CsaV3_6G038910 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G038910
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 22307398 .. 22310280 (+)
RNA-Seq ExpressionCsaV3_6G038910
SyntenyCsaV3_6G038910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAATGAGTAGGGGTGAACATTAACATCCAAACTGAAACCAAACAACCCGATACTCAACGGTAAGTTTTTATGAAAAACGATCAGCATTTTAAGAGATTTTTGAAAAATAAACCAACCGATCGAATTTATATTCTGGCCGACAGAACCCGATTGGAATTTAAAATTTTTATAATTATATATATTAGCTTGAGATTTCACTTCTTCCTTCATCTCGACGGGAAAAATCGAATGGACCCAAACCGATCAGCAGTTTGCTCGGTTAAAACTGTTGGCAGTTGGTGGTCGATATCTGATCTTGTAAACTGATCGAGTCGATTTTCAATTGCAGTTTTTTTTTTACAAAACCGCACCCGACTGATAATGAACCCTAGAAATGAGTGCAGGCGAGATGCATCCACCGGCAGTTACCAAATGGACCGAAGTAGAACCCATCCCGCTTATCTTAGATATCCAAGCCCATAAAAATTGAATGGGCCTGCCGCAGAAGCCCATTGTAGATACATACCAAATTAAAACAAAACAAACCATCCTCTCTCCGCAGTTTCCAGCATTTCGAATTTTCTCGCAGTTTCTCTTTCCCCAAGCAGGCTCCAAAGAAACCTTCCGCCATGGCAACATTCAGCCTTCCCCGCAAGGGAAATACGAGGCTGCCGCCGGAGGTCAACAGAGTCTTGTTCGTAAGAAATTTGCCCTTCAACATCACCAGCGAAGAGATGTACGATATCTTCGGCAAATACGGCGCGATACGGCAGATTCGGATTGGTACGAACAAGGATACTAGAGGTACCGCCTTTGTCGTTTACGAAGATATCTATGATGCTAAGACGGCGGTGGATCATCTCTCCGGTTTCAATGTTGCGAATCGGTATCTGATCGTGTTGTACTACCAGCAAGCCAAGATGAGTAAAAAATTCGACCAGAAGAAGAAAGAGGATGAACTCGCTAGGATGCAGGAGAAGTACGGTGTTTCCACGAAAGATAAGTAAAAGGTGTGATATGGAACTTATTTTTCTTAGGATTTTCTTAAGCAATCCTGGAATTGAGTCGAATTGTTTGTTACTTGAAGTTCTCTCTTTTTAGGGTTTAATAGCTGTACCGATGTTTTTAATTGCTGGTCATGAGTGGGCAATGGTTTACTATTTTTGCTTAAATTGTCTTTTTTTTCTTAGTCTTTATATTCTTTGATCATGTCATTATCTGTTTCCGTTAATTATAGTTAAATTGTAAGCATTTGTTCTTAATACCTATCTGGCTTTTTTCAATTCTCTTATATGGTTGGAGTGCTTGGGTAGTAGTTAAGTTCTAAGATATGAATGTGGAAGTTATTACTTTGTGAGTGTGTAGTAAGCTTGGTATCTGTCAGGGGTGTGCAGCCGTTGGTCGGAACCATTTTTTCAACCACGAACTGCCACCGAACCGAATACGGTAGTAAACCGACCTCGAGCATCAAGAAGTAAAAGTCGGTCAACTATATTCTTTAAAACATTTTCCAAAAGAATCCAGTTTGTTTTTTCCCAAACCAACACCAACCGACCTCTTTCTTCTCCGTCCAACCTCCTTCAGTTGGTTGTCTCAGTTTTTCGGTCTGTCACACTCACCCCCTCTATGGTGGCTCTCATCTAATTGGAATAACAGAGCATAAAGCATTCAGTATAATATATACTTTGGGATTATCATCTGTTCTTTCAGAAGCTGATAAAATGGTAGATCATTGTTTGTGCTTGTCAGTGTGCTAGGAAGAAATGACTATGATATTGCATTAGAAATTGAAATTCAGGCCGTCTTTGTGGAAATCTGTTTGCATTTTGCATGATTAAATCTAGTTTGTTGCTCAACAGGTAATTGTTGGGAGAGTAATAATGGAGGAAGTTTTGGCAAATTAGAGACCAACCTATGAGTAGACAGTATGAATCTGTTATAGCTCTACTTTCATTCTTTGGTTGTTCTAAAGTAACTTTCTATGATGGAAACTTTTTAGTTTGCAATATTCATATGCTTTTAAGATTTATGCTATTTTTCTTAGGGCTTCTCAAGATGATACACCCATCTTTATGCAGTCTCATTACACATGAAAAATGAATTAAAATATTTCAAATAAAGAAGTAAGAGGAATTTGTCACGGTGGTAATTAATGATTAGACAATTTGGTGGGATAGGTAAAGATATGTGCTTCTTGCCATCTGAATAGCCCTTGCACAACATCAAGTATCTTAAATTTTATTTTCATAATCGATGCTTTATATTGAAATCATGCATTGAGTAAGGTTTCCTTGGTTTTCTGTCCGACTATTTAGAAAGTCATTTCAAACTAGTACACTACGTATAGTATAAGAGTGAAAGTGAGGATATATCTATCACTCACTTATGTTGACATTATCTTCTATTTCAATCTAAGTCTATACCTTTTTGCATTCAGCATATTCTTGTGGAGAAGTATCAAAGTTTCGAAGATACTAAGTACAAAAATGGCGTTTGTGCCGTTGTTACGAATTCCTATGGGGCCATTTGAACAGAAAAAGAGTGTCTTTGAAGATGATGGTTTAGAAAGCAAGGCGTCTTCTTCGCCCTTACCTAAAATGTTTCCCTTTCATGTTTATTTTTATATTACAATTTTGTTGAAGTTTCTGTTTATGTTGTGTTTGGATTTGGATTGTATTTTCACATTCAGAGTGTCAACAACTATGATAGATCCTCGAGTATATTTTAGTAAAAGAAAGTATATTGTTCGAATCTGTGGGATCGTCCTGTAAAGGACTAATGTGTGTTAGAAATGTGCTCATTGTGTATGATTTGCTCTACCAACCACCAAACCCCCTCATTGTGTATGATTTGCTCTACAAACCACCAAATCCCCAATTATTATTTAGGAAAGAAGTCGAT

mRNA sequence

ATGAACTCGCTAGGATGCAGGAGAAGTACGGTGTTTCCACGAAAGATAAGTAAAAGCATATTCTTGTGGAGAAGTATCAAAGTTTCGAAGATACTAAGTACAAAAATGGCGTTTGTGCCGTTGTTACGAATTCCTATGGGGCCATTTGAACAGAAAAAGAGTGTCTTTGAAGATGATGGTTTAGAAAGCAAGGCGTCTTCTTCGCCCTTACCTAAAATGTTTCCCTTTCATGTTTATTTTTATATTACAATTTTGTTGAAGTTTCTGTTTATGTTGTGTTTGGATTTGGATTGTATTTTCACATTCAGAGTGTCAACAACTATGATAGATCCTCGAGTATATTTTAGTAAAAGAAAGTATATTGTTCGAATCTGTGGGATCGTCCTGTAA

Coding sequence (CDS)

ATGAACTCGCTAGGATGCAGGAGAAGTACGGTGTTTCCACGAAAGATAAGTAAAAGCATATTCTTGTGGAGAAGTATCAAAGTTTCGAAGATACTAAGTACAAAAATGGCGTTTGTGCCGTTGTTACGAATTCCTATGGGGCCATTTGAACAGAAAAAGAGTGTCTTTGAAGATGATGGTTTAGAAAGCAAGGCGTCTTCTTCGCCCTTACCTAAAATGTTTCCCTTTCATGTTTATTTTTATATTACAATTTTGTTGAAGTTTCTGTTTATGTTGTGTTTGGATTTGGATTGTATTTTCACATTCAGAGTGTCAACAACTATGATAGATCCTCGAGTATATTTTAGTAAAAGAAAGTATATTGTTCGAATCTGTGGGATCGTCCTGTAA

Protein sequence

MNSLGCRRSTVFPRKISKSIFLWRSIKVSKILSTKMAFVPLLRIPMGPFEQKKSVFEDDGLESKASSSPLPKMFPFHVYFYITILLKFLFMLCLDLDCIFTFRVSTTMIDPRVYFSKRKYIVRICGIVL*
Homology
[Close]
BLAST of CsaV3_6G038910 vs. NCBI nr
Match: KAE8647370.1 (hypothetical protein Csa_004284 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 2.7e-64
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 

Query: 1   MNSLGCRRSTVFPRKISKSIFLWRSIKVSKILSTKMAFVPLLRIPMGPFEQKKSVFEDDG 60
           MNSLGCRRSTVFPRKISKSIFLWRSIKVSKILSTKMAFVPLLRIPMGPFEQKKSVFEDDG
Sbjct: 1   MNSLGCRRSTVFPRKISKSIFLWRSIKVSKILSTKMAFVPLLRIPMGPFEQKKSVFEDDG 60

Query: 61  LESKASSSPLPKMFPFHVYFYITILLKFLFMLCLDLDCIFTFRVSTTMIDPRVYFSKRKY 120
           LESKASSSPLPKMFPFHVYFYITILLKFLFMLCLDLDCIFTFRVSTTMIDPRVYFSKRKY
Sbjct: 61  LESKASSSPLPKMFPFHVYFYITILLKFLFMLCLDLDCIFTFRVSTTMIDPRVYFSKRKY 120

Query: 121 IVRICGIVL 130
           IVRICGIVL
Sbjct: 121 IVRICGIVL 129

The following BLAST results are available for this feature:
BLAST of CsaV3_6G038910 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647370.12.7e-64100.00hypothetical protein Csa_004284 [Cucumis sativus][more]
BLAST of CsaV3_6G038910 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G038910 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G038910 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G038910.1CsaV3_6G038910.1mRNA