CsaV3_6G040940 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G040940
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	chr6: 23735518 .. 23736482 (+)
RNA-Seq Expression	CsaV3_6G040940
Synteny	CsaV3_6G040940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTAAAATTAAATAAGGCCTAAAAAGCAAACAAACCCCCACTTCAATTTCTTCCCCTTATAAATAATCCCTTCTTACACTCCCCAATTCCCCTGCACTCTCAACTCTGTTCCCTAAACTTCTTCTCTCTTTTAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTTTCCCTAATTTTTCAGGTGAATTTCATTTCAATTCTTTTTCCCTTTATTATTTTCATGTTAAAGATTCAAATTCTAACAAAAAAAAGAAAAACCCATCTTGATTTTTATGCAGATAATTGTTATTAAAACACAGAAGATGAATAGAAGAAACAGTGGAGGAGGAGGTGCAGCAACGCCAAAGCTTGAGCTGAAATTGAACTTATCGCCGCCGAGAGCGAACAGGGGAGTGGAATCACCAAGCCGGTCTGCGACGGTGTCGCCGACGTCGCCGCCGAGTTCGTGTGTGTCGTCGGAAGAGGAGATGAGATATTCGAACAGCCCTGAAACGACGTCGATGATGCTGGTGGGATGTCCACGTTGTTTGATGTACGTTATGTTATCGGAAGAGGATCCGAAATGTCCGAAATGCAAAAGCACTGTTCTTCTTGACGTTCTTCATGATAACGCCGCCGTCAAAACTAGAAAAAACTAAAGACTAAAAAGAAAAAAGAAAAAAAAAAACTACAACAGAGACAGAGAAGATGAACAAGTTCTAGAGAGAGTTTTTTTTTTTTGAGGAATTTTTATGAAGGTAGCTTAGTTTGTTTACTGTGTTGATAGGAAATTAGAAGTGTAGAAGGATTTAGAGAGAGATATGAAGAAGTTTTTCTTTCTTTTCTTTTGTTTATTTGGTGGGGTTAAAGAAAAATATTTAGGTTTAAGATATTTTTTTCTCTCCCTTGTTTTAGTACAAGGACTATGTAACCAGCGTTTAACTACAAGTGCCCAAATGTTTTATGTTTCTTTCTCTTTCTCT

mRNA sequence

ATGAATAGAAGAAACAGTGGAGGAGGAGGTGCAGCAACGCCAAAGCTTGAGCTGAAATTGAACTTATCGCCGCCGAGAGCGAACAGGGGAGTGGAATCACCAAGCCGGTCTGCGACGGTGTCGCCGACGTCGCCGCCGAGTTCGTGTGTGTCGTCGGAAGAGGAGATGAGATATTCGAACAGCCCTGAAACGACGTCGATGATGCTGGTGGGATGTCCACGTTGTTTGATGTACGTTATGTTATCGGAAGAGGATCCGAAATGTCCGAAATGCAAAAGCACTGTTCTTCTTGACGTTCTTCATGATAACGCCGCCGTCAAAACTAGAAAAAACTAA

Coding sequence (CDS)

ATGAATAGAAGAAACAGTGGAGGAGGAGGTGCAGCAACGCCAAAGCTTGAGCTGAAATTGAACTTATCGCCGCCGAGAGCGAACAGGGGAGTGGAATCACCAAGCCGGTCTGCGACGGTGTCGCCGACGTCGCCGCCGAGTTCGTGTGTGTCGTCGGAAGAGGAGATGAGATATTCGAACAGCCCTGAAACGACGTCGATGATGCTGGTGGGATGTCCACGTTGTTTGATGTACGTTATGTTATCGGAAGAGGATCCGAAATGTCCGAAATGCAAAAGCACTGTTCTTCTTGACGTTCTTCATGATAACGCCGCCGTCAAAACTAGAAAAAACTAA

Protein sequence

MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN*

Homology

[Close]

BLAST of CsaV3_6G040940 vs. NCBI nr
Match: XP_004143338.1 (uncharacterized protein LOC101217127 [Cucumis sativus] >KAA0025228.1 uncharacterized protein E6C27_scaffold541G00770 [Cucumis melo var. makuwa] >KGN48289.1 hypothetical protein Csa_003966 [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 4.9e-54
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN 60
           MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN 60

Query: 61  SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 112
           SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN
Sbjct: 61  SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 111

[Close]

BLAST of CsaV3_6G040940 vs. NCBI nr
Match: XP_008462606.1 (PREDICTED: uncharacterized protein LOC103500924, partial [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 9.2e-53
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN 60
           MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN 60

Query: 61  SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRK 111
           SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKT K
Sbjct: 61  SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTEK 110

[Close]

BLAST of CsaV3_6G040940 vs. NCBI nr
Match: XP_022925998.1 (uncharacterized protein LOC111433248 [Cucurbita moschata] >KAG6604328.1 Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034480.1 hypothetical protein SDJN02_04209, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201.8 bits (512), Expect = 3.0e-48
Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MNRRNSGGGG--AATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM-- 60
           MNRRNSGGGG  AA PKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM  
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60

Query: 61  ---RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 112
              RYS+SPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVKTR+N
Sbjct: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 118

[Close]

BLAST of CsaV3_6G040940 vs. NCBI nr
Match: XP_022979077.1 (uncharacterized protein LOC111478822 [Cucurbita maxima])

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47
Identity = 105/118 (88.98%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MNRRNSGGGG--AATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM-- 60
           MNRRNSGGGG  AA PKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM  
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60

Query: 61  ---RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 112
              RYS+SPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVK R+N
Sbjct: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKNRRN 118

[Close]

BLAST of CsaV3_6G040940 vs. NCBI nr
Match: XP_023543892.1 (uncharacterized protein LOC111803624 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 2.0e-47
Identity = 105/119 (88.24%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 1   MNRRNS---GGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM- 60
           MNRRNS   GGG AA PKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM 
Sbjct: 1   MNRRNSGGRGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMT 60

Query: 61  ----RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 112
               RYS+SPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVKTR+N
Sbjct: 61  VGRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 119

[Close]

BLAST of CsaV3_6G040940 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.6e-34
Identity = 77/99 (77.78%), Postives = 84/99 (84.85%), Query Frame = 0


Query: 13  TPKLELKLNLSPPRAN--RGVESPSRSATVSPTSPPSSCVSS-----EEEMRYSNSPETT 72
           +PKLELKLNLSPP ++  R V SPSRSAT SPTSPPSSCVSS     E  +RYS SPETT
Sbjct: 5   SPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETT 64

Query: 73  SMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNA 105
           SM+LVGCPRCLMYVMLSE+DPKCPKCKSTVLLD LH+NA
Sbjct: 65  SMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENA 103

[Close]

BLAST of CsaV3_6G040940 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.2e-24
Identity = 64/108 (59.26%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN 60
           M+RRN  G     PKLEL+LNLSPP +     S  RS   S T+ PSSCVSSE     + 
Sbjct: 1   MSRRNKNG-----PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEENE 60

Query: 61  SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKT 109
           +   TSM+LVGCPRCLMYVMLS++DPKCPKCKSTVLLD L +NA   T
Sbjct: 61  T--ITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAAT 101

[Close]

BLAST of CsaV3_6G040940 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 0


Query: 16  LELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSNSPETTSMMLVGCPRC 75
           L+LKLN+          SPS  +++   S  SS  S E E       E  SM++VGCP C
Sbjct: 11  LDLKLNI----------SPSLDSSLLTESSSSSLCSEEAE---GGGGEAKSMVVVGCPNC 70

Query: 76  LMYVMLS-EEDPKCPKCKSTVLLDVLHDNAAVKT 109
           +MY++ S E DP+CP+C S VLLD L  N + K+
Sbjct: 71  IMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKS 91

[Close]

BLAST of CsaV3_6G040940 vs. ExPASy TrEMBL
Match: A0A5A7SGG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00770 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.3e-54
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN 60
           MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN 60

Query: 61  SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 112
           SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN
Sbjct: 61  SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 111

[Close]

BLAST of CsaV3_6G040940 vs. ExPASy TrEMBL
Match: A0A0A0KHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454370 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.3e-54
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN 60
           MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN 60

Query: 61  SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 112
           SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN
Sbjct: 61  SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 111

[Close]

BLAST of CsaV3_6G040940 vs. ExPASy TrEMBL
Match: A0A1S3CHA8 (uncharacterized protein LOC103500924 OS=Cucumis melo OX=3656 GN=LOC103500924 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.4e-53
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN 60
           MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN 60

Query: 61  SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRK 111
           SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKT K
Sbjct: 61  SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTEK 110

[Close]

BLAST of CsaV3_6G040940 vs. ExPASy TrEMBL
Match: A0A6J1EGT8 (uncharacterized protein LOC111433248 OS=Cucurbita moschata OX=3662 GN=LOC111433248 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48
Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MNRRNSGGGG--AATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM-- 60
           MNRRNSGGGG  AA PKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM  
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60

Query: 61  ---RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 112
              RYS+SPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVKTR+N
Sbjct: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 118

[Close]

BLAST of CsaV3_6G040940 vs. ExPASy TrEMBL
Match: A0A6J1IMT5 (uncharacterized protein LOC111478822 OS=Cucurbita maxima OX=3661 GN=LOC111478822 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.6e-48
Identity = 105/118 (88.98%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MNRRNSGGGG--AATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM-- 60
           MNRRNSGGGG  AA PKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM  
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60

Query: 61  ---RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 112
              RYS+SPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVK R+N
Sbjct: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKNRRN 118

[Close]

BLAST of CsaV3_6G040940 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 146.0 bits (367), Expect = 1.8e-35
Identity = 77/99 (77.78%), Postives = 84/99 (84.85%), Query Frame = 0


Query: 13  TPKLELKLNLSPPRAN--RGVESPSRSATVSPTSPPSSCVSS-----EEEMRYSNSPETT 72
           +PKLELKLNLSPP ++  R V SPSRSAT SPTSPPSSCVSS     E  +RYS SPETT
Sbjct: 5   SPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETT 64

Query: 73  SMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNA 105
           SM+LVGCPRCLMYVMLSE+DPKCPKCKSTVLLD LH+NA
Sbjct: 65  SMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENA 103

[Close]

BLAST of CsaV3_6G040940 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 3.0e-25
Identity = 64/108 (59.26%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSN 60
           M+RRN  G     PKLEL+LNLSPP +     S  RS   S T+ PSSCVSSE     + 
Sbjct: 1   MSRRNKNG-----PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEENE 60

Query: 61  SPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKT 109
           +   TSM+LVGCPRCLMYVMLS++DPKCPKCKSTVLLD L +NA   T
Sbjct: 61  T--ITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAAT 101

[Close]

BLAST of CsaV3_6G040940 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 7.8e-10
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 0


Query: 16  LELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMRYSNSPETTSMMLVGCPRC 75
           L+LKLN+          SPS  +++   S  SS  S E E       E  SM++VGCP C
Sbjct: 11  LDLKLNI----------SPSLDSSLLTESSSSSLCSEEAE---GGGGEAKSMVVVGCPNC 70

Query: 76  LMYVMLS-EEDPKCPKCKSTVLLDVLHDNAAVKT 109
           +MY++ S E DP+CP+C S VLLD L  N + K+
Sbjct: 71  IMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKS 91

[Close]

BLAST of CsaV3_6G040940 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.2e-05
Identity = 24/68 (35.29%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 36 RSATVSPTSPPSSCVSSEEEMR------YSNSPETTSMMLVGCPRCLMYVMLSEEDPKCP 95
          RS +   +S  +SC++  EE++      + +  E   M+++GC  C+MYVM+ +E  +CP
Sbjct: 30 RSPSSDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCP 89

Query: 96 KCKSTVLL 98
          KCK T L+
Sbjct: 90 KCKCTDLI 97

[Close]

BLAST of CsaV3_6G040940 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 3.8e-04
Identity = 20/53 (37.74%), Postives = 30/53 (56.60%), Query Frame = 0


Query: 51  SSEEEMRYSNSPETT---SMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVL 101
           S E++  Y  +   T   S +  GCP CL YV +++ +PKCP+C S V L  +
Sbjct: 196 SPEDDGVYDGTASATVAASQVAAGCPGCLSYVFVAKNNPKCPRCHSFVPLPAM 248

The following BLAST results are available for this feature:

BLAST of CsaV3_6G040940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143338.1	4.9e-54	100.00	uncharacterized protein LOC101217127 [Cucumis sativus] >KAA0025228.1 uncharacter...	[more]
XP_008462606.1	9.2e-53	99.09	PREDICTED: uncharacterized protein LOC103500924, partial [Cucumis melo]	[more]
XP_022925998.1	3.0e-48	89.83	uncharacterized protein LOC111433248 [Cucurbita moschata] >KAG6604328.1 Protein ...	[more]
XP_022979077.1	1.2e-47	88.98	uncharacterized protein LOC111478822 [Cucurbita maxima]	[more]
XP_023543892.1	2.0e-47	88.24	uncharacterized protein LOC111803624 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G040940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	2.6e-34	77.78	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	4.2e-24	59.26	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FMS4	1.1e-08	41.49	Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CsaV3_6G040940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SGG8	2.3e-54	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KHJ4	2.3e-54	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454370 PE=4 SV=1	[more]
A0A1S3CHA8	4.4e-53	99.09	uncharacterized protein LOC103500924 OS=Cucumis melo OX=3656 GN=LOC103500924 PE=...	[more]
A0A6J1EGT8	1.5e-48	89.83	uncharacterized protein LOC111433248 OS=Cucurbita moschata OX=3662 GN=LOC1114332...	[more]
A0A6J1IMT5	5.6e-48	88.98	uncharacterized protein LOC111478822 OS=Cucurbita maxima OX=3661 GN=LOC111478822...	[more]

BLAST of CsaV3_6G040940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	1.8e-35	77.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	3.0e-25	59.26	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G22270.1	7.8e-10	41.49	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52561.1	1.2e-05	35.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G16500.1	3.8e-04	37.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 1..111
None	No IPR available	PANTHER	PTHR33177:SF40	SUBFAMILY NOT NAMED	coord: 1..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G040940.1	CsaV3_6G040940.1	mRNA