CsaV3_6G041470 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGAGGAGAGAGAGGTAAGTGTGATGGAGTGTATATAAAGAGGAGTGAAGAGTTAAGTAGAGATCATAGAAGTTTGTGAGAGAATTAGACTTATATATATCATATCAAATTAGCTTATAATTTGAAAGATGAGTCGACGGTTTCCCGTTAGTAAACAAATTCTTCCAGTGGATCCATCGGACAGGTCGCTTATTGAGCAATGTGTTCCGCTTGTGATTAATCACTGTCAATCTATACATCAAATTGATGTCAAATTTGAAGGTATTCTACATGGTCAGTGTGAGGTTGGGCCAAATGGCAAAACATATACCCTTAGGTTAAAGCTAAAGGACAAGGTCGGTGATCGTTATGTTCTTAAGATCGGTGTGATTAAATTCTTTTGCCCACTCTTTGGCCCTCCAAGCCTTTTGTCTTTCGAGTGTTCTAAAGAAATCAACGTCTAAAAACCATGATTATGCTATGTATAATGAAAATGGTGCTTTCTCTCTTATATATCTATCAATAAATATGTAAAACCGATCTCTGTTTAAGAATGCAATATTGGATGTTTTAATTTACATTATATTTCGACTTTCTTAATGTCTATCTTCTTCT ATGAGTCGACGGTTTCCCGTTAGTAAACAAATTCTTCCAGTGGATCCATCGGACAGGTCGCTTATTGAGCAATGTGTTCCGCTTGTGATTAATCACTGTCAATCTATACATCAAATTGATGTCAAATTTGAAGGTATTCTACATGGTCAGTGTGAGGTTGGGCCAAATGGCAAAACATATACCCTTAGGTTAAAGCTAAAGGACAAGGTCGGTGATCGTTATGTTCTTAAGATCGGTGTGATTAAATTCTTTTGCCCACTCTTTGGCCCTCCAAGCCTTTTGTCTTTCGAGTGTTCTAAAGAAATCAACGTCTAA ATGAGTCGACGGTTTCCCGTTAGTAAACAAATTCTTCCAGTGGATCCATCGGACAGGTCGCTTATTGAGCAATGTGTTCCGCTTGTGATTAATCACTGTCAATCTATACATCAAATTGATGTCAAATTTGAAGGTATTCTACATGGTCAGTGTGAGGTTGGGCCAAATGGCAAAACATATACCCTTAGGTTAAAGCTAAAGGACAAGGTCGGTGATCGTTATGTTCTTAAGATCGGTGTGATTAAATTCTTTTGCCCACTCTTTGGCCCTCCAAGCCTTTTGTCTTTCGAGTGTTCTAAAGAAATCAACGTCTAA MSRRFPVSKQILPVDPSDRSLIEQCVPLVINHCQSIHQIDVKFEGILHGQCEVGPNGKTYTLRLKLKDKVGDRYVLKIGVIKFFCPLFGPPSLLSFECSKEINV* Homology
BLAST of CsaV3_6G041470 vs. NCBI nr
Match: KGN48337.1 (hypothetical protein Csa_004454 [Cucumis sativus]) HSP 1 Score: 222.2 bits (565), Expect = 2.0e-54 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of CsaV3_6G041470 vs. NCBI nr
Match: KAA0040704.1 (hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa] >TYK00712.1 hypothetical protein E5676_scaffold75352G00010 [Cucumis melo var. makuwa] >TYK14273.1 hypothetical protein E5676_scaffold4170G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 122.5 bits (306), Expect = 2.2e-24 Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 0
BLAST of CsaV3_6G041470 vs. NCBI nr
Match: KAE8647454.1 (hypothetical protein Csa_003781 [Cucumis sativus]) HSP 1 Score: 111.3 bits (277), Expect = 5.1e-21 Identity = 49/95 (51.58%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of CsaV3_6G041470 vs. NCBI nr
Match: XP_031744690.1 (actin-related protein 2-like [Cucumis sativus]) HSP 1 Score: 62.4 bits (150), Expect = 2.7e-06 Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 0
BLAST of CsaV3_6G041470 vs. ExPASy TrEMBL
Match: A0A0A0KIX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483235 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 9.9e-55 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of CsaV3_6G041470 vs. ExPASy TrEMBL
Match: A0A5D3BPM4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4170G00020 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.1e-24 Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 0
BLAST of CsaV3_6G041470 vs. ExPASy TrEMBL
Match: A0A0A0KFK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483240 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.4e-21 Identity = 50/95 (52.63%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of CsaV3_6G041470 vs. ExPASy TrEMBL
Match: A0A0A0KKQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483230 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.6e-20 Identity = 50/95 (52.63%), Postives = 68/95 (71.58%), Query Frame = 0
BLAST of CsaV3_6G041470 vs. ExPASy TrEMBL
Match: A0A0A0KFL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483250 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.3e-18 Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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