CsaV3_6G037640 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G037640
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr6: 21312663 .. 21312839 (-)
RNA-Seq Expression	CsaV3_6G037640
Synteny	CsaV3_6G037640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCAAATTAAGCATTTGATTTTCTACCTCTTTTTAATGTCATATTTTGTTAATTATGATTTTGAGTTTAAGGGTATTCCAAAAATACCCTTTAAAGTAGCACTTTCTTCTTTCTTCCTCTTAATTTGCTTTATGCAACAAACAGTGTTGAAACTCATCTTCTCTGATATTGCA

mRNA sequence

ATGGGTCAAATTAAGCATTTGATTTTCTACCTCTTTTTAATGTCATATTTTGTTAATTATGATTTTGAGTTTAAGGGTATTCCAAAAATACCCTTTAAAGTAGCACTTTCTTCTTTCTTCCTCTTAATTTGCTTTATGCAACAAACAGTGTTGAAACTCATCTTCTCTGATATTGCA

Coding sequence (CDS)

ATGGGTCAAATTAAGCATTTGATTTTCTACCTCTTTTTAATGTCATATTTTGTTAATTATGATTTTGAGTTTAAGGGTATTCCAAAAATACCCTTTAAAGTAGCACTTTCTTCTTTCTTCCTCTTAATTTGCTTTATGCAACAAACAGTGTTGAAACTCATCTTCTCTGATATTGCA

Protein sequence

MGQIKHLIFYLFLMSYFVNYDFEFKGIPKIPFKVALSSFFLLICFMQQTVLKLIFSDIA

Homology

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BLAST of CsaV3_6G037640 vs. NCBI nr
Match: KAE8647340.1 (hypothetical protein Csa_003838, partial [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MGQIKHLIFYLFLMSYFVNYDFEFKGIPKIPFKVALSSFFLLICFMQQTVLKLIFSDIA 60
          MGQIKHLIFYLFLMSYFVNYDFEFKGIPKIPFKVALSSFFLLICFMQQTVLKLIFSDIA
Sbjct: 1  MGQIKHLIFYLFLMSYFVNYDFEFKGIPKIPFKVALSSFFLLICFMQQTVLKLIFSDIA 59

The following BLAST results are available for this feature:

BLAST of CsaV3_6G037640 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647340.1	1.2e-22	100.00	hypothetical protein Csa_003838, partial [Cucumis sativus]	[more]

BLAST of CsaV3_6G037640 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G037640 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G037640 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G037640.1	CsaV3_6G037640.1	mRNA