CsaV3_6G038820 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G038820
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 22256315 .. 22256616 (+)
RNA-Seq ExpressionCsaV3_6G038820
SyntenyCsaV3_6G038820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGATAAAACGCGGACCAGAATCAGTGTGGCGTGGGGTCGAAGGGGTTGTGGCGCATCCTGCTTTGGTCGTATCGAACCCGACACGGTGGCTACACGAATGGCTCGGGCGTGCAGGTGTAGATGCACCATCAATTTGGCCGGTGGGTCAAGTGGTTGGCCCATATTCTTTCGTGGAGTCAATCAGCTTCACTCCATTTTTGAGGCGTGAGAATTTAATGCCTTTATTAACCCAACACGTGAATACAATACTTGCCTTCTATTTCGAAAACGACACGCTGGAATGGAACCACCGTCC

mRNA sequence

ATGGAGAAGATAAAACGCGGACCAGAATCAGTGTGGCGTGGGGTCGAAGGGGTTGTGGCGCATCCTGCTTTGGTCGTATCGAACCCGACACGGTGGCTACACGAATGGCTCGGGCGTGCAGGTGTAGATGCACCATCAATTTGGCCGGTGGGTCAAGTGGTTGGCCCATATTCTTTCGTGGAGTCAATCAGCTTCACTCCATTTTTGAGGCGTGAGAATTTAATGCCTTTATTAACCCAACACGTGAATACAATACTTGCCTTCTATTTCGAAAACGACACGCTGGAATGGAACCACCGTCC

Coding sequence (CDS)

ATGGAGAAGATAAAACGCGGACCAGAATCAGTGTGGCGTGGGGTCGAAGGGGTTGTGGCGCATCCTGCTTTGGTCGTATCGAACCCGACACGGTGGCTACACGAATGGCTCGGGCGTGCAGGTGTAGATGCACCATCAATTTGGCCGGTGGGTCAAGTGGTTGGCCCATATTCTTTCGTGGAGTCAATCAGCTTCACTCCATTTTTGAGGCGTGAGAATTTAATGCCTTTATTAACCCAACACGTGAATACAATACTTGCCTTCTATTTCGAAAACGACACGCTGGAATGGAACCACCGTCC

Protein sequence

MEKIKRGPESVWRGVEGVVAHPALVVSNPTRWLHEWLGRAGVDAPSIWPVGQVVGPYSFVESISFTPFLRRENLMPLLTQHVNTILAFYFENDTLEWNHRX
Homology
[Close]
BLAST of CsaV3_6G038820 vs. NCBI nr
Match: KAE8647367.1 (hypothetical protein Csa_003409, partial [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 3.7e-53
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MEKIKRGPESVWRGVEGVVAHPALVVSNPTRWLHEWLGRAGVDAPSIWPVGQVVGPYSFV 60
           MEKIKRGPESVWRGVEGVVAHPALVVSNPTRWLHEWLGRAGVDAPSIWPVGQVVGPYSFV
Sbjct: 1   MEKIKRGPESVWRGVEGVVAHPALVVSNPTRWLHEWLGRAGVDAPSIWPVGQVVGPYSFV 60

Query: 61  ESISFTPFLRRENLMPLLTQHVNTILAFYFENDTLEWNHR 101
           ESISFTPFLRRENLMPLLTQHVNTILAFYFENDTLEWNHR
Sbjct: 61  ESISFTPFLRRENLMPLLTQHVNTILAFYFENDTLEWNHR 100

[Close]
BLAST of CsaV3_6G038820 vs. ExPASy TrEMBL
Match: A0A0A0KK00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429110 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.8e-53
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MEKIKRGPESVWRGVEGVVAHPALVVSNPTRWLHEWLGRAGVDAPSIWPVGQVVGPYSFV 60
           MEKIKRGPESVWRGVEGVVAHPALVVSNPTRWLHEWLGRAGVDAPSIWPVGQVVGPYSFV
Sbjct: 1   MEKIKRGPESVWRGVEGVVAHPALVVSNPTRWLHEWLGRAGVDAPSIWPVGQVVGPYSFV 60

Query: 61  ESISFTPFLRRENLMPLLTQHVNTILAFYFENDTLEWNHR 101
           ESISFTPFLRRENLMPLLTQHVNTILAFYFENDTLEWNHR
Sbjct: 61  ESISFTPFLRRENLMPLLTQHVNTILAFYFENDTLEWNHR 100

The following BLAST results are available for this feature:
BLAST of CsaV3_6G038820 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647367.13.7e-53100.00hypothetical protein Csa_003409, partial [Cucumis sativus][more]
BLAST of CsaV3_6G038820 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G038820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK001.8e-53100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429110 PE=4 SV=1[more]
BLAST of CsaV3_6G038820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G038820.1CsaV3_6G038820.1mRNA