CsaV3_6G041320 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G041320
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionAspartic acid proteinase inhibitor
Locationchr6: 23993594 .. 23993869 (+)
RNA-Seq ExpressionCsaV3_6G041320
SyntenyCsaV3_6G041320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACACTGCTGGATTTGGACCTTCAATCGTGATTGGTTCCTGTAATCCGATATTGAAAGACGATCCAAAAGTGATAGAGATGGCGGAGTATGCAGTAAAAGAACAGGGAGAAGATCATTTGATACTGAATAGTGTAGCAGATGGACAGATCGTTACGGTGTTCTTGGGTGGCAACACTTATTATAACCTTCTCATACTTGCTCATCATCCTCGCACATTTCAGGGGTTTTATAGCGCCATTGTGTTGGAAAATACATCCAAAAATGTGAAGGAG

mRNA sequence

ATGGACACTGCTGGATTTGGACCTTCAATCGTGATTGGTTCCTGTAATCCGATATTGAAAGACGATCCAAAAGTGATAGAGATGGCGGAGTATGCAGTAAAAGAACAGGGAGAAGATCATTTGATACTGAATAGTGTAGCAGATGGACAGATCGTTACGGTGTTCTTGGGTGGCAACACTTATTATAACCTTCTCATACTTGCTCATCATCCTCGCACATTTCAGGGGTTTTATAGCGCCATTGTGTTGGAAAATACATCCAAAAATGTGAAGGAG

Coding sequence (CDS)

ATGGACACTGCTGGATTTGGACCTTCAATCGTGATTGGTTCCTGTAATCCGATATTGAAAGACGATCCAAAAGTGATAGAGATGGCGGAGTATGCAGTAAAAGAACAGGGAGAAGATCATTTGATACTGAATAGTGTAGCAGATGGACAGATCGTTACGGTGTTCTTGGGTGGCAACACTTATTATAACCTTCTCATACTTGCTCATCATCCTCGCACATTTCAGGGGTTTTATAGCGCCATTGTGTTGGAAAATACATCCAAAAATGTGAAGGAG

Protein sequence

MDTAGFGPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNTYYNLLILAHHPRTFQGFYSAIVLENTSKNVKE
Homology
BLAST of CsaV3_6G041320 vs. NCBI nr
Match: XP_004151410.1 (uncharacterized protein LOC101213950 [Cucumis sativus] >XP_031744693.1 uncharacterized protein LOC116405126 [Cucumis sativus] >KAE8645937.1 hypothetical protein Csa_021388 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 9.8e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MDTAGFGPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNT 60
          MDTAGFGPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNT
Sbjct: 1  MDTAGFGPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNT 60

Query: 61 YYNLLILAHHPRTFQGFYSAIVLENTSKNVKE 93
          YYNLLILAHHPRTFQGFYSAIVLENTSKNVKE
Sbjct: 61 YYNLLILAHHPRTFQGFYSAIVLENTSKNVKE 92

BLAST of CsaV3_6G041320 vs. NCBI nr
Match: KAE8647441.1 (hypothetical protein Csa_004388, partial [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 9.8e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MDTAGFGPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNT 60
          MDTAGFGPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNT
Sbjct: 1  MDTAGFGPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNT 60

Query: 61 YYNLLILAHHPRTFQGFYSAIVLENTSKNVKE 93
          YYNLLILAHHPRTFQGFYSAIVLENTSKNVKE
Sbjct: 61 YYNLLILAHHPRTFQGFYSAIVLENTSKNVKE 92

BLAST of CsaV3_6G041320 vs. NCBI nr
Match: KAE8645938.1 (hypothetical protein Csa_021378 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 2.6e-29
Identity = 73/93 (78.49%), Postives = 78/93 (83.87%), Query Frame = 0

Query: 1  MDTAGFG-PSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGN 60
          M  AG G PSIVIG+ N I  DDPKVIEMAEYAVKEQGE+ LILNSV  GQIV VFL G+
Sbjct: 1  MAAAGIGQPSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEE-LILNSVQAGQIVEVFLSGD 60

Query: 61 TYYNLLILAHHPRTFQGFYSAIVLENTSKNVKE 93
          TYYNLLILAHHP TFQGFYS IV+ENTSKNVK+
Sbjct: 61 TYYNLLILAHHPHTFQGFYSTIVMENTSKNVKQ 92

BLAST of CsaV3_6G041320 vs. NCBI nr
Match: KAA0025192.1 (aspartic protease inhibitor [Cucumis melo var. makuwa] >TYK07473.1 aspartic protease inhibitor [Cucumis melo var. makuwa])

HSP 1 Score: 138.7 bits (348), Expect = 2.6e-29
Identity = 69/85 (81.18%), Postives = 75/85 (88.24%), Query Frame = 0

Query: 7  GPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNTYYNLLI 66
          G SIVIG+ N I KDDPKVIEMAEYA++EQ +D LILNSVADGQIV VFL GNTYYNL+I
Sbjct: 4  GTSIVIGTSNSITKDDPKVIEMAEYAIREQNQD-LILNSVADGQIVKVFLSGNTYYNLVI 63

Query: 67 LAHHPRTFQGFYSAIVLENTSKNVK 92
          LAHHP TFQGFY+A VLENTSKNVK
Sbjct: 64 LAHHPHTFQGFYNATVLENTSKNVK 87

BLAST of CsaV3_6G041320 vs. NCBI nr
Match: KAE8647440.1 (hypothetical protein Csa_003293, partial [Cucumis sativus])

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 57/68 (83.82%), Postives = 61/68 (89.71%), Query Frame = 0

Query: 25 VIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNTYYNLLILAHHPRTFQGFYSAIVLE 84
          VIEMAEYAVKEQGE+ LILNSV  GQIV VFL G+TYYNLLILAHHP TFQGFYS IV+E
Sbjct: 28 VIEMAEYAVKEQGEE-LILNSVQAGQIVEVFLSGDTYYNLLILAHHPHTFQGFYSTIVME 87

Query: 85 NTSKNVKE 93
          NTSKNVK+
Sbjct: 88 NTSKNVKQ 94

BLAST of CsaV3_6G041320 vs. ExPASy TrEMBL
Match: A0A5A7SJ25 (Aspartic protease inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G002060 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 69/85 (81.18%), Postives = 75/85 (88.24%), Query Frame = 0

Query: 7  GPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNTYYNLLI 66
          G SIVIG+ N I KDDPKVIEMAEYA++EQ +D LILNSVADGQIV VFL GNTYYNL+I
Sbjct: 4  GTSIVIGTSNSITKDDPKVIEMAEYAIREQNQD-LILNSVADGQIVKVFLSGNTYYNLVI 63

Query: 67 LAHHPRTFQGFYSAIVLENTSKNVK 92
          LAHHP TFQGFY+A VLENTSKNVK
Sbjct: 64 LAHHPHTFQGFYNATVLENTSKNVK 87

BLAST of CsaV3_6G041320 vs. ExPASy TrEMBL
Match: Q6DLC8 (Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 9.4e-09
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0

Query: 7  GPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNTYYNLLI 66
          GP   IG    I  +DP+V E+AE+A+K+  E +LIL  V  GQI+      N YYNL++
Sbjct: 8  GPGPAIGGVIGISVNDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPDWNNYYNLIL 67

Query: 67 LA-HHPRTFQGFYSAIVLENTSKN 90
           A H P  F  FY+ +VLE  S N
Sbjct: 68 SAKHSPHEFSKFYNVVVLEKASDN 91

BLAST of CsaV3_6G041320 vs. ExPASy TrEMBL
Match: Q6DKU9 (Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 9.4e-09
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0

Query: 7  GPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNTYYNLLI 66
          GP   IG    I  +DP+V E+AE+A+K+  E +LIL  V  GQI+      N YYNL++
Sbjct: 8  GPGPAIGGVIGISVNDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPDWNNYYNLIL 67

Query: 67 LA-HHPRTFQGFYSAIVLENTSKN 90
           A H P  F  FY+ +VLE  S N
Sbjct: 68 SAKHSPHEFSKFYNVVVLEKASDN 91

BLAST of CsaV3_6G041320 vs. ExPASy TrEMBL
Match: Q2V8I4 (Aspartic acid proteinase inhibitor (Fragment) OS=Cucurbita moschata OX=3662 GN=API PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 9.4e-09
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0

Query: 7  GPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNTYYNLLI 66
          GP   IG    I  +DP+V E+AE+A+K+  E +LIL  V  GQI+      N YYNL++
Sbjct: 1  GPGPAIGEVIGISVNDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPDWNNYYNLIL 60

Query: 67 LA-HHPRTFQGFYSAIVLENTSKN 90
           A H P  F  FY+ +VLE  S N
Sbjct: 61 SAKHSPHEFSKFYNVVVLEKASDN 84

BLAST of CsaV3_6G041320 vs. ExPASy TrEMBL
Match: Q2V8I7 (Aspartic acid proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=API PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.1e-08
Identity = 37/90 (41.11%), Postives = 51/90 (56.67%), Query Frame = 0

Query: 1  MDTAGFGPSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGNT 60
          +D    GP   IG    I  +DP+V E+AE+A+K+  E +LIL  V  GQI+      + 
Sbjct: 2  VDFPHMGPGPPIGEVIGISVNDPRVKEIAEFALKQHAEQNLILGGVDAGQIIKGIPHWDN 61

Query: 61 YYNLLILA-HHPRTFQGFYSAIVLENTSKN 90
          YYNL++ A H P  F  FY+ +VLE  S N
Sbjct: 62 YYNLILSAKHSPHEFSKFYNVVVLEKASDN 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004151410.19.8e-45100.00uncharacterized protein LOC101213950 [Cucumis sativus] >XP_031744693.1 uncharact... [more]
KAE8647441.19.8e-45100.00hypothetical protein Csa_004388, partial [Cucumis sativus][more]
KAE8645938.12.6e-2978.49hypothetical protein Csa_021378 [Cucumis sativus][more]
KAA0025192.12.6e-2981.18aspartic protease inhibitor [Cucumis melo var. makuwa] >TYK07473.1 aspartic prot... [more]
KAE8647440.11.5e-2183.82hypothetical protein Csa_003293, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SJ251.3e-2981.18Aspartic protease inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
Q6DLC89.4e-0944.05Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=4 SV=1[more]
Q6DKU99.4e-0944.05Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=4 SV=1[more]
Q2V8I49.4e-0944.05Aspartic acid proteinase inhibitor (Fragment) OS=Cucurbita moschata OX=3662 GN=A... [more]
Q2V8I72.1e-0841.11Aspartic acid proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=API... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000010Cystatin domainPFAMPF16845SQAPIcoord: 21..91
e-value: 1.8E-7
score: 31.4
NoneNo IPR availableGENE3D3.10.450.10coord: 7..92
e-value: 1.2E-16
score: 62.6
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 19..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G041320.1CsaV3_6G041320.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity