CsaV3_6G040030 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G040030
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 23028182 .. 23030031 (-)
RNA-Seq ExpressionCsaV3_6G040030
SyntenyCsaV3_6G040030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATAGAAAATAGAACACTTTACTAATTGTTCAGCCGTACGTAATTAGGTTTACTATTAAAAAATAGGAAAAATATAAATTGAAAAACCCGAAAACTTGAGCAACAAGAAGCTTTAATACGGTCAAAGGCGAATGTTCCTTCTGGATGGTTCTCGACGACGTTCGGTGGGGTGTCCTCTGGCTACATTCCGATCGAAAAGCTCACCTTCCTCACAAACCTCCACAACCAGATGAACATTATCGTTACCTTGTAAGTCACTTTAAGCTTTCACTATTTTCGGATGTTCAGGCAAATTTGACAATGTAGCGAACTCTCGCCTTACATCATCTATATCCACCGCACTTCCTTCCTCTTCGACATCGATGTACAAGCCAAAGCCCCTTTCGTCTATCTATCAGTACGATACGTGATCCCAAACTCTACACGGCCTAGTACAAGCCCCAGTATTTACTTGTCGCTGATTCCCGTCCGGGGTGACGGAGCGAATCCCTAAGTGAAGCCGGCGAGAAAACGGGGGTCGTGATCCCTAACTCTCCATGGCCTAGTTCAAGTCTGCGTCCGGTGATTGAGCGAAACCCTAAGTGGAGCCGGCGAGGAAATGTGGGGTCGGTTGTGAAGAAAAGAAGGTATATTTTGAAAAAAACATGGTAATGATATTTAATTTTAGACACTTAGATCTCTATATGGATACGAAATTCTTTGGCTGTTCGTTTTTGGACAAATTCTCAAACCAACTCGTTTTATAAACAGGGTCATGTGCTGCTTCTATCTATCTCGAGATTGCATCAGTTGCATTGACGTTAGGAAGAAGGTGCTACCTGCTGTTATTGCTAAGCAAAGCAACCCATGGCACCGAAAGGATGGTGTCTTCATGTACTTCGAAGACAATGCTGGTGTCATCGTAAACCCCAAAGGAGAGATGAAGGGTTCTGCTATTACATGGGGGTTCCAATTGGAAAGGAATGTGATGATCTTTGGCCCAGAATTGTAAGTGCTGCTAACGCTATCGCTTGAGTGTCAAATCAAGTGCATTTGTTTCGTCTTTATATTTCGATAGACTAGGGATATTAAGATTTAATTTCATTGTATGGGATTAAATTATTTTATCTTGATGTAAAAAAAGTATTGTTGAGTTTTGGATGAATATTGTATGTTAATTATCTCATATATGATTTCTAGTAACTCATCCAAATTATTTCCTCTCAGAATGTTTGCAGATCAGAAAAGGAAATGATTGGGAGAAAACCATTTCTCGACTTTGCAGCGATGGTTGGGGGTTGTGCATATGGATTCTTTTGGGAATTAACAAGGTAAAAAAAAAAGCAAAATGGAGAATTGATAATCTTTTTTCACTATAAGTTTATTTTGAAAACTTATAAGAAATTGGTACTCAATCTTTTCGTTTAAGAAAATTTTTGAAATTGTGATTAATTGTGCATAAAAAATTTAAACATCAACTACCGTAAATGAGAATACAAAGTTTTGATAATATTGCCTCTGTTAGTTGTTAAATCTACTTGTGTCTATGTTTATACATTACTTTCAATTTTGTGCACAGATTCGAAGTTGGAAGGCATGGGGAGGAGGAGAGACCTCAACTCTCAATTATGAGTTCTCAAATGGTATGCCATTATCCTTTTCTTTGAAAAAGCTTTTTCCTTTAATAGCCTAACTTTTGCATGTTTTGCCCCAATACTTTAAGTTTAACGATTTATTTTCTCATGGACGGATCAACCTTTCCTCTTTGGAACTAAACTAGATGAACTTGTTTTGCGGATAATGCACGATTCAGGCTTACTCACGAAACATCATCTGTGAAAGCCCAACACGAGTTTTTGGACAAAACTT

mRNA sequence

ATGGCACCGAAAGGATGGTGTCTTCATGTACTTCGAAGACAATGCTGGTGTCATCGTAAACCCCAAAGGAGAGATGAAGGGTTCTGCTATTACATGGGGGTTCCAATTGGAAAGGAATGTGATGATCTTTGGCCCAGAATTAATGTTTGCAGATCAGAAAAGGAAATGATTGGGAGAAAACCATTTCTCGACTTTGCAGCGATGGTTGGGGGTTGTGCATATGGATTCTTTTGGGAATTAACAAGATTCGAAGTTGGAAGGCATGGGGAGGAGGAGAGACCTCAACTCTCAATTATGAGTTCTCAAATGATGAACTTGTTTTGCGGATAA

Coding sequence (CDS)

ATGGCACCGAAAGGATGGTGTCTTCATGTACTTCGAAGACAATGCTGGTGTCATCGTAAACCCCAAAGGAGAGATGAAGGGTTCTGCTATTACATGGGGGTTCCAATTGGAAAGGAATGTGATGATCTTTGGCCCAGAATTAATGTTTGCAGATCAGAAAAGGAAATGATTGGGAGAAAACCATTTCTCGACTTTGCAGCGATGGTTGGGGGTTGTGCATATGGATTCTTTTGGGAATTAACAAGATTCGAAGTTGGAAGGCATGGGGAGGAGGAGAGACCTCAACTCTCAATTATGAGTTCTCAAATGATGAACTTGTTTTGCGGATAA

Protein sequence

MAPKGWCLHVLRRQCWCHRKPQRRDEGFCYYMGVPIGKECDDLWPRINVCRSEKEMIGRKPFLDFAAMVGGCAYGFFWELTRFEVGRHGEEERPQLSIMSSQMMNLFCG*
Homology
[Close]
BLAST of CsaV3_6G040030 vs. NCBI nr
Match: KAE8647408.1 (hypothetical protein Csa_003717 [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 6.6e-64
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MAPKGWCLHVLRRQCWCHRKPQRRDEGFCYYMGVPIGKECDDLWPRINVCRSEKEMIGRK 60
           MAPKGWCLHVLRRQCWCHRKPQRRDEGFCYYMGVPIGKECDDLWPRINVCRSEKEMIGRK
Sbjct: 1   MAPKGWCLHVLRRQCWCHRKPQRRDEGFCYYMGVPIGKECDDLWPRINVCRSEKEMIGRK 60

Query: 61  PFLDFAAMVGGCAYGFFWELTRFEVGRHGEEERPQLSIMSSQMMNLFCG 110
           PFLDFAAMVGGCAYGFFWELTRFEVGRHGEEERPQLSIMSSQMMNLFCG
Sbjct: 61  PFLDFAAMVGGCAYGFFWELTRFEVGRHGEEERPQLSIMSSQMMNLFCG 109

The following BLAST results are available for this feature:
BLAST of CsaV3_6G040030 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647408.16.6e-64100.00hypothetical protein Csa_003717 [Cucumis sativus][more]
BLAST of CsaV3_6G040030 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G040030 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G040030 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G040030.1CsaV3_6G040030.1mRNA