CsaV3_6G037700 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G037700
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 21336247 .. 21338159 (-)
RNA-Seq ExpressionCsaV3_6G037700
SyntenyCsaV3_6G037700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGCCTAACTCCACTCCATAAATATCCACCAATCTCCATCGCTTTTCTCATCTTTTTGTAGAAATCTCATCTCTTTGTTGTATCCACTCTTTCAAATGCTTCCTAACTTTGAATGCAGTTTCTAGTCTTAGGGTTTTACTTTGGTTGTTATTGTTTTAATCTCTTCCTATGATGAAACACTCCCACAATTGATAGGAAGTGCCGTATGACACTCCAAAAAGCGGCGAGAAGCCAAGGAGTTAGACTGATGGTTTCCATCCGCCAGTTAATTCGTCTGCCGATTCGTTTCTACCCTGGAACTAGTTGGTTTATGGGGGATTTTTCTGGTCGGGAATCATCATCTAGTTCCATGATTTCTCCCCGTGTGGTTGATTTGAAACGGGTCTCTGAGGATTTTATTATCTTTTTCTTTCTTTTTGTTTTCTACTTTCGGTTCGATGCCACGTCGGCGATAGCTAAGGGCGGTGACCGTCGATGCTCTGATTGAACCAAGAACAACCCTTTTTCACATCTTGATAGGAATCTGTTTATCTTTTTTCAGTAGATTTACAGAGCCGTTTTGTGTGATTACATTTTTTATAATCTGATATGATCTTTATTCTTAGTTTTGGTTTTCAAGATTTCTTGTTTGAAGGGTTAAGCCGATGAGGATTTGTTCTATTTTAGTTGGAATTACCGACTGAATTTTCATTTTGATGTCAAACAGACTGGCTATCTGAGGCTTTCATATACTCTTCCTTTTTTTTTTCTTTTTAAATTTCAAAATGTAGTATTTACAACATTTTAAATAATTTAAACAAAATCACTCATTAATTTAGATGCCTTATGAACAATGTAATTAGTATCTCTATAACCTAAACTGTTTTAATTAATGATTTGACAATTATATTTTGGTGTATTTGAATGTTGCGCTATGTGGGTAGATAGTAAACTAAATAAAGATGCAGTTTAAATGTATTTTGTTTTTGAATTCATAAGAGAGAGGTGGGTAATTCTTGACCAATTGCCACTTTCCCATGCCAACGATCTTCATGTCCGTCCGGTTGAACTTTAGTTAAGAGTATACACATTTATGCATGAGTATCATTTGGATCAATTACATACGAGGCTGGCGTTATGGTGGGTGAACACACACACAAGTTTCAATGGGGATTTACAACTTGAAGTATTAGATATAGGAACATCTATTTATTTGAGTGAAATTGTAACAAAATTGGAGTTGTAAGTTACAATGATCTTGGTCACTGTTAATCTTTAATTGAAGGTTTTTTTATTTAAGAAATGTACTTTTAAGAATTTTTTTAATCCAGTAAATGAGGGTGCTCTTATATATAATACTTAGTTCAAGTTAAGATGTGGAATATTAACTTTATAGAATTGGATTTCATTTCAATGTATGAATACTGAATTGTAGATGTAATTAATTTATTAGGGTGGTAAAAGGTAAAGTAACTAATTTATATGTAACGGTTGCAACAAAATTATCTTTTTTAATAGAAAAATGAATTTTAGTCTTATACCCTAATATCAATTTTGACAAAGTTATTTGTTGGACAAAAGAACTATGGATGAGTATTAGTGTTATTAATGGTGAAGTAAAAAAAAGGTTGACACAAACTTAGTCGAATAATAATAATGTGTGACAGTTAATCATTGCTTTTTGGTTGTCCAAAGACACATTTTAATTGTTGTGATCCAATCTAGTGATTCAGATTAGAGATAACTAGAAGGTACATGGTTTGCTTTTACTTGATTTCGACTTGTAATGTATTTTTTGTTTTCTCACATGGTTGTATAGAGAATTGTAATGTACCATCTTTAAAGATTGGTGGTTCATTGTTGAATTGTTGTCTTTAGAGATTAGTGGTTAAATATGATAAATTCTAGCTAATCCCAGTAAACTATTATGGCAC

mRNA sequence

ATGACACTCCAAAAAGCGGCGAGAAGCCAAGGAGTTAGACTGATGGTTTCCATCCGCCAGTTAATTCGTCTGCCGATTCGTTTCTACCCTGGAACTAGTTGGTTTATGGGGGATTTTTCTGGTCGGGAATCATCATCTAGTTCCATGATTTCTCCCCGTGTGGTTGATTTGAAACGGGTCTCTGAGGATTTTATTATCTTTTTCTTTCTTTTTGTTTTCTACTTTCGGTTCGATGCCACGTCGGCGATAGCTAAGGGCGGTGACCGTCGATGCTCTGATTGA

Coding sequence (CDS)

ATGACACTCCAAAAAGCGGCGAGAAGCCAAGGAGTTAGACTGATGGTTTCCATCCGCCAGTTAATTCGTCTGCCGATTCGTTTCTACCCTGGAACTAGTTGGTTTATGGGGGATTTTTCTGGTCGGGAATCATCATCTAGTTCCATGATTTCTCCCCGTGTGGTTGATTTGAAACGGGTCTCTGAGGATTTTATTATCTTTTTCTTTCTTTTTGTTTTCTACTTTCGGTTCGATGCCACGTCGGCGATAGCTAAGGGCGGTGACCGTCGATGCTCTGATTGA

Protein sequence

MTLQKAARSQGVRLMVSIRQLIRLPIRFYPGTSWFMGDFSGRESSSSSMISPRVVDLKRVSEDFIIFFFLFVFYFRFDATSAIAKGGDRRCSD*
Homology
[Close]
BLAST of CsaV3_6G037700 vs. NCBI nr
Match: KGN47961.1 (hypothetical protein Csa_003269 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 3.2e-43
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MTLQKAARSQGVRLMVSIRQLIRLPIRFYPGTSWFMGDFSGRESSSSSMISPRVVDLKRV 60
          MTLQKAARSQGVRLMVSIRQLIRLPIRFYPGTSWFMGDFSGRESSSSSMISPRVVDLKRV
Sbjct: 1  MTLQKAARSQGVRLMVSIRQLIRLPIRFYPGTSWFMGDFSGRESSSSSMISPRVVDLKRV 60

Query: 61 SEDFIIFFFLFVFYFRFDATSAIAKGGDRRCSD 94
          SEDFIIFFFLFVFYFRFDATSAIAKGGDRRCSD
Sbjct: 61 SEDFIIFFFLFVFYFRFDATSAIAKGGDRRCSD 93

[Close]
BLAST of CsaV3_6G037700 vs. ExPASy TrEMBL
Match: A0A0A0KJM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421060 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MTLQKAARSQGVRLMVSIRQLIRLPIRFYPGTSWFMGDFSGRESSSSSMISPRVVDLKRV 60
          MTLQKAARSQGVRLMVSIRQLIRLPIRFYPGTSWFMGDFSGRESSSSSMISPRVVDLKRV
Sbjct: 1  MTLQKAARSQGVRLMVSIRQLIRLPIRFYPGTSWFMGDFSGRESSSSSMISPRVVDLKRV 60

Query: 61 SEDFIIFFFLFVFYFRFDATSAIAKGGDRRCSD 94
          SEDFIIFFFLFVFYFRFDATSAIAKGGDRRCSD
Sbjct: 61 SEDFIIFFFLFVFYFRFDATSAIAKGGDRRCSD 93

The following BLAST results are available for this feature:
BLAST of CsaV3_6G037700 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47961.13.2e-43100.00hypothetical protein Csa_003269 [Cucumis sativus][more]
BLAST of CsaV3_6G037700 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G037700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJM31.6e-43100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421060 PE=4 SV=1[more]
BLAST of CsaV3_6G037700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G037700.1CsaV3_6G037700.1mRNA