CsaV3_6G038610 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G038610
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	CSL zinc finger domain-containing protein
Location	chr6: 22028636 .. 22032820 (-)
RNA-Seq Expression	CsaV3_6G038610
Synteny	CsaV3_6G038610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATTTAGAGGGAAATTTAAAATAATAAAAAGGAAGGTTTCCGTAATTTCCCCCCTCGACATAGATTTGGCGGTGTTGACGCTTGTTTAATTGTTATTAATAGTAATCCACATTACTTACACAGTTTGTTTTTCAAATCCTTTAAGCTTCCACTTCACTTCTTTCAATCCTTTCCTTATGATTCCTCTTCTAAGGGCCTCCGAAAAGCTTCCAATAATGGCGACGGTGAGACTCTTCGCAACACTGCCGAAGAAGCTTCTGCTGTTGCTAATGGCGCTGATAGTTGTTGTTCACTCTGAAGCTGCAAATACCAACAATGTATACCAACCTTGTGCGGATACTAAGATTCAGAGATCCGATGGATTCACCTTCGGAATCGCATTCTCTTCCCGAGACTCATTCTTCGCTAACCAGTCTCATCAGCTCTCTCCCTGTGACCGTCGTCTTTCTCTTGCTTCGCTTAACTCACAGCTCGCAGTTTTTCGACCTAGAGTAGACCAGATCTCACTTCTCTCCATCAATACTTCCGATTTCTTTCCGGTACTAACTCGATCTTGATTTTATGTGTTTGATTGTTTCCGATACTTGTACAGATCAGTGTTGTTTAGTTTCTAATTTAGTCGATGTTTTTTCTTTTCATTTGTAGAAGTTGGTAGAATTAGGTTATGTTGTTGTTTTTACGTTTTTTTTAAAAAGAAGATTGAGAGAAATGAATGGTTTTCAGTATATTTGTTGGTGAAGAACTTGAAATTACACAATAGAGGTGAGGTAGATAAGCCTCTTAAATATACAACTAATTAGCCGAGGATTAGTTACTAAACTAACTCTAATAATGGTAAGTTAAGATGAACAAGTAAAGTTACTAATGGTACTACTAATAAGTACAGTAAATAGATAAATGATTATGTGCCTTAGCATTATGGATTCTTGATGTTACTTTATTCCCTGGATTGGATGGCGCTCTCGTGAAATCATACATCACTTGGTTGTAATTTTAGCAATATTATGCCATAGTGTACTGTTTCTTACTAACAGATTGCTTGGTATGACTTTTGAGTTTGAAATCTTGTTTGACGAAATGTAGTAGACTTTAGTGAATGAAACTAGATTGATAGTCTACTTGTTCTTCATTATCGCTTCCTTCTCTTACTTGGTTTGAATTTAAAATATTGTTTAATTAGATGTGTTCGTGGAGAAAATTGGATAGATGTCATCTTCATGGTCTTCATTCTTGGTTCCATCTCTTACTCGGTTATAACCTTACAATCTATGCCATTGAATCTTGTCCATGAATGTAGTATCTCATTTGACAAAATATGTCCAATGTCCATTGTGGAAAATAGATAATGAGTTATGGTACTCTTCATGTGGCATTTATTGAATGACGAAAATTTACGGTTATATTCATAACCAATGAATTCATTCTATATCAATTCCCCTCAGGTTGCAATTGCAATTTCTCAGAGTTATTGAAGTGCGATGACCAAGATCGTGCAATGACATTTTATTACTTAGGAATGGAAGTTTTTATGTTAGCCACTTAACTTAAGATTTAATATTTTACAAGTTTTCCTAACATCAAGGTGCATAGAAGTGACTCAAACACCTATTGATATAAAAAAGAGGGGAAGGAGGTTTCTTATAGTGTTGTTAAATGCTGATCCCTACTTGTACGCATGCCTAGTTGTTTCAAAAGAATTCCCTGCTTCTTAATGCAACACCACTATAATTAGTAGAAATGGCCATAATGCTTAATGCCTTGCAATTTTCAGGATGCTTTTGGTGGTTACATGGTGGCTTTTGCTGGAAGAAAGTACGCTGCAAGGTCTCAGCCTGCATTTGTTGCTAATAGCACATTCATAGTGACGAGTTTCACCTTGGTAAGGTTCAAAATTTGGTAACTGTAAAGTAGATACTAGACAAGTTGTAGGTTTTGTTAGCAATCAAACCAATCTGTGACGAATTCCTACTAAAAAAAAATTAAACATTATGATGAATGAAATGGAATTTGGTGGGAGCAGGTACTTGAGTTTCAAAAGGGCAGGCTGCAGAACTTGTACTGGAAACGAGATGGATGTGCTTCATGCTCAGGTAAGTCGAGATCTAGTTATGTCTGCCTTAATAATCAGGATTGTGCGATCAGAACATCGAGTTGTAGAAACCGAGGGGGCAATGTGGATTGTAGTCTGGGAATACAGCTTACGTTTTCAGGCACGGATAAGCATCTTTCAGCACTGAACTCCTGGTATGAAGTAAAAAATCTTCGACAATATTCCCTCTACAATGTGTATTCAAATCTCAGGGATTCTCTTACTGGCCAGTACAACAGGTTCTTCTAATTACTTATTCATCATACTACTCTCAAGGTCTGTTGATTTATAACTTCTATACATTATACTGTTTATCATGGTCTCCTTTCTTGGCTTTGTTATACATCCTTTTTGGCTCCCTTTTCCTTTGTATAGGACATCCCATTTGAAAATCTCTTTGAACTAATGATGTTAGAAGAATAGGCTTAACTGGATAGTTAGTTAATATTATAGGTTTTTTTTCTTAACCCCCCTATTCTTCTTACCTCAACTGATTATGTTTTGTTAGATTTTTTTTCCTTGAAAGGGGCCATTGAGAACCTCTTTGATATTCATCTAGGCCCCGTTTGGTAAGGATTTTTTTTTTATTTTTAAATTAAGCCTATTTCTTCTTGATTTTTTAAAACACTGATGAAACTAGAACAAAAAACTAAATGGTTACCAAACCACGTCGTAGTTTTTGAAATTTGGTTTTATTAGGAGTTCTTTTTTAAAAGTCAATTAAAATTTTGAGAACAAAGAAAATAATAGTTTTTGTTTATTTAATCTGGACTAAGAAATTGAATTCAAAATCGAGTTCTCGTAGTATTTATGATGTATTTGATATTGAATTTGAGAGTGATTTATAAAAATGCAAGTTGAGACCAAAATAAATTGATTTTGAGACTTTTCAAAAGAAATGTTTGAGTCGTATTCTTAAATAACAGTGGACTTTTGCAAAAATAACTAAAAGTTGGTATTTGTGTACATTTTACTTTACATTTCCTCGTCCTGAGACGATTTCCAATTTTTTCTCTTTTGCCATCCTTTTTTTACCTTTGGATTCAAAATTATATTGAAATTTGAAAATATACATTAAGATAATTGGGTTTTGAAGGCTATGTCAGTTTACTTTTTCTTTTCTTCCCTAGTCTATCTCTTAGTACACCTCTAACCTCAGCGGCGAATTCAAAAGTTTTGAGGTAGAGCTTGAACTTAAGTACTTAAGTTTAGAGGGAAAAACTAGAAAACATTTTTTTCACTCAATTGGTTAGGGATATATATATATATATAATGAGCACAAAGTTGTTTAGGATTTTTGTAGTTTATAGAATAGTCTATGATAATTGTGCTTTTAGAATAATAAGTTGTGATTGTGAAAGGACATAAATAGTGTTTAATAAATTTTAGATATATTATAGTAACTGACCCGGTTAAATTTGATAGTAGATGAATAACTCATCTATTTTATATGGAGTATGAGTCTCATTGGTTTTTTCAATGTGGACTCTCAACTTCTCCAACATACCTTGGTAAAATTTGTTATAAAAAATAATATAGCATACGTCATGAAAAATTAAAAGAAAAAAAAAGGAATTGATAGGTGAATTTATATAAAATAAATCATACATACGAAATTGCAAATAAAATGAATTCCAAACCACCACCTCAAAAAAAAAAGAAAGAAAGAAAGAAGAAAGAAGATGGTAGAATAACTTGGGAGGAAGTGATAAAAAAAAACACCCTCACAAAAGATCAGAAGTTGAGGCACAGATCAATTTGTACGTGGATGAAATTACATTTAACATATAAATTGAAAAAGTAAAATAAAATATCAATGTGTTAAAATGGTTGCAATTAAAATCTTGAAGACAAAGTTCTTGAATAAACATCAATCTGTCATTCAATTTTTAGATTTTTTTAAGAGCCATTATCTTATTTAGCACTATAGTCGTCCAAATATGAAAGTCTCTTCATCATTGTGATAAAATGGTTATAGATATCAAAATATGCTATTTTTAAAAGTTTAAAAACTAAAAAGGCATTAAAGTTTAATGACGAGTATAGAACAAAACACAAAGTTTAGAGATTAAAATAGAATTTAACTTGTAGGGA

mRNA sequence

ATGATTCCTCTTCTAAGGGCCTCCGAAAAGCTTCCAATAATGGCGACGGTGAGACTCTTCGCAACACTGCCGAAGAAGCTTCTGCTGTTGCTAATGGCGCTGATAGTTGTTGTTCACTCTGAAGCTGCAAATACCAACAATGTATACCAACCTTGTGCGGATACTAAGATTCAGAGATCCGATGGATTCACCTTCGGAATCGCATTCTCTTCCCGAGACTCATTCTTCGCTAACCAGTCTCATCAGCTCTCTCCCTGTGACCGTCGTCTTTCTCTTGCTTCGCTTAACTCACAGCTCGCAGTTTTTCGACCTAGAGTAGACCAGATCTCACTTCTCTCCATCAATACTTCCGATTTCTTTCCGGATGCTTTTGGTGGTTACATGGTGGCTTTTGCTGGAAGAAAGTACGCTGCAAGGTCTCAGCCTGCATTTGTTGCTAATAGCACATTCATAGTGACGAGTTTCACCTTGGTACTTGAGTTTCAAAAGGGCAGGCTGCAGAACTTGTACTGGAAACGAGATGGATGTGCTTCATGCTCAGGTAAGTCGAGATCTAGTTATGTCTGCCTTAATAATCAGGATTGTGCGATCAGAACATCGAGTTGTAGAAACCGAGGGGGCAATGTGGATTGTAGTCTGGGAATACAGCTTACGTTTTCAGGCACGGATAAGCATCTTTCAGCACTGAACTCCTGGTATGAAGTAAAAAATCTTCGACAATATTCCCTCTACAATGTGTATTCAAATCTCAGGGATTCTCTTACTGGCCAGTACAACAGGTTCTTCTAA

Coding sequence (CDS)

ATGATTCCTCTTCTAAGGGCCTCCGAAAAGCTTCCAATAATGGCGACGGTGAGACTCTTCGCAACACTGCCGAAGAAGCTTCTGCTGTTGCTAATGGCGCTGATAGTTGTTGTTCACTCTGAAGCTGCAAATACCAACAATGTATACCAACCTTGTGCGGATACTAAGATTCAGAGATCCGATGGATTCACCTTCGGAATCGCATTCTCTTCCCGAGACTCATTCTTCGCTAACCAGTCTCATCAGCTCTCTCCCTGTGACCGTCGTCTTTCTCTTGCTTCGCTTAACTCACAGCTCGCAGTTTTTCGACCTAGAGTAGACCAGATCTCACTTCTCTCCATCAATACTTCCGATTTCTTTCCGGATGCTTTTGGTGGTTACATGGTGGCTTTTGCTGGAAGAAAGTACGCTGCAAGGTCTCAGCCTGCATTTGTTGCTAATAGCACATTCATAGTGACGAGTTTCACCTTGGTACTTGAGTTTCAAAAGGGCAGGCTGCAGAACTTGTACTGGAAACGAGATGGATGTGCTTCATGCTCAGGTAAGTCGAGATCTAGTTATGTCTGCCTTAATAATCAGGATTGTGCGATCAGAACATCGAGTTGTAGAAACCGAGGGGGCAATGTGGATTGTAGTCTGGGAATACAGCTTACGTTTTCAGGCACGGATAAGCATCTTTCAGCACTGAACTCCTGGTATGAAGTAAAAAATCTTCGACAATATTCCCTCTACAATGTGTATTCAAATCTCAGGGATTCTCTTACTGGCCAGTACAACAGGTTCTTCTAA

Protein sequence

MIPLLRASEKLPIMATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAGRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDSLTGQYNRFF*

Homology

[Close]

BLAST of CsaV3_6G038610 vs. NCBI nr
Match: XP_004140172.1 (uncharacterized protein LOC101221211 [Cucumis sativus] >KGN48055.1 hypothetical protein Csa_003088 [Cucumis sativus])

HSP 1 Score: 515.4 bits (1326), Expect = 2.9e-142
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MIPLLRASEKLPIMATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRS 60
           MIPLLRASEKLPIMATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRS
Sbjct: 1   MIPLLRASEKLPIMATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRS 60

Query: 61  DGFTFGIAFSSRDSFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFF 120
           DGFTFGIAFSSRDSFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFF
Sbjct: 61  DGFTFGIAFSSRDSFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFF 120

Query: 121 PDAFGGYMVAFAGRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCS 180
           PDAFGGYMVAFAGRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCS
Sbjct: 121 PDAFGGYMVAFAGRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCS 180

Query: 181 GKSRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQ 240
           GKSRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQ
Sbjct: 181 GKSRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQ 240

Query: 241 YSLYNVYSNLRDSLTGQYNRFF 263
           YSLYNVYSNLRDSLTGQYNRFF
Sbjct: 241 YSLYNVYSNLRDSLTGQYNRFF 262

[Close]

BLAST of CsaV3_6G038610 vs. NCBI nr
Match: XP_038900700.1 (uncharacterized protein LOC120087841 [Benincasa hispida])

HSP 1 Score: 478.4 bits (1230), Expect = 4.0e-131
Identity = 241/260 (92.69%), Postives = 251/260 (96.54%), Query Frame = 0


Query: 3   PLLRASEKLPIMATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDG 62
           P+ +AS KLPI+AT+R F T+P KLLLLLM LI  VHSEAANTNNVYQPCADTKIQRSDG
Sbjct: 20  PIQKASAKLPIVATMRFFVTVPMKLLLLLMPLI--VHSEAANTNNVYQPCADTKIQRSDG 79

Query: 63  FTFGIAFSSRDSFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPD 122
           FTFGIAFSSRDSFF+NQSHQLSPCDRRLSLA+LNSQLAVFRPRVD+ISLLSINTSDFFPD
Sbjct: 80  FTFGIAFSSRDSFFSNQSHQLSPCDRRLSLAALNSQLAVFRPRVDEISLLSINTSDFFPD 139

Query: 123 AFGGYMVAFAGRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGK 182
           AFGGYMVAFAGRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGK
Sbjct: 140 AFGGYMVAFAGRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGK 199

Query: 183 SRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYS 242
           SRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHL+ALNSWYEVKNLRQYS
Sbjct: 200 SRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYS 259

Query: 243 LYNVYSNLRDSLTGQYNRFF 263
           LY+VYSNL DSLTGQYNRFF
Sbjct: 260 LYSVYSNLMDSLTGQYNRFF 277

[Close]

BLAST of CsaV3_6G038610 vs. NCBI nr
Match: XP_008449601.1 (PREDICTED: uncharacterized protein LOC103491438 [Cucumis melo])

HSP 1 Score: 472.2 bits (1214), Expect = 2.8e-129
Identity = 238/250 (95.20%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 14  MATVRLFATLPKK-LLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 73
           MATVR+F T+P K LLLLLM LI+VVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR
Sbjct: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60

Query: 74  DSFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 133
           DSFF+NQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA
Sbjct: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120

Query: 134 GRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 193
           GRKYAARSQPAFVAN+TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN
Sbjct: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180

Query: 194 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRD 253
           QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHL+ALNSWYEVKNLRQYSLY+VYSNLRD
Sbjct: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240

Query: 254 SLTGQYNRFF 263
           SLT QYNRFF
Sbjct: 241 SLTSQYNRFF 250

[Close]

BLAST of CsaV3_6G038610 vs. NCBI nr
Match: XP_022943561.1 (uncharacterized protein LOC111448296 [Cucurbita moschata] >XP_022986661.1 uncharacterized protein LOC111484349 [Cucurbita maxima])

HSP 1 Score: 460.7 bits (1184), Expect = 8.5e-126
Identity = 230/249 (92.37%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 14  MATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRD 73
           MATVR+F T+P +LLLLLMAL  ++HSEA NTNNVYQPCADTKIQRSDGFTFGIAFSSRD
Sbjct: 1   MATVRVFVTVPMELLLLLMAL--MLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRD 60

Query: 74  SFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAG 133
           SFF NQSHQLSPCDRRLSLASLNSQLAVFRPRVD+ISLLS+NTSDFFPD FGGYMVAFAG
Sbjct: 61  SFFFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAG 120

Query: 134 RKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ 193
           RKYAARSQPAFVAN TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ
Sbjct: 121 RKYAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ 180

Query: 194 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDS 253
           DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHL+ALN+WYEVKNLRQYSLY+VYSNL DS
Sbjct: 181 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDS 240

Query: 254 LTGQYNRFF 263
           LTGQYNRFF
Sbjct: 241 LTGQYNRFF 247

[Close]

BLAST of CsaV3_6G038610 vs. NCBI nr
Match: KAG7010325.1 (hypothetical protein SDJN02_27118 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 459.5 bits (1181), Expect = 1.9e-125
Identity = 229/249 (91.97%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 14  MATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRD 73
           MATVR+F T+P +LLLLLMAL  ++HSEA NTNNVYQPCADTKIQRSDGFTFGIAFSSRD
Sbjct: 1   MATVRVFVTVPMELLLLLMAL--MLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRD 60

Query: 74  SFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAG 133
           SFF NQSHQLSPCDRRLSLASLNSQLAVFRPRVD+ISLLS+NTSDFFPD FGGYMVAFAG
Sbjct: 61  SFFFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAG 120

Query: 134 RKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ 193
           RKYAARSQPAFVAN TFIVTSFTLVLEFQKG+LQNLYWKRDGCASCSGKSRSSYVCLNNQ
Sbjct: 121 RKYAARSQPAFVANGTFIVTSFTLVLEFQKGKLQNLYWKRDGCASCSGKSRSSYVCLNNQ 180

Query: 194 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDS 253
           DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHL+ALN+WYEVKNLRQYSLY+VYSNL DS
Sbjct: 181 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDS 240

Query: 254 LTGQYNRFF 263
           LTGQYNRFF
Sbjct: 241 LTGQYNRFF 247

[Close]

BLAST of CsaV3_6G038610 vs. ExPASy TrEMBL
Match: A0A0A0KEG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426900 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.4e-142
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MIPLLRASEKLPIMATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRS 60
           MIPLLRASEKLPIMATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRS
Sbjct: 1   MIPLLRASEKLPIMATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRS 60

Query: 61  DGFTFGIAFSSRDSFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFF 120
           DGFTFGIAFSSRDSFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFF
Sbjct: 61  DGFTFGIAFSSRDSFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFF 120

Query: 121 PDAFGGYMVAFAGRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCS 180
           PDAFGGYMVAFAGRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCS
Sbjct: 121 PDAFGGYMVAFAGRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCS 180

Query: 181 GKSRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQ 240
           GKSRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQ
Sbjct: 181 GKSRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQ 240

Query: 241 YSLYNVYSNLRDSLTGQYNRFF 263
           YSLYNVYSNLRDSLTGQYNRFF
Sbjct: 241 YSLYNVYSNLRDSLTGQYNRFF 262

[Close]

BLAST of CsaV3_6G038610 vs. ExPASy TrEMBL
Match: A0A1S3BNB9 (uncharacterized protein LOC103491438 OS=Cucumis melo OX=3656 GN=LOC103491438 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 238/250 (95.20%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 14  MATVRLFATLPKK-LLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 73
           MATVR+F T+P K LLLLLM LI+VVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR
Sbjct: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60

Query: 74  DSFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 133
           DSFF+NQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA
Sbjct: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120

Query: 134 GRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 193
           GRKYAARSQPAFVAN+TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN
Sbjct: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180

Query: 194 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRD 253
           QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHL+ALNSWYEVKNLRQYSLY+VYSNLRD
Sbjct: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240

Query: 254 SLTGQYNRFF 263
           SLT QYNRFF
Sbjct: 241 SLTSQYNRFF 250

[Close]

BLAST of CsaV3_6G038610 vs. ExPASy TrEMBL
Match: A0A6J1JBU3 (uncharacterized protein LOC111484349 OS=Cucurbita maxima OX=3661 GN=LOC111484349 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 4.1e-126
Identity = 230/249 (92.37%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 14  MATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRD 73
           MATVR+F T+P +LLLLLMAL  ++HSEA NTNNVYQPCADTKIQRSDGFTFGIAFSSRD
Sbjct: 1   MATVRVFVTVPMELLLLLMAL--MLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRD 60

Query: 74  SFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAG 133
           SFF NQSHQLSPCDRRLSLASLNSQLAVFRPRVD+ISLLS+NTSDFFPD FGGYMVAFAG
Sbjct: 61  SFFFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAG 120

Query: 134 RKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ 193
           RKYAARSQPAFVAN TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ
Sbjct: 121 RKYAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ 180

Query: 194 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDS 253
           DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHL+ALN+WYEVKNLRQYSLY+VYSNL DS
Sbjct: 181 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDS 240

Query: 254 LTGQYNRFF 263
           LTGQYNRFF
Sbjct: 241 LTGQYNRFF 247

[Close]

BLAST of CsaV3_6G038610 vs. ExPASy TrEMBL
Match: A0A6J1FS19 (uncharacterized protein LOC111448296 OS=Cucurbita moschata OX=3662 GN=LOC111448296 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 4.1e-126
Identity = 230/249 (92.37%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 14  MATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRD 73
           MATVR+F T+P +LLLLLMAL  ++HSEA NTNNVYQPCADTKIQRSDGFTFGIAFSSRD
Sbjct: 1   MATVRVFVTVPMELLLLLMAL--MLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRD 60

Query: 74  SFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAG 133
           SFF NQSHQLSPCDRRLSLASLNSQLAVFRPRVD+ISLLS+NTSDFFPD FGGYMVAFAG
Sbjct: 61  SFFFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAG 120

Query: 134 RKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ 193
           RKYAARSQPAFVAN TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ
Sbjct: 121 RKYAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ 180

Query: 194 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDS 253
           DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHL+ALN+WYEVKNLRQYSLY+VYSNL DS
Sbjct: 181 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDS 240

Query: 254 LTGQYNRFF 263
           LTGQYNRFF
Sbjct: 241 LTGQYNRFF 247

[Close]

BLAST of CsaV3_6G038610 vs. ExPASy TrEMBL
Match: A0A6J1DHN7 (uncharacterized protein LOC111020583 OS=Momordica charantia OX=3673 GN=LOC111020583 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 9.5e-123
Identity = 224/249 (89.96%), Postives = 239/249 (95.98%), Query Frame = 0


Query: 14  MATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRD 73
           MAT+R+F T P +LLLLL+AL+  +HSEAANTNNVYQPCADTKIQRSDGF+FGIAFSSRD
Sbjct: 1   MATMRVFVTAPMELLLLLVALL--LHSEAANTNNVYQPCADTKIQRSDGFSFGIAFSSRD 60

Query: 74  SFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAG 133
           SFF NQSHQLSPCDRRLSL SLNSQLAVFRPRVD+ISLL+INTSDFFPD+FGGYMVAFAG
Sbjct: 61  SFFFNQSHQLSPCDRRLSLPSLNSQLAVFRPRVDEISLLTINTSDFFPDSFGGYMVAFAG 120

Query: 134 RKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ 193
           RKYAARSQPAFVANSTFIVTSFTLVLEF+KGRLQNL+WKRDGC+SCSGKSRSSYVCLNNQ
Sbjct: 121 RKYAARSQPAFVANSTFIVTSFTLVLEFEKGRLQNLFWKRDGCSSCSGKSRSSYVCLNNQ 180

Query: 194 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDS 253
           DCAIRTSSCRNRGG VDCSLGIQLTFSGTDKHL+ALNSWYEVKNLRQYSLY+VYSNL DS
Sbjct: 181 DCAIRTSSCRNRGGTVDCSLGIQLTFSGTDKHLTALNSWYEVKNLRQYSLYSVYSNLMDS 240

Query: 254 LTGQYNRFF 263
           LT QYNRFF
Sbjct: 241 LTSQYNRFF 247

[Close]

BLAST of CsaV3_6G038610 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 359.4 bits (921), Expect = 2.5e-99
Identity = 177/240 (73.75%), Postives = 203/240 (84.58%), Query Frame = 0


Query: 28  LLLLMALIVVV-----HSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFANQSHQ 87
           LL+  A+I+ V        + NTN +Y PC+DT+IQRSDGFTFGIAFSSR SFF NQ+  
Sbjct: 9   LLVFSAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVL 68

Query: 88  LSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAGRKYAARSQP 147
           LSPCDRRLSLA++NSQ +VFRP++D+ISLLSINTS FFPD +GGYMVAFAGRKYAARS P
Sbjct: 69  LSPCDRRLSLAAMNSQFSVFRPKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARSIP 128

Query: 148 AFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRTSSC 207
           AF+ANSTFIVTSFTLV+EFQKGRLQNLYWKRDGCASC G    ++VCLN QDCAIRT SC
Sbjct: 129 AFIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKG--NQNFVCLNKQDCAIRTPSC 188

Query: 208 RNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDSLTGQYNRFF 263
           + RGG VDCSLGIQL FSGTDKHL+ LNSWYEV+NL+QYSLY +YSNL+ SLT Q+N FF
Sbjct: 189 KGRGGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFNNFF 246

[Close]

BLAST of CsaV3_6G038610 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 290.0 bits (741), Expect = 1.9e-78
Identity = 146/242 (60.33%), Postives = 185/242 (76.45%), Query Frame = 0


Query: 27  LLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFA---NQSHQL 86
           L  L  A++    +EA + N VY PC+D+ +   DGFTFGIAF+++DSFF+   ++S Q 
Sbjct: 7   LCCLFAAVLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQY 66

Query: 87  SPCDRRLSLASLNSQLAVFRPRVDQISLLSINT---SDFFPDAFGGYMVAFAGRKYAARS 146
           SPCD R    + NS++AVFRP+VD+I+LL+INT   S F PDA  GYMVAFAG KYAARS
Sbjct: 67  SPCDHRHLSLNGNSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARS 126

Query: 147 QPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRTS 206
            P  VA+S  IVTSFTLVLEFQKGRL+N++WK+DGC+ CSG S+  +VCLN ++CAI+  
Sbjct: 127 LPIMVADSNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSK--FVCLNKEECAIKPQ 186

Query: 207 SCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDSLTGQYNR 263
           +C+N+GG VDCSLGIQL FSGTDKH +ALNSWYEV NL+QYSLY +YSNL+DSLT  +  
Sbjct: 187 NCKNQGGQVDCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFKN 246

[Close]

BLAST of CsaV3_6G038610 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 257.7 bits (657), Expect = 1.0e-68
Identity = 132/240 (55.00%), Postives = 174/240 (72.50%), Query Frame = 0


Query: 28  LLLLMALIVVVHS--EAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFANQSHQLSP 87
           ++++M ++++V     AA+ N VY PC+DT+I + DGFT GIA SS+++FF +Q  QLSP
Sbjct: 126 IMMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQV-QLSP 185

Query: 88  CDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAGRKYAARSQPAFV 147
           CD RL LA+  +QLA+FRP+VD+ISLLSI+TS F P   GG+MV FAG KYAARS P  V
Sbjct: 186 CDTRLGLAAKMAQLALFRPKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSYPVKV 245

Query: 148 ANSTFIVTSFT---------LVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCA 207
           A+ +  +T+FT         LVLEFQKG LQNL+WK  GC  C G   SS VCLN  DCA
Sbjct: 246 ADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCA 305

Query: 208 IRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDSLTG 257
           + TS C+  GG  +C++GIQ+ FSGTD++L +LN+WYEV NLRQYSL ++Y+N  DSL+G
Sbjct: 306 VPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLSG 364

[Close]

BLAST of CsaV3_6G038610 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-13
Identity = 35/51 (68.63%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 127 YMVAFAGRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCA 178
           Y V   G +  +   PAF+ANSTFIVTSFT V+EFQKGRLQNLYWKRD CA
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCA 52

The following BLAST results are available for this feature:

BLAST of CsaV3_6G038610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140172.1	2.9e-142	100.00	uncharacterized protein LOC101221211 [Cucumis sativus] >KGN48055.1 hypothetical ...	[more]
XP_038900700.1	4.0e-131	92.69	uncharacterized protein LOC120087841 [Benincasa hispida]	[more]
XP_008449601.1	2.8e-129	95.20	PREDICTED: uncharacterized protein LOC103491438 [Cucumis melo]	[more]
XP_022943561.1	8.5e-126	92.37	uncharacterized protein LOC111448296 [Cucurbita moschata] >XP_022986661.1 unchar...	[more]
KAG7010325.1	1.9e-125	91.97	hypothetical protein SDJN02_27118 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CsaV3_6G038610 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G038610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEG2	1.4e-142	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426900 PE=4 SV=1	[more]
A0A1S3BNB9	1.4e-129	95.20	uncharacterized protein LOC103491438 OS=Cucumis melo OX=3656 GN=LOC103491438 PE=...	[more]
A0A6J1JBU3	4.1e-126	92.37	uncharacterized protein LOC111484349 OS=Cucurbita maxima OX=3661 GN=LOC111484349...	[more]
A0A6J1FS19	4.1e-126	92.37	uncharacterized protein LOC111448296 OS=Cucurbita moschata OX=3662 GN=LOC1114482...	[more]
A0A6J1DHN7	9.5e-123	89.96	uncharacterized protein LOC111020583 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of CsaV3_6G038610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44150.1	2.5e-99	73.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11800.1	1.9e-78	60.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15910.1	1.0e-68	55.00	CSL zinc finger domain-containing protein	[more]
AT3G48630.1	1.6e-13	68.63	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21454:SF33	SUBFAMILY NOT NAMED	coord: 27..262
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 27..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G038610.1	CsaV3_6G038610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
molecular_function	GO:0046872	metal ion binding