CsaV3_6G041350 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTCGTAATTAAGGGATCACCCATTCCAAACATCGATCAGCGAAAGGACGTGCAACAAATTGGAGGGATTGCAGTGGACATACACAACGAAGAAAAATCAGACACTTTGATTTTCCATCGTGTGATAAACGGCCTGGAGCTTGTGATTAATGATATAAATGGTAGCATATTGTCGTATACTCTTGTGGTGGAAGCTATAAATAAGGATAAAAATATCTGGACATATGTGACTTCCATTAAAATTACAAAACCATCAAGCTATGAACTCGTATATTTTAGAGATCCCCTCGGGTACTACCCGAATAGTATGAAAACAATCCTTCTATATGTGTGTGTGTGTGAGAGGCATTATTGTCTTTTGCCTATATGA ATGAGTTTCGTAATTAAGGGATCACCCATTCCAAACATCGATCAGCGAAAGGACGTGCAACAAATTGGAGGGATTGCAGTGGACATACACAACGAAGAAAAATCAGACACTTTGATTTTCCATCGTGTGATAAACGGCCTGGAGCTTGTGATTAATGATATAAATGGTAGCATATTGTCGTATACTCTTGTGGTGGAAGCTATAAATAAGGATAAAAATATCTGGACATATGTGACTTCCATTAAAATTACAAAACCATCAAGCTATGAACTCGTATATTTTAGAGATCCCCTCGGGTACTACCCGAATAGTATGAAAACAATCCTTCTATATGTGTGTGTGTGTGAGAGGCATTATTGTCTTTTGCCTATATGA ATGAGTTTCGTAATTAAGGGATCACCCATTCCAAACATCGATCAGCGAAAGGACGTGCAACAAATTGGAGGGATTGCAGTGGACATACACAACGAAGAAAAATCAGACACTTTGATTTTCCATCGTGTGATAAACGGCCTGGAGCTTGTGATTAATGATATAAATGGTAGCATATTGTCGTATACTCTTGTGGTGGAAGCTATAAATAAGGATAAAAATATCTGGACATATGTGACTTCCATTAAAATTACAAAACCATCAAGCTATGAACTCGTATATTTTAGAGATCCCCTCGGGTACTACCCGAATAGTATGAAAACAATCCTTCTATATGTGTGTGTGTGTGAGAGGCATTATTGTCTTTTGCCTATATGA MSFVIKGSPIPNIDQRKDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSILSYTLVVEAINKDKNIWTYVTSIKITKPSSYELVYFRDPLGYYPNSMKTILLYVCVCERHYCLLPI* Homology
BLAST of CsaV3_6G041350 vs. NCBI nr
Match: KAE8647444.1 (hypothetical protein Csa_003412 [Cucumis sativus]) HSP 1 Score: 253.4 bits (646), Expect = 9.8e-64 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CsaV3_6G041350 vs. NCBI nr
Match: KAE8645934.1 (hypothetical protein Csa_021370 [Cucumis sativus]) HSP 1 Score: 206.1 bits (523), Expect = 1.8e-49 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CsaV3_6G041350 vs. NCBI nr
Match: KAE8645932.1 (hypothetical protein Csa_021380 [Cucumis sativus]) HSP 1 Score: 166.0 bits (419), Expect = 2.1e-37 Identity = 86/102 (84.31%), Postives = 91/102 (89.22%), Query Frame = 0
BLAST of CsaV3_6G041350 vs. NCBI nr
Match: KAE8645933.1 (hypothetical protein Csa_021387 [Cucumis sativus]) HSP 1 Score: 146.4 bits (368), Expect = 1.7e-31 Identity = 78/102 (76.47%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of CsaV3_6G041350 vs. NCBI nr
Match: KAE8645931.1 (hypothetical protein Csa_021386 [Cucumis sativus]) HSP 1 Score: 106.7 bits (265), Expect = 1.5e-19 Identity = 60/101 (59.41%), Postives = 69/101 (68.32%), Query Frame = 0
BLAST of CsaV3_6G041350 vs. ExPASy TrEMBL
Match: A0A0A0LVH4 (Cystatin Hv-CPI6 OS=Cucumis sativus OX=3659 GN=Csa_1G123470 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 5.9e-06 Identity = 37/105 (35.24%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of CsaV3_6G041350 vs. ExPASy TrEMBL
Match: A0A5A7SX36 (Cystatin Hv-CPI6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold836G00250 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 3.8e-05 Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of CsaV3_6G041350 vs. ExPASy TrEMBL
Match: A0A5A7TJK0 (Cysteine proteinase inhibitor A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001140 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 5.5e-04 Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 0
BLAST of CsaV3_6G041350 vs. ExPASy TrEMBL
Match: A0A1S3B5B9 (cysteine proteinase inhibitor A-like OS=Cucumis melo OX=3656 GN=LOC103486185 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 5.5e-04 Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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