTTGTCGGGAAAAGAAAAATCTCAACTTACCCAAATATCCTTCACAGATTCGTCGGATCCAACCCTTTCTTGTTTCTCACTTCTCACTTCCCACTTCCCACTTCACATCCTTTTTTTTTTTTTACTCCAAACCAAACCTTCTTCATCAATGGCGGATATTGACACCCAGATTCGGCAACACCCATCAATCTCCAAGGAAACAGCTCTCCAAGCTCTCAACACCATTATCCAACTCCATTTCGAGAAGACCCTCGAGAAGAAACGCGCCATAGATCTCCAAAAGAAAGAGCTTCACAAGCTTTTCCAGCTCTTCTTCATATTCCTCGCTCTCATTTTCTTGACCCAATCTCTTTCCCCTCGCCTCGAATGCCGCCATTGCTGGATCCCCATTGCTCTTCTCTCCGTTTCCCATCTCAGTTTCTACGTCTCTGTCGCTCAGACCCTCCGTTGCATCAATGGCTTCAAGTACCAGCGCCGTTGCCATAAGCTTACTCTGGGTTTCGCTACTGAACGCCTCAGAGAGATGAGGATGAAGATTTCCGCCGCCGTCGATGCAGGGTTTGATGGAGGCGTGACGGATGAGGAATTTGAGATTCATTATCAGGAACCACCCGAGAGTTATTTGGGTAAGTTTAAAAGGAATTGGGCTCTGCATTTTGGGTTCTTGATCTTCATTTATCTCTTCATGATTTCTTCCTCTGTTGTTCTTCTCTGTTCTTGATTCTTTATTATTCTTTTTTTTTTTTTTTTTGTGCAAAATTGGAAAAGAAAATCAGCAATTTTTGGATTGGGATTGTTCATTCTTTGTTGTTTGATTTTACCCCACTTTTAATAGTTGGATTTTCCTTCTTCTTTTTGGCATTTTTATTTTGTTGCTCACTTCACTTATAGCAACTTATAGCTCGTGCTTGGAAGTTGGAATTGTAGTGAAATCAATTCCAATGTAAATAGTTAAAATTTGATTTTTGGGGTATTTAAACTGATTTTGTGTTGATAATATTTTCAGAGAAAGTTTAAATTAGAAATGAAGAATGAGAAGTGTATAGTATGAGTAATTTTATTGGGAAGTCAAATTTTAAAAAAAATGGCTACATTTCTCAAAATATTGGAGAAAGGGTTAGTCAAAATGATGAAGGTTGAAAAAGAATAGTTGATTGAAATTCCAGTGCTCTATGAATTATATATATTATTCTATCATATGATGTTTGTTAATGTGAACTTTATGACTTTGAAGAATGCTTTTCAGAGTAAAGGGGGTGTCATTTCAAATTTTCCTTTTTGGTTAAATTTTCATTTTTAGCTTTTCTCTTTTTATGATTCACCTACAACATTATTCCTCCTCTCCTTTTCTTTTCTTTTTTTTCATTTATTTTTGTTTTAATATTTTATATAGTTTTATAACTTTTATCTCACTTTAATTTAATGTTGATTCATGACTACTAGTAGTATACTATATGCTCTCCTACCTTTGAGTCATACCATTTTATTCTAATAATTTCAATTAATGTCTCTATTGTTCATAAAATTTGAGAGTATCTTCTCCCTGTTGTAATTTTTGGACTAAAGTTTCTATAGAAAAAAACTTTGAATTAATTTTTTTTTGTTTATTTAACCAATAATACGAATGAAACTTCACCAAGTGAGTGAGTTATGCTTAGATATCGACTGTGAAAAAATAGTTTGTTCCGATAATATTACAACACATTTGAATCATAGGCTACCAACATGGTTTGGCACACAATTCAAAATTTCAAGATACAAAACAATACATTTTTTAATTCAATAATACGTATGGAGATAGAGATTTAAATATTTGACTTTTTTTTATTAGCGACGTATATCTTTTATCTTATATTAAAATTAACAACCATTTGTCTAGACTCTAGACGTTGTATTTTAATTAAACTCTTCAAACAACATTCTTATTCAATCTGATCATTAACAAAAGCATATATGATTGGAAGAATTAGTATGAATGAAAATAGTCCAATTCATCTGTTGAATGTGAACACCTTCATTTTTATTAAAAAGAAAAAAAGGAATTTAACTGATTGAGATTTTATGTGGAAATTAAATATGATGGAGTGTGTTGGATGAATTATTATTGTTTTTATTTTCTTGGATGAATTGATTAATAATGAATGATATGATAATGGCGATCCACTATTTTAATTATAAGCTGCCCACAAACTTAGCTTGTATGCCTTTATGAGGCCAACACAAACAAATTATAATAATGATACAGTGAATGTGTTTGTATATAAAAATAGAAATATAATAAATGTGTCCACTTTATATTTGTATCTTTAAAGCCGGCCTTAGATATCATAGATTGCCCAAAGTTTTTTTCCATTTCATTTTAATTTATTGATTCTCCATTTACCTACATTTGCTTCCATTATTCTTCTATTTTCTTAATCATTGTTAAGATCCTTTTTAAATAGAAAAAATAACTATTCAGATGAAAAAAATTAAATTCATTATAAATAAATTCATATGAAGTGCAACAGTTTTACAAATAACCCAAAAATTTATATATCACTTCCACTTTTAAAATTGCAAAAACAACAAATTTAAAAAGATATTATGGTATGTTATCGTTATACTTGTTAAATTTGCAATATGCAAAATAGTGGTGTTATGAGCTGTATTTTTTTAAATCTTTTTTATTATTTAATGTAATTTTCTTAAATATTTTGTCAGGTTTTTATATTTTTTTATAATTTTCTTTATTATTTATTGTGTTTGATCATATTTATTTTTTAAATATGATTGAAAACACTCTTACAAGGAAAAGTAGAGGTTAAAAAATAGAGAAATTGCATTAGATAAATCCTTTTATAAAAAAGCAACTCATAACATTTTTTTTTTTTTTGCATATTGCAAATATAAAAATTATGACAAGTAATTAGATATATTAAACGGCTACCTAAAGACTATCAGACAACTATCAAAGGATTATGCGATGACTATCCACTTTTAAAGTTGCTATTTTTACAATTTAAAAAAATACAGTGACATGATCCTTATTATTATTATTTTGCTATTTTTATAAACACTCCTAAAAAATAACGGTGAAAGAGTTGGAAAACTCATAAATAATAATAAAATTAAAATACTATTTTAATACATGTTGATTTTGACATAAATTACCTTTCAACAAAATTACCTTTCACCATAGATAGAAAAATTATATGATACTATTTATATAATTTGTACCCACAACTCATATTTAAGTTAACTTTCAAATACAACAAAATCAATTAAAATATTTAGATAAATTTATCATAAATAGAAATATAAAATTTATTTAAATCTTTAAAATATTTTAAACAGTTTTACCTTCAAATACAAAAGTTGAAAACATAAATACTAACATAAACACTCCAAAGTTTTTGGTACTCTTAAAGTTGAAAGATAGAAGTATGAAGTTATGTGAAGAAGTTATGAGAGTTAGATGAGATGGTAGAGGATAATGTAAATTAATTTTGTATTTATTCATTTACTTCTTTTGATGAATAAAATTTAGAGCTTGTTGGTAACTGAAAACAAAAGAAAAAAAATATAGGTGTAAAGGAAAATTACGCATCCCAAAATAATTGTGACAAACCCAATTAATTGAATCTTGGATTAGCACAAATAAATGGAAAAAGATTGGTCCAACTAGGGTATGAACTTCATTAATACTCTAAACTCTGTTAGTACAAGAAATTGTGTTGCACAAATCATCAAAATCTTAACTTCATACAACTACACCCAAACATTTTTTGATTGTAAATATGTAAAGCAAAACTTGTTGTATTGTATGTATCTTTTATTTGGACCTAGATCTTGATTTTACTTATAAAAAACGAATAAAGTTAATCATAATTCCGTATTTACATGATATCGTTTTGTGAAAATAAAATTGATTTTTGGTGTGTCCAAATATTTTGTTTTCCCATAAGCCAACCTGTAATATGTAAACATTACAGAACACAACAAAAGCCATTGCTGAAAATGATATAATAATATTCCCAAAACGGATCCCTCTCTTTCTCTCACATTTTATTCCTCTCCCTTGTTCTTGTCACCCAGTACTACTTCTTATTAATAAATAAATAACATTTTTTTTTATTTTTCGAATAAAATAAACAAACAAATTACGACAGGCTGTGAGTATACATTTTTATTTATATTTTTTTGTAGACATTACAATCGTTCTAAGCATAAATAATGTAATGTTGTTGAGTATTTGTTTTGTTTTTATTAATAACTTTTTTTTTTTTAAATTGCAATTTCGTTGTTTGTGACCAATTGTCCCAATCCCAAATTGCCGAAAATCCCTCTTTATAAATTATTAAACCCATCTTCTCTCTGTTTCTCACTTTCGTTCATTCATTCATTCATTCATTCACACACACACACACACAACAGCAACAGCAAAAGAAAAGATGGGAGCTTGTGCCACAAAGCCAAAGGATCTGAAGGCGGAGTCCGGCGACGCTCCGGAGGAGTTGCCGGCCGAAACTAAACCGGATCATGTCGGTGATGAAAAGGCGAAGGAGATCGTCGTTGATGATGACAAGGTGGATTCTAAGCCTCCTTCTCTTACTGATTTGTTCATTCATCAGGTTGTTTTTTTTTAAATAAAAAAAATACTCAATTAATTTAAAATTTTGTTTATTTTTCTTCTTAAAAAAATATTTAAATGGGTATTTCAAAATTTTTTTGAAAAAATTAATGTGGGTGTGATTTAATTATTTGAAGATGTGTGTTTGGATGATGAGAAAATTTGAGGAAAATAAAAATAAAGAAATGTAGATGAATATATTATTGAAAATGTGTAGTGGGTTGTCTTTTTCCTTTCATTTGGTTTGTTTTTTTTCTTTTAAATTATTTTGTTGGACATTTCTGTAGAACAATTAGACACCAAATTTTACTCTCTCTCTCTCTCTCTCTCTGGGGTAAAAGCTGATTAATCATTGACAATAATAGAAAAAGTTGAATTATAAATTTAGTTTTCTTTTTAATTGTGTGTTTATACTCAGTTAACTTTAAAATTAGGATCTGATTGGTTGGGCTTTCTTAGACCCAGAATTTAATTTTTTATACTTAGGCTTGTTACTTTTAACAAGTTTGAACCATCGTTTACATACCTATTAAACATAAAATTCAGAAGAAAAAAAAATCAATTTATACTTCTTTTTAAAAAAATTTAAGTATTGTATGAATTAATACAATCAAATTTTATAATTATATCAATTAAACTCATAAGTATAGATTTATAATTGTATCTTAAAATTATATGTAAAGAGATTATTTTATTTGTACATATGTTTGAAGAAGAGACTTGTTTATGAGAGATTTGATAGAAAAAGTAATTGACTTATACCATGTCCATGTTTATCCAAACGTATATAATCTAATGAAGAGTAAACTAAATTATCAAAAGTGTACAGCTTATAACTTTTATGGATACAATTTGAAAAATGAACACAAAGTAAAAAGAACCAAAAACAAAAACATAAAAACAAATGTAAAATGGATTACCAAAAACAAACATAACTCAATACACCTACAATTTATAGTATCGACGTTTGAAGGTTAAGAGGTAAAAGTAAATTGTGAAGAAAAGGTTAAAAGAAAGGGGTGTGGAATGGGTTTGGAGTGTTATGAGCAGGAGCAGTGGCAGTAGATGGGGTTGTGGTGGAAGGGCAAAAAGAAAAAAGAAAAAAAGAGAGAGAGAGAGAGATTCCATAATTTTGTTTTGTTTTCGATTGTTGCTTTCTATAATTTGGTTTCCTGGTTGTCACCTAATTAAATAAATGCTGGCCTCCTGTTTTTCTTTTTCATCAAACTCCTTTGTCTATTGGGATCTAAATTACATACAGAAAAGCTGCCTTTTACTTTTAGTACATAGTTTTTTTTATTTAGTTTCATGGATTTGGTCCTTCGTATTGATGTTTATTATTAAATTTAAGTTAAATTCTAAACACTTTCATTCAATTTTCATCACTAGTAAATTATATTTTAATTTTTTATTCATAATTATTTTTTTTTAAAAAAAAATTAACACCAAGGACAAAAGTGAGTTTGGACTCAGTAGCCCAATAGCCTTCACTGTTGTTTGGACTCAAGTTGGGCCAGCCCAACATATTCTCTTCCTCACTCTTTAAACTTTGGATAGCTGCAAATTTAACCAAAATAATATTTTAAATTCCGTCGATAGAAGTCTATCATCAATGGTCAATGATTACCCTAAAACTTTTGTTATAGATGAGATATAATTGTAAATATAGTCATTAAATTAAAAATAATTAAGTATATAACAATATTTAAAAAAAAATTATAAATACAACAAAATTTATTAAAGTTTATCATTAATAGATTATGTTGCAAATATTTATTAATAGGCTATAAGAGTCTTTCAACGTAAAAGTCTATCACAAATAAATTTTACTAAATTTTTAAATTTTAAAAATGTTGTTATATGATTAATTATTATTATTATAATTACCCATTACAAATCGATTAATTTGGTTGTTTGATTTGTTGCGTGGAATATTGAAGATCATGAATGAAGATTATATCAATTAAAATAATTTATATAATAAGTTTTTTTATTGATGTGAACTATGAAATTCAATCTACGAACGATATTGAAATGTGTCTTTTAGTCTCTATCTAATTTTAACAAGTCGTTGCTAGATCAATTTTAAAATTCAAAAGTAAAAAATTTGTAAAAAGTTCACAAATCATTTCCCAGTAGTTATCAAAACTAATATTTCAAACAAAAAAAATAAATACTCTATAAACATAAATAGTAAATAACTAAAAAAAAAACCATAAGGATGGTTGATTTTTAAAATGATTTTGAAGTTTGAAAAATGCTTTTAGATAGTTTCTCAGTTAATTTTACCATTAGTGATTCAATTGGCATAAACTTATATCCCAGAACTCATGGATGATAGAAATAGTAGTTATAGTATACAATGTCGTCTTTATTTTTATTTTTTTCTTTTCACAAGATAATATACATTCTAATTATTTGAATAATATTTGAATTTAAGAAGTTGGATGTCGTTAATGTGAATTCATGCAGAAGGAAGGTAATAAGGAGAAGACTGAAGATGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAAACCCACTACCGGAGGAGAAGCCGTCTGAAAACAACCCACCGGAGCCAGTAGTTTCGGACTCTGTTACAGAAAACAAAACTGTAACAGAAATGGAAACCCCAGATGAGGCAATCAAAGTGGAAGTTACCATTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCAGCGGAGAAACCAACTGAAACAGAGAAGGAAGTGAAGGTAACTAATTAG

mRNA sequence

ATGGCGGATATTGACACCCAGATTCGGCAACACCCATCAATCTCCAAGGAAACAGCTCTCCAAGCTCTCAACACCATTATCCAACTCCATTTCGAGAAGACCCTCGAGAAGAAACGCGCCATAGATCTCCAAAAGAAAGAGCTTCACAAGCTTTTCCAGCTCTTCTTCATATTCCTCGCTCTCATTTTCTTGACCCAATCTCTTTCCCCTCGCCTCGAATGCCGCCATTGCTGGATCCCCATTGCTCTTCTCTCCGTTTCCCATCTCAGTTTCTACGTCTCTGTCGCTCAGACCCTCCGTTGCATCAATGGCTTCAAGTACCAGCGCCGTTGCCATAAGCTTACTCTGGGTTTCGCTACTGAACGCCTCAGAGAGATGAGGATGAAGATTTCCGCCGCCGTCGATGCAGGGTTTGATGGAGGCGTGACGGATGAGGAATTTGAGATTCATTATCAGGAACCACCCGAGAGTTATTTGGCAACAGCAAAAGAAAAGATGGGAGCTTGTGCCACAAAGCCAAAGGATCTGAAGGCGGAGTCCGGCGACGCTCCGGAGGAGTTGCCGGCCGAAACTAAACCGGATCATGTCGGTGATGAAAAGGCGAAGGAGATCGTCGTTGATGATGACAAGAAGGAAGGTAATAAGGAGAAGACTGAAGATGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAAACCCACTACCGGAGGAGAAGCCGTCTGAAAACAACCCACCGGAGCCAGTAGTTTCGGACTCTGTTACAGAAAACAAAACTGTAACAGAAATGGAAACCCCAGATGAGGCAATCAAAGTGGAAGTTACCATTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCAGCGGAGAAACCAACTGAAACAGAGAAGGAAGTGAAGGTAACTAATTAG

Coding sequence (CDS)

ATGGCGGATATTGACACCCAGATTCGGCAACACCCATCAATCTCCAAGGAAACAGCTCTCCAAGCTCTCAACACCATTATCCAACTCCATTTCGAGAAGACCCTCGAGAAGAAACGCGCCATAGATCTCCAAAAGAAAGAGCTTCACAAGCTTTTCCAGCTCTTCTTCATATTCCTCGCTCTCATTTTCTTGACCCAATCTCTTTCCCCTCGCCTCGAATGCCGCCATTGCTGGATCCCCATTGCTCTTCTCTCCGTTTCCCATCTCAGTTTCTACGTCTCTGTCGCTCAGACCCTCCGTTGCATCAATGGCTTCAAGTACCAGCGCCGTTGCCATAAGCTTACTCTGGGTTTCGCTACTGAACGCCTCAGAGAGATGAGGATGAAGATTTCCGCCGCCGTCGATGCAGGGTTTGATGGAGGCGTGACGGATGAGGAATTTGAGATTCATTATCAGGAACCACCCGAGAGTTATTTGGCAACAGCAAAAGAAAAGATGGGAGCTTGTGCCACAAAGCCAAAGGATCTGAAGGCGGAGTCCGGCGACGCTCCGGAGGAGTTGCCGGCCGAAACTAAACCGGATCATGTCGGTGATGAAAAGGCGAAGGAGATCGTCGTTGATGATGACAAGAAGGAAGGTAATAAGGAGAAGACTGAAGATGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAAACCCACTACCGGAGGAGAAGCCGTCTGAAAACAACCCACCGGAGCCAGTAGTTTCGGACTCTGTTACAGAAAACAAAACTGTAACAGAAATGGAAACCCCAGATGAGGCAATCAAAGTGGAAGTTACCATTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCAGCGGAGAAACCAACTGAAACAGAGAAGGAAGTGAAGGTAACTAATTAG

Protein sequence

MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLALIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFATERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLATAKEKMGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN*
Homology
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BLAST of CsaV3_6G041940 vs. NCBI nr
Match: KAE8647470.1 (hypothetical protein Csa_004096 [Cucumis sativus])

HSP 1 Score: 582.0 bits (1499), Expect = 3.0e-162
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0 

Query: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60
           MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA
Sbjct: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60

Query: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120
           LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT
Sbjct: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120

Query: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLATAKEKMGACATKPKDLKAES 180
           ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLATAKEKMGACATKPKDLKAES
Sbjct: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLATAKEKMGACATKPKDLKAES 180

Query: 181 GDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINP 240
           GDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINP
Sbjct: 181 GDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINP 240

Query: 241 LPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTET 300
           LPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTET
Sbjct: 241 LPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTET 300

Query: 301 EKEVKVTN 309
           EKEVKVTN
Sbjct: 301 EKEVKVTN 308

[Close]
BLAST of CsaV3_6G041940 vs. NCBI nr
Match: XP_011657774.1 (uncharacterized protein LOC101206076 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 1.8e-82
Identity = 160/163 (98.16%), Postives = 160/163 (98.16%), Query Frame = 0 

Query: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60
           MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA
Sbjct: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60

Query: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120
           LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT
Sbjct: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120

Query: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLATAK 164
           ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYL   K
Sbjct: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLGKFK 163

[Close]
BLAST of CsaV3_6G041940 vs. NCBI nr
Match: XP_008441005.1 (PREDICTED: uncharacterized protein LOC103485248 [Cucumis melo])

HSP 1 Score: 312.8 bits (800), Expect = 3.4e-81
Identity = 157/163 (96.32%), Postives = 159/163 (97.55%), Query Frame = 0 

Query: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60
           MADI+TQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA
Sbjct: 1   MADIETQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60

Query: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120
           LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT
Sbjct: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120

Query: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLATAK 164
           ERLREM+MKISAAVD GFDGGVTDEEFEIHYQEPPESYL   K
Sbjct: 121 ERLREMKMKISAAVDGGFDGGVTDEEFEIHYQEPPESYLGKFK 163

[Close]
BLAST of CsaV3_6G041940 vs. NCBI nr
Match: XP_038883211.1 (uncharacterized protein LOC120074230 [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 8.1e-75
Identity = 147/165 (89.09%), Postives = 154/165 (93.33%), Query Frame = 0 

Query: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60
           MAD++TQ RQHPSISK+TALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFL 
Sbjct: 1   MADMETQSRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLG 60

Query: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120
           LIFL QSLSPRLECRHCWIPIALLS+SHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT
Sbjct: 61  LIFLAQSLSPRLECRHCWIPIALLSISHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120

Query: 121 ERLREMRMKISAAVDA--GFDGGVTDEEFEIHYQEPPESYLATAK 164
           ERLRE++MKISAA  A  GFDGG+ DEEFEIHYQEPPESYL   K
Sbjct: 121 ERLREIKMKISAAAAAGGGFDGGLVDEEFEIHYQEPPESYLGKFK 165

[Close]
BLAST of CsaV3_6G041940 vs. NCBI nr
Match: XP_022949634.1 (uncharacterized protein LOC111452966 [Cucurbita moschata] >XP_023543401.1 uncharacterized protein LOC111803295 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.3 bits (669), Expect = 5.2e-66
Identity = 131/163 (80.37%), Postives = 141/163 (86.50%), Query Frame = 0 

Query: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60
           MAD++   R HPSIS ETALQALNT+IQLHFEKTLEKK AIDLQKK+LH LF LFFIFLA
Sbjct: 1   MADLEAHTRPHPSISTETALQALNTLIQLHFEKTLEKKHAIDLQKKQLHNLFHLFFIFLA 60

Query: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120
           LIFL QSLSPRL+CRHCWIPIALLS+SHL+FYVSVAQTLRCIN FKYQRRCHKLTLG AT
Sbjct: 61  LIFLAQSLSPRLQCRHCWIPIALLSLSHLTFYVSVAQTLRCINAFKYQRRCHKLTLGLAT 120

Query: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLATAK 164
           E+LR M+M+IS A   G DGG  DEEFEIHYQEPPESYL   K
Sbjct: 121 EKLRLMKMRISTA-GGGLDGGAADEEFEIHYQEPPESYLGKFK 162

[Close]
BLAST of CsaV3_6G041940 vs. ExPASy TrEMBL
Match: A0A0A0KKV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G485130 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 8.7e-83
Identity = 160/163 (98.16%), Postives = 160/163 (98.16%), Query Frame = 0 

Query: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60
           MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA
Sbjct: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60

Query: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120
           LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT
Sbjct: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120

Query: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLATAK 164
           ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYL   K
Sbjct: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLGKFK 163

[Close]
BLAST of CsaV3_6G041940 vs. ExPASy TrEMBL
Match: A0A1S3B333 (uncharacterized protein LOC103485248 OS=Cucumis melo OX=3656 GN=LOC103485248 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.6e-81
Identity = 157/163 (96.32%), Postives = 159/163 (97.55%), Query Frame = 0 

Query: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60
           MADI+TQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA
Sbjct: 1   MADIETQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60

Query: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120
           LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT
Sbjct: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120

Query: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLATAK 164
           ERLREM+MKISAAVD GFDGGVTDEEFEIHYQEPPESYL   K
Sbjct: 121 ERLREMKMKISAAVDGGFDGGVTDEEFEIHYQEPPESYLGKFK 163

[Close]
BLAST of CsaV3_6G041940 vs. ExPASy TrEMBL
Match: A0A6J1GDE2 (uncharacterized protein LOC111452966 OS=Cucurbita moschata OX=3662 GN=LOC111452966 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 2.5e-66
Identity = 131/163 (80.37%), Postives = 141/163 (86.50%), Query Frame = 0 

Query: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60
           MAD++   R HPSIS ETALQALNT+IQLHFEKTLEKK AIDLQKK+LH LF LFFIFLA
Sbjct: 1   MADLEAHTRPHPSISTETALQALNTLIQLHFEKTLEKKHAIDLQKKQLHNLFHLFFIFLA 60

Query: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120
           LIFL QSLSPRL+CRHCWIPIALLS+SHL+FYVSVAQTLRCIN FKYQRRCHKLTLG AT
Sbjct: 61  LIFLAQSLSPRLQCRHCWIPIALLSLSHLTFYVSVAQTLRCINAFKYQRRCHKLTLGLAT 120

Query: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLATAK 164
           E+LR M+M+IS A   G DGG  DEEFEIHYQEPPESYL   K
Sbjct: 121 EKLRLMKMRISTA-GGGLDGGAADEEFEIHYQEPPESYLGKFK 162

[Close]
BLAST of CsaV3_6G041940 vs. ExPASy TrEMBL
Match: A0A6J1IL37 (uncharacterized protein LOC111478021 OS=Cucurbita maxima OX=3661 GN=LOC111478021 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 8.2e-65
Identity = 129/163 (79.14%), Postives = 139/163 (85.28%), Query Frame = 0 

Query: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60
           MAD++   R HPSIS ETALQALNT+IQLHFEKTLEKK AIDLQKK LH LF LFFIFLA
Sbjct: 1   MADLEAHTRPHPSISTETALQALNTLIQLHFEKTLEKKHAIDLQKKXLHNLFHLFFIFLA 60

Query: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120
           LIFL QSLSPRL+CRHCWIPIALLS+SHL+FYVS+AQTLRCIN FKYQRRCHKLTLG AT
Sbjct: 61  LIFLAQSLSPRLQCRHCWIPIALLSLSHLTFYVSIAQTLRCINAFKYQRRCHKLTLGLAT 120

Query: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLATAK 164
           E+LR M+M+IS A     DGG  DEEFEIHYQEPPESYL   K
Sbjct: 121 EKLRLMKMRISTA-GGVLDGGAADEEFEIHYQEPPESYLGKFK 162

[Close]
BLAST of CsaV3_6G041940 vs. ExPASy TrEMBL
Match: A0A2N9G8E6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23607 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 2.6e-63
Identity = 126/163 (77.30%), Postives = 140/163 (85.89%), Query Frame = 0 

Query: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60
           MAD +T    H +I KETALQALNTIIQLHFEKTLEKKR+IDLQKKELHKLFQLFFIFL+
Sbjct: 1   MADYETH-HHHQAIPKETALQALNTIIQLHFEKTLEKKRSIDLQKKELHKLFQLFFIFLS 60

Query: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120
           LIFL Q+ SPRL+CRHCW+PI LLS+SHL FYVSVAQTLRCINGFKYQRRCHKLTLG AT
Sbjct: 61  LIFLAQANSPRLQCRHCWVPITLLSLSHLIFYVSVAQTLRCINGFKYQRRCHKLTLGLAT 120

Query: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLATAK 164
           E+LREM+MK+S+  +A    GV DE+FEIHYQEPPESY    K
Sbjct: 121 EKLREMKMKMSSTANADHFDGVGDEDFEIHYQEPPESYFGKFK 162

[Close]
BLAST of CsaV3_6G041940 vs. TAIR 10
Match: AT3G18800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 207.2 bits (526), Expect = 1.9e-53
Identity = 116/172 (67.44%), Postives = 130/172 (75.58%), Query Frame = 0 

Query: 1   MADIDTQIRQH--PSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIF 60
           MAD D +I Q+  P I KETALQALN+IIQLHFEKTLEKKRAID QKK+LHKLFQLFFIF
Sbjct: 1   MADYDDEIDQNNQPFIPKETALQALNSIIQLHFEKTLEKKRAIDHQKKKLHKLFQLFFIF 60

Query: 61  LALIFLTQSL-SPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLG 120
           LA+IF + S  S RL CRHCW PI LLS SHL FYVSVAQTLRCINGFKYQRRCHKLTLG
Sbjct: 61  LAVIFFSLSQPSGRLHCRHCWAPICLLSFSHLFFYVSVAQTLRCINGFKYQRRCHKLTLG 120

Query: 121 FATERLREMRMKISAAVDAGFDGGVTDE------EFEIHYQEPPESYLATAK 164
            AT +LR ++ +I+A    G  GG  DE      + E+ YQEPP+SY    K
Sbjct: 121 LATHKLRFIKSRIAAGDFLG--GGDGDEASAAAWDLEVPYQEPPDSYFGKFK 170

The following BLAST results are available for this feature:
BLAST of CsaV3_6G041940 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647470.13.0e-162100.00hypothetical protein Csa_004096 [Cucumis sativus][more]
XP_011657774.11.8e-8298.16uncharacterized protein LOC101206076 [Cucumis sativus][more]
XP_008441005.13.4e-8196.32PREDICTED: uncharacterized protein LOC103485248 [Cucumis melo][more]
XP_038883211.18.1e-7589.09uncharacterized protein LOC120074230 [Benincasa hispida][more]
XP_022949634.15.2e-6680.37uncharacterized protein LOC111452966 [Cucurbita moschata] >XP_023543401.1 unchar... [more]
BLAST of CsaV3_6G041940 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G041940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKV58.7e-8398.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G485130 PE=4 SV=1[more]
A0A1S3B3331.6e-8196.32uncharacterized protein LOC103485248 OS=Cucumis melo OX=3656 GN=LOC103485248 PE=... [more]
A0A6J1GDE22.5e-6680.37uncharacterized protein LOC111452966 OS=Cucurbita moschata OX=3662 GN=LOC1114529... [more]
A0A6J1IL378.2e-6579.14uncharacterized protein LOC111478021 OS=Cucurbita maxima OX=3661 GN=LOC111478021... [more]
A0A2N9G8E62.6e-6377.30Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23607 PE=4 SV=1[more]
BLAST of CsaV3_6G041940 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G18800.11.9e-5367.44unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..266
NoneNo IPR availablePANTHERPTHR36363OS04G0687200 PROTEINcoord: 6..164

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G041940.1CsaV3_6G041940.1mRNA