CsaV3_6G039070 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G039070
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 22424840 .. 22425781 (-)
RNA-Seq ExpressionCsaV3_6G039070
SyntenyCsaV3_6G039070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTTTGGGCTTTCCTCCGCCGGCGCTTCGGCCCATTTAAGATCAAAACCACGGGCCAGGCTAGAAAATGCCTACGAAATGGGCTTTCATGGGACCAGTAGGACCAAGCCCAAAATTATAAATGAAAATATAAAAATTCCGTTGCCGGGAATCGAACCCGGGTCTCCTGGGTGAAAGCCAGATATCCTAACCGCTGGACGACAACGGATTGTTGAGAGATAAGCTTTAGGTTAATTATATATTGTTTAGTTTCCCCTAAATTTTTATAAAAATAACAATTTAGTCCTTCAACTTTCGGATTACGAAAATTTAATTATTATGCCTCAAAATTTATAACAATTTAGTCCAAATTAAGTGTGAATTTTATTGAGACTTGTTCTTAAATAGACAACTTCGAAATTCAATAATTTTGAAAAATATAATGTCTGTCTTGACATCATAAATTTTGTTTAAGTTTGAACTAAATTGTTACAAATTTGAAAGTTCGAGAACTGAATTGTTACAAGCAAAAGTTTAATGACTAAATGAAGTACTTTTTTTTACCTTGAATGAAACAGTGAAAGCATGTATGACCCTTTAACATTTTAAATCTCTATTATTGAAATTATATTTGAAATTTTCATCCAATAAATATTTAAAATAAATAACATTTATGTCTAAAGTAATGGTAAGAGGATCACAAAAGATATATTGTACTAATCTATTGACCATTAAAATTTTCCAGCTAAAAGAATACCTTCGATCACAAACGACACCTCCTGAGGATCAACTCTTGTATTGAGCTTTTTCTGATGACTTGAGAAAATGGCATGATTCCAACTTTTAGTTGTAGGCAAAATTTACAGCCCCTACCACAAACAGCTACAGCAGCAAAACTTGAGCCACCATTTTTAATGGCAATGGAGATCTTTGGGAGGAAACTTTGTCACATTTGTTGA

mRNA sequence

ATGGGGTTTTGGGCTTTCCTCCGCCGGCGCTTCGGCCCATTTAAGATCAAAACCACGGGCCAGGCTAGAAAATGCCTACGAAATGGGCTTTCATGGGACCAGCAAAATTTACAGCCCCTACCACAAACAGCTACAGCAGCAAAACTTGAGCCACCATTTTTAATGGCAATGGAGATCTTTGGGAGGAAACTTTGTCACATTTGTTGA

Coding sequence (CDS)

ATGGGGTTTTGGGCTTTCCTCCGCCGGCGCTTCGGCCCATTTAAGATCAAAACCACGGGCCAGGCTAGAAAATGCCTACGAAATGGGCTTTCATGGGACCAGCAAAATTTACAGCCCCTACCACAAACAGCTACAGCAGCAAAACTTGAGCCACCATTTTTAATGGCAATGGAGATCTTTGGGAGGAAACTTTGTCACATTTGTTGA

Protein sequence

MGFWAFLRRRFGPFKIKTTGQARKCLRNGLSWDQQNLQPLPQTATAAKLEPPFLMAMEIFGRKLCHIC*
Homology
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BLAST of CsaV3_6G039070 vs. NCBI nr
Match: KAE8647373.1 (hypothetical protein Csa_002765 [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MGFWAFLRRRFGPFKIKTTGQARKCLRNGLSWDQQNLQPLPQTATAAKLEPPFLMAMEIF 60
          MGFWAFLRRRFGPFKIKTTGQARKCLRNGLSWDQQNLQPLPQTATAAKLEPPFLMAMEIF
Sbjct: 1  MGFWAFLRRRFGPFKIKTTGQARKCLRNGLSWDQQNLQPLPQTATAAKLEPPFLMAMEIF 60

Query: 61 GRKLCHIC 69
          GRKLCHIC
Sbjct: 61 GRKLCHIC 68

The following BLAST results are available for this feature:
BLAST of CsaV3_6G039070 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647373.11.1e-32100.00hypothetical protein Csa_002765 [Cucumis sativus][more]
BLAST of CsaV3_6G039070 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G039070 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G039070 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G039070.1CsaV3_6G039070.1mRNA