CsaV3_6G041530 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G041530
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 24159221 .. 24159378 (+)
RNA-Seq ExpressionCsaV3_6G041530
SyntenyCsaV3_6G041530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACCTTTGTCATCATGTAAGAATCTAAAGCATATTGACTGTCATATCAAATCTATATGGAGCTCGAGGAACATTGCTTGGACCTTTTGGATGGCTATTAACAAAGCTCGTGGTGTCCTCATCATGTGGATTGATCCACCAAGACAAGCAAATAA

mRNA sequence

ATGCCACCTTTGTCATCATGTAAGAATCTAAAGCATATTGACTGTCATATCAAATCTATATGGAGCTCGAGGAACATTGCTTGGACCTTTTGGATGGCTATTAACAAAGCTCGTGGTGTCCTCATCATGTGGATTGATCCACCAAGACAAGCAAATAA

Coding sequence (CDS)

ATGCCACCTTTGTCATCATGTAAGAATCTAAAGCATATTGACTGTCATATCAAATCTATATGGAGCTCGAGGAACATTGCTTGGACCTTTTGGATGGCTATTAACAAAGCTCGTGGTGTCCTCATCATGTGGATTGATCCACCAAGACAAGCAAATAA

Protein sequence

MPPLSSCKNLKHIDCHIKSIWSSRNIAWTFWMAINKARGVLIMWIDPPRQANX
Homology
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BLAST of CsaV3_6G041530 vs. NCBI nr
Match: KAE8647457.1 (hypothetical protein Csa_003508, partial [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 7.2e-24
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1  MPPLSSCKNLKHIDCHIKSIWSSRNIAWTFWMAINKARGVLIMWIDPPRQAN 53
          MPPLSSCKNLKHIDCHIKSIWSSRNIAWTFWMAINKARGVLIMWIDPPRQAN
Sbjct: 1  MPPLSSCKNLKHIDCHIKSIWSSRNIAWTFWMAINKARGVLIMWIDPPRQAN 52

The following BLAST results are available for this feature:
BLAST of CsaV3_6G041530 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647457.17.2e-24100.00hypothetical protein Csa_003508, partial [Cucumis sativus][more]
BLAST of CsaV3_6G041530 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G041530 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G041530 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G041530.1CsaV3_6G041530.1mRNA