CsaV3_6G041670 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G041670
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 24237674 .. 24238036 (+)
RNA-Seq ExpressionCsaV3_6G041670
SyntenyCsaV3_6G041670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTTAAGCGCAGGCGGTACGGGCAGCAACAGGCGAGTTCAAAGTCTGTCTTCTCCATTGAAAACCACAATTATTATATACAGGGTATGGTTTTACGGTATGAAAGGGAAGCTGAATCTGCTTCCCCAGCAAGCAGCCATGTTATGCACTAAATCAAATGAGAAAGTCGAAAAATCAATACTGTTCTGGCCGTTGATCAGCCAGCAGTACTTTCCATCGGCTAATAAAATCACTGATTCACTCCGCTCGTGTAGGAAAAACAGGTTACGCACCAACAGCAAAGAATCTATTTTGACATCCAGGGAAACTTTGAAGCCACCCGAACAGAAACAAACTAGCCTTAAACTGCTAGTTGGTTAG

mRNA sequence

ATGTCGTTAAGCGCAGGCGGTACGGGCAGCAACAGGCGAGTTCAAAGTCTGTCTTCTCCATTGAAAACCACAATTATTATATACAGGGTATGGTTTTACGGTATGAAAGGGAAGCTGAATCTGCTTCCCCAGCAAGCAGCCATGTTATGCACTAAATCAAATGAGAAAGTCGAAAAATCAATACTGTTCTGGCCGTTGATCAGCCAGCAGTACTTTCCATCGGCTAATAAAATCACTGATTCACTCCGCTCGTGTAGGAAAAACAGGTTACGCACCAACAGCAAAGAATCTATTTTGACATCCAGGGAAACTTTGAAGCCACCCGAACAGAAACAAACTAGCCTTAAACTGCTAGTTGGTTAG

Coding sequence (CDS)

ATGTCGTTAAGCGCAGGCGGTACGGGCAGCAACAGGCGAGTTCAAAGTCTGTCTTCTCCATTGAAAACCACAATTATTATATACAGGGTATGGTTTTACGGTATGAAAGGGAAGCTGAATCTGCTTCCCCAGCAAGCAGCCATGTTATGCACTAAATCAAATGAGAAAGTCGAAAAATCAATACTGTTCTGGCCGTTGATCAGCCAGCAGTACTTTCCATCGGCTAATAAAATCACTGATTCACTCCGCTCGTGTAGGAAAAACAGGTTACGCACCAACAGCAAAGAATCTATTTTGACATCCAGGGAAACTTTGAAGCCACCCGAACAGAAACAAACTAGCCTTAAACTGCTAGTTGGTTAG

Protein sequence

MSLSAGGTGSNRRVQSLSSPLKTTIIIYRVWFYGMKGKLNLLPQQAAMLCTKSNEKVEKSILFWPLISQQYFPSANKITDSLRSCRKNRLRTNSKESILTSRETLKPPEQKQTSLKLLVG*
Homology
[Close]
BLAST of CsaV3_6G041670 vs. NCBI nr
Match: KGN48356.1 (hypothetical protein Csa_003550 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MSLSAGGTGSNRRVQSLSSPLKTTIIIYRVWFYGMKGKLNLLPQQAAMLCTKSNEKVEKS 60
           MSLSAGGTGSNRRVQSLSSPLKTTIIIYRVWFYGMKGKLNLLPQQAAMLCTKSNEKVEKS
Sbjct: 1   MSLSAGGTGSNRRVQSLSSPLKTTIIIYRVWFYGMKGKLNLLPQQAAMLCTKSNEKVEKS 60

Query: 61  ILFWPLISQQYFPSANKITDSLRSCRKNRLRTNSKESILTSRETLKPPEQKQTSLKLLVG 120
           ILFWPLISQQYFPSANKITDSLRSCRKNRLRTNSKESILTSRETLKPPEQKQTSLKLLVG
Sbjct: 61  ILFWPLISQQYFPSANKITDSLRSCRKNRLRTNSKESILTSRETLKPPEQKQTSLKLLVG 120

[Close]
BLAST of CsaV3_6G041670 vs. ExPASy TrEMBL
Match: A0A0A0KKS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483380 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.0e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MSLSAGGTGSNRRVQSLSSPLKTTIIIYRVWFYGMKGKLNLLPQQAAMLCTKSNEKVEKS 60
           MSLSAGGTGSNRRVQSLSSPLKTTIIIYRVWFYGMKGKLNLLPQQAAMLCTKSNEKVEKS
Sbjct: 1   MSLSAGGTGSNRRVQSLSSPLKTTIIIYRVWFYGMKGKLNLLPQQAAMLCTKSNEKVEKS 60

Query: 61  ILFWPLISQQYFPSANKITDSLRSCRKNRLRTNSKESILTSRETLKPPEQKQTSLKLLVG 120
           ILFWPLISQQYFPSANKITDSLRSCRKNRLRTNSKESILTSRETLKPPEQKQTSLKLLVG
Sbjct: 61  ILFWPLISQQYFPSANKITDSLRSCRKNRLRTNSKESILTSRETLKPPEQKQTSLKLLVG 120

The following BLAST results are available for this feature:
BLAST of CsaV3_6G041670 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48356.12.1e-58100.00hypothetical protein Csa_003550 [Cucumis sativus][more]
BLAST of CsaV3_6G041670 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G041670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKS81.0e-58100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483380 PE=4 SV=1[more]
BLAST of CsaV3_6G041670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G041670.1CsaV3_6G041670.1mRNA