CsaV3_6G037350 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G037350
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 21027684 .. 21028005 (-)
RNA-Seq ExpressionCsaV3_6G037350
SyntenyCsaV3_6G037350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGAAACGGATGCAGTTGGTAGGCTCGAATTTGGAGCTTTAATGGCGTTGGATTTGGTTGGTGATTGGTATTTTGAGAGCTTAAACGTTTTGGAACCCTCTCGTACTCTTTTCAAATTTCACTTTTGACTCTTCCCTTCGTTCCATTTCCTTTTAACACACGATGTCTTCGCCACGGGGTTTGGTAGCGTCGTTGCGCTGCGCTCTCTCGAACCTTTCAGTGCCGATGCAGCCCATAGCAAGCCCGTGTACCCGGTCCAAGGACTTTTTTATCTTCTCGTTTCTTTTCAAAGTCTTTATACCTTCAAATCGTCTCTAA

mRNA sequence

ATGAGAGAAACGGATGCAGTTGGTAGGCTCGAATTTGGAGCTTTAATGGCGTTGGATTTGGTTGGTGATTGGTATTTTGAGAGCTTAAACGTTTTGGAACCCTCTCCGTCGTTGCGCTGCGCTCTCTCGAACCTTTCAGTGCCGATGCAGCCCATAGCAAGCCCGTGTACCCGGTCCAAGGACTTTTTTATCTTCTCGTTTCTTTTCAAAGTCTTTATACCTTCAAATCGTCTCTAA

Coding sequence (CDS)

ATGAGAGAAACGGATGCAGTTGGTAGGCTCGAATTTGGAGCTTTAATGGCGTTGGATTTGGTTGGTGATTGGTATTTTGAGAGCTTAAACGTTTTGGAACCCTCTCCGTCGTTGCGCTGCGCTCTCTCGAACCTTTCAGTGCCGATGCAGCCCATAGCAAGCCCGTGTACCCGGTCCAAGGACTTTTTTATCTTCTCGTTTCTTTTCAAAGTCTTTATACCTTCAAATCGTCTCTAA

Protein sequence

MRETDAVGRLEFGALMALDLVGDWYFESLNVLEPSPSLRCALSNLSVPMQPIASPCTRSKDFFIFSFLFKVFIPSNRL*
Homology
[Close]
BLAST of CsaV3_6G037350 vs. NCBI nr
Match: KGN47921.1 (hypothetical protein Csa_004283 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 3.2e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MRETDAVGRLEFGALMALDLVGDWYFESLNVLEPSPSLRCALSNLSVPMQPIASPCTRSK 60
          MRETDAVGRLEFGALMALDLVGDWYFESLNVLEPSPSLRCALSNLSVPMQPIASPCTRSK
Sbjct: 1  MRETDAVGRLEFGALMALDLVGDWYFESLNVLEPSPSLRCALSNLSVPMQPIASPCTRSK 60

Query: 61 DFFIFSFLFKVFIPSNRL 79
          DFFIFSFLFKVFIPSNRL
Sbjct: 61 DFFIFSFLFKVFIPSNRL 78

[Close]
BLAST of CsaV3_6G037350 vs. ExPASy TrEMBL
Match: A0A0A0KJH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411250 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.6e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MRETDAVGRLEFGALMALDLVGDWYFESLNVLEPSPSLRCALSNLSVPMQPIASPCTRSK 60
          MRETDAVGRLEFGALMALDLVGDWYFESLNVLEPSPSLRCALSNLSVPMQPIASPCTRSK
Sbjct: 1  MRETDAVGRLEFGALMALDLVGDWYFESLNVLEPSPSLRCALSNLSVPMQPIASPCTRSK 60

Query: 61 DFFIFSFLFKVFIPSNRL 79
          DFFIFSFLFKVFIPSNRL
Sbjct: 61 DFFIFSFLFKVFIPSNRL 78

The following BLAST results are available for this feature:
BLAST of CsaV3_6G037350 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47921.13.2e-36100.00hypothetical protein Csa_004283 [Cucumis sativus][more]
BLAST of CsaV3_6G037350 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G037350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJH31.6e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411250 PE=4 SV=1[more]
BLAST of CsaV3_6G037350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G037350.1CsaV3_6G037350.1mRNA