CsaV3_6G036320 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G036320
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	AP2-like ethylene-responsive transcription factor At1g79700
Location	chr6: 20181470 .. 20182137 (+)
RNA-Seq Expression	CsaV3_6G036320
Synteny	CsaV3_6G036320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGTGGGAAGCAAGAATTGGAAGAGTTTTTGGCAACAAGTATTTATACCTTGGAACATACAGTGAGTATATTTCAACTTAAAATTCGAATGATCTTCTTAAGAGTCTAAATAGTCGAACTAAATATAACAAATGTGTAGGTACACAAGAGGAAGCAGCAAGAGCATACGACATAGCTGCAATAGAATACAGAGGCATAAATGCAGTGACCAACTTCGATTTGAGCACGTACATAAGATGGCTTAAACCTCAAACAAATCCAAATCCAAAACAACAACTTTCTCCCCCAATTTCTTCCTCTTTGTTTCCAATTGATTATAACACAAACAATACCCTAAAATCTTCAAATAATGATCTTCATTTTCCAATCTTTCAATCCATCAATAATGATGATAATAATGTTATTATTCCCACAAACCCACAAACTTCCCCTCGCACAGCCCTTGGGCTCCTCCTAAAATCTTCCCTTTTCAAACACCTTGTGGAGAAGAACATTGTGAATGTTAATGAAGAAGAGGATCCTAAAGATAATGAAGTTAGAGGGCTACTTGACTTTGTTGATGATTCTAATATTAATCCTTACTTCAATTTGCATTATCCATGTCAAGGAACCACCAATTTATCACTATCTACTACCCCTTTCCATTTCTCCACTTTGGTTTGA

mRNA sequence

ATGGGAGGTGGGAAGCAAGAATTGGAAGAGTTTTTGGCAACAAGTACACAAGAGGAAGCAGCAAGAGCATACGACATAGCTGCAATAGAATACAGAGGCATAAATGCAGTGACCAACTTCGATTTGAGCACGTACATAAGATGGCTTAAACCTCAAACAAATCCAAATCCAAAACAACAACTTTCTCCCCCAATTTCTTCCTCTTTGTTTCCAATTGATTATAACACAAACAATACCCTAAAATCTTCAAATAATGATCTTCATTTTCCAATCTTTCAATCCATCAATAATGATGATAATAATGTTATTATTCCCACAAACCCACAAACTTCCCCTCGCACAGCCCTTGGGCTCCTCCTAAAATCTTCCCTTTTCAAACACCTTGTGGAGAAGAACATTGTGAATGTTAATGAAGAAGAGGATCCTAAAGATAATGAAGTTAGAGGGCTACTTGACTTTGTTGATGATTCTAATATTAATCCTTACTTCAATTTGCATTATCCATGTCAAGGAACCACCAATTTATCACTATCTACTACCCCTTTCCATTTCTCCACTTTGGTTTGA

Coding sequence (CDS)

ATGGGAGGTGGGAAGCAAGAATTGGAAGAGTTTTTGGCAACAAGTACACAAGAGGAAGCAGCAAGAGCATACGACATAGCTGCAATAGAATACAGAGGCATAAATGCAGTGACCAACTTCGATTTGAGCACGTACATAAGATGGCTTAAACCTCAAACAAATCCAAATCCAAAACAACAACTTTCTCCCCCAATTTCTTCCTCTTTGTTTCCAATTGATTATAACACAAACAATACCCTAAAATCTTCAAATAATGATCTTCATTTTCCAATCTTTCAATCCATCAATAATGATGATAATAATGTTATTATTCCCACAAACCCACAAACTTCCCCTCGCACAGCCCTTGGGCTCCTCCTAAAATCTTCCCTTTTCAAACACCTTGTGGAGAAGAACATTGTGAATGTTAATGAAGAAGAGGATCCTAAAGATAATGAAGTTAGAGGGCTACTTGACTTTGTTGATGATTCTAATATTAATCCTTACTTCAATTTGCATTATCCATGTCAAGGAACCACCAATTTATCACTATCTACTACCCCTTTCCATTTCTCCACTTTGGTTTGA

Protein sequence

MGGGKQELEEFLATSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDYNTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIVNVNEEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV*

Homology

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BLAST of CsaV3_6G036320 vs. NCBI nr
Match: KAE8647298.1 (hypothetical protein Csa_003998 [Cucumis sativus])

HSP 1 Score: 379.4 bits (973), Expect = 1.8e-101
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MGGGKQELEEFLATSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQ 60
           MGGGKQELEEFLATSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQ
Sbjct: 1   MGGGKQELEEFLATSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQ 60

Query: 61  LSPPISSSLFPIDYNTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLL 120
           LSPPISSSLFPIDYNTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLL
Sbjct: 61  LSPPISSSLFPIDYNTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLL 120

Query: 121 KSSLFKHLVEKNIVNVNEEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTT 180
           KSSLFKHLVEKNIVNVNEEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTT
Sbjct: 121 KSSLFKHLVEKNIVNVNEEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTT 180

Query: 181 PFHFSTLV 189
           PFHFSTLV
Sbjct: 181 PFHFSTLV 188

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BLAST of CsaV3_6G036320 vs. NCBI nr
Match: XP_031742891.1 (AP2-like ethylene-responsive transcription factor At1g79700 [Cucumis sativus])

HSP 1 Score: 352.4 bits (903), Expect = 2.4e-93
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDY 74
           STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDY
Sbjct: 196 STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDY 255

Query: 75  NTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIV 134
           NTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIV
Sbjct: 256 NTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIV 315

Query: 135 NVNEEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV 189
           NVNEEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV
Sbjct: 316 NVNEEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV 369

[Close]

BLAST of CsaV3_6G036320 vs. NCBI nr
Match: XP_008456799.1 (PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700 [Cucumis melo])

HSP 1 Score: 311.6 bits (797), Expect = 4.6e-81
Identity = 163/180 (90.56%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQT----NPNPKQQLSPPISSSLF 74
           STQEEAARAYDIAAIEYRGINAVTNFDL+TYIRWLKPQT    NPNPKQQLSPPI SSLF
Sbjct: 195 STQEEAARAYDIAAIEYRGINAVTNFDLNTYIRWLKPQTNPNQNPNPKQQLSPPIISSLF 254

Query: 75  PIDYNTNNTLKSSNNDLHFPIFQSINND-DNNVIIPTNPQTSPRTALGLLLKSSLFKHLV 134
           PIDYNT+NTLKSSN DL FPIFQSINND DN+VIIPT PQTSPRTALGLLLKSSLFKHLV
Sbjct: 255 PIDYNTDNTLKSSNKDLRFPIFQSINNDHDNDVIIPTTPQTSPRTALGLLLKSSLFKHLV 314

Query: 135 EKNIVNV-NEEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV 189
           EKNIVN  NEEEDPKDNEVRGLLDFVDDSN NPYFNLHYPC GTTNLSLSTTPFHFSTL+
Sbjct: 315 EKNIVNANNEEEDPKDNEVRGLLDFVDDSN-NPYFNLHYPCLGTTNLSLSTTPFHFSTLI 373

[Close]

BLAST of CsaV3_6G036320 vs. NCBI nr
Match: XP_022998979.1 (ethylene-responsive transcription factor WRI1-like [Cucurbita maxima])

HSP 1 Score: 174.5 bits (441), Expect = 8.8e-40
Identity = 109/178 (61.24%), Postives = 120/178 (67.42%), Query Frame = 0


Query: 16  TQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDYN 75
           TQEEAARAYDIAAIEYRG+NAVTNF+LS+YIRWL    NPNP Q  SPP+S   F ID N
Sbjct: 187 TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWL----NPNPMQP-SPPLS---FSIDTN 246

Query: 76  TNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIVN 135
           T +                     N+  IPT P+TSPRTALGLLLKSSLFKHL+EKN+VN
Sbjct: 247 TTS---------------------NSAFIPTAPRTSPRTALGLLLKSSLFKHLMEKNVVN 306

Query: 136 VN-----EEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV 189
           VN     EEE P D E R LL FVD    NPY +L Y CQGTTNLSLS TPFH+  LV
Sbjct: 307 VNGDAEMEEEYPMD-EGRALLSFVDP---NPYLHLQYSCQGTTNLSLS-TPFHYFALV 330

[Close]

BLAST of CsaV3_6G036320 vs. NCBI nr
Match: XP_022946897.1 (ethylene-responsive transcription factor WRI1-like [Cucurbita moschata])

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-39
Identity = 107/176 (60.80%), Postives = 119/176 (67.61%), Query Frame = 0


Query: 16  TQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDYN 75
           TQEEAARAYDIAAIEYRG+NAVTNF+LS+YIRWLK    PNP Q  SPP+S   F ID N
Sbjct: 187 TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLK----PNPMQP-SPPLS---FSIDTN 246

Query: 76  TNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIVN 135
           T +                     NN  IPT PQTSPRTALGLLLKSSLFKHL+EKN+VN
Sbjct: 247 TTS---------------------NNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVN 306

Query: 136 VN----EEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTL 188
           VN     EE+   +E R LL FV+    NPY +L Y CQGTTNLSLS TPFH+S L
Sbjct: 307 VNGNAEMEEEYSMDEGRALLSFVEP---NPYLHLQYSCQGTTNLSLS-TPFHYSAL 329

[Close]

BLAST of CsaV3_6G036320 vs. ExPASy Swiss-Prot
Match: Q94AN4 (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana OX=3702 GN=At1g16060 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.1e-08
Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNP---------NPKQQLSPPI 74
           +TQEEAA AYDIAAIEYRG+NAVTNFD+S Y++   P+ NP         +P   LSP I
Sbjct: 192 ATQEEAAIAYDIAAIEYRGLNAVTNFDISRYLKLPVPE-NPIDTANNLLESPHSDLSPFI 251

Query: 75  SSSLFPIDYNTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNP 109
             +    D + + +    N+D    + +S       VI P+ P
Sbjct: 252 KPN-HESDLSQSQSSSEDNDDRKTKLLKSSPLVAEEVIGPSTP 292

[Close]

BLAST of CsaV3_6G036320 vs. ExPASy Swiss-Prot
Match: Q6X5Y6 (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN=WRI1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-07
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLK 51
           +TQEEAA AYD+AAIEYRG NAVTNFD+S YI  LK
Sbjct: 199 NTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLK 234

[Close]

BLAST of CsaV3_6G036320 vs. ExPASy Swiss-Prot
Match: A0JPZ8 (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana OX=3702 GN=At1g79700 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.1e-07
Identity = 37/69 (53.62%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPI-SSSLFPID 74
           +TQEEAA AYDIAAIEYRG+NAVTNFD+S   R+L P    +     S PI S S  P  
Sbjct: 176 ATQEEAAIAYDIAAIEYRGLNAVTNFDVS---RYLNPNAAADKADSDSKPIRSPSREPES 235

Query: 75  YNTNNTLKS 83
            + N + KS
Sbjct: 236 SDDNKSPKS 241

[Close]

BLAST of CsaV3_6G036320 vs. ExPASy Swiss-Prot
Match: Q6PQQ3 (AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana OX=3702 GN=AIL5 PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06
Identity = 25/31 (80.65%), Postives = 29/31 (93.55%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTY 46
           STQEEAA AYDIAAI++RG+NAVTNFD+S Y
Sbjct: 337 STQEEAAEAYDIAAIKFRGLNAVTNFDISRY 367

[Close]

BLAST of CsaV3_6G036320 vs. ExPASy Swiss-Prot
Match: Q1PFE1 (AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana OX=3702 GN=AIL1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.3e-06
Identity = 24/31 (77.42%), Postives = 29/31 (93.55%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTY 46
           STQEEAA AYDIAAI++RG+NAVTNFD++ Y
Sbjct: 357 STQEEAAEAYDIAAIKFRGLNAVTNFDINRY 387

[Close]

BLAST of CsaV3_6G036320 vs. ExPASy TrEMBL
Match: A0A0A0KJ57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404260 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.1e-93
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDY 74
           STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDY
Sbjct: 193 STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDY 252

Query: 75  NTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIV 134
           NTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIV
Sbjct: 253 NTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIV 312

Query: 135 NVNEEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV 189
           NVNEEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV
Sbjct: 313 NVNEEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV 366

[Close]

BLAST of CsaV3_6G036320 vs. ExPASy TrEMBL
Match: A0A1S3C431 (AP2-like ethylene-responsive transcription factor At1g79700 OS=Cucumis melo OX=3656 GN=LOC103496639 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.2e-81
Identity = 163/180 (90.56%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQT----NPNPKQQLSPPISSSLF 74
           STQEEAARAYDIAAIEYRGINAVTNFDL+TYIRWLKPQT    NPNPKQQLSPPI SSLF
Sbjct: 195 STQEEAARAYDIAAIEYRGINAVTNFDLNTYIRWLKPQTNPNQNPNPKQQLSPPIISSLF 254

Query: 75  PIDYNTNNTLKSSNNDLHFPIFQSINND-DNNVIIPTNPQTSPRTALGLLLKSSLFKHLV 134
           PIDYNT+NTLKSSN DL FPIFQSINND DN+VIIPT PQTSPRTALGLLLKSSLFKHLV
Sbjct: 255 PIDYNTDNTLKSSNKDLRFPIFQSINNDHDNDVIIPTTPQTSPRTALGLLLKSSLFKHLV 314

Query: 135 EKNIVNV-NEEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV 189
           EKNIVN  NEEEDPKDNEVRGLLDFVDDSN NPYFNLHYPC GTTNLSLSTTPFHFSTL+
Sbjct: 315 EKNIVNANNEEEDPKDNEVRGLLDFVDDSN-NPYFNLHYPCLGTTNLSLSTTPFHFSTLI 373

[Close]

BLAST of CsaV3_6G036320 vs. ExPASy TrEMBL
Match: A0A6J1KFT6 (ethylene-responsive transcription factor WRI1-like OS=Cucurbita maxima OX=3661 GN=LOC111493509 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 4.3e-40
Identity = 109/178 (61.24%), Postives = 120/178 (67.42%), Query Frame = 0


Query: 16  TQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDYN 75
           TQEEAARAYDIAAIEYRG+NAVTNF+LS+YIRWL    NPNP Q  SPP+S   F ID N
Sbjct: 187 TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWL----NPNPMQP-SPPLS---FSIDTN 246

Query: 76  TNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIVN 135
           T +                     N+  IPT P+TSPRTALGLLLKSSLFKHL+EKN+VN
Sbjct: 247 TTS---------------------NSAFIPTAPRTSPRTALGLLLKSSLFKHLMEKNVVN 306

Query: 136 VN-----EEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTLV 189
           VN     EEE P D E R LL FVD    NPY +L Y CQGTTNLSLS TPFH+  LV
Sbjct: 307 VNGDAEMEEEYPMD-EGRALLSFVDP---NPYLHLQYSCQGTTNLSLS-TPFHYFALV 330

[Close]

BLAST of CsaV3_6G036320 vs. ExPASy TrEMBL
Match: A0A6J1G4W8 (ethylene-responsive transcription factor WRI1-like OS=Cucurbita moschata OX=3662 GN=LOC111450835 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 5.6e-40
Identity = 107/176 (60.80%), Postives = 119/176 (67.61%), Query Frame = 0


Query: 16  TQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPIDYN 75
           TQEEAARAYDIAAIEYRG+NAVTNF+LS+YIRWLK    PNP Q  SPP+S   F ID N
Sbjct: 187 TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLK----PNPMQP-SPPLS---FSIDTN 246

Query: 76  TNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLVEKNIVN 135
           T +                     NN  IPT PQTSPRTALGLLLKSSLFKHL+EKN+VN
Sbjct: 247 TTS---------------------NNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVN 306

Query: 136 VN----EEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFSTL 188
           VN     EE+   +E R LL FV+    NPY +L Y CQGTTNLSLS TPFH+S L
Sbjct: 307 VNGNAEMEEEYSMDEGRALLSFVEP---NPYLHLQYSCQGTTNLSLS-TPFHYSAL 329

[Close]

BLAST of CsaV3_6G036320 vs. ExPASy TrEMBL
Match: K7MRN3 (Uncharacterized protein OS=Glycine max OX=3847 GN=100798483 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.1e-22
Identity = 77/165 (46.67%), Postives = 101/165 (61.21%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSLFPI-- 74
           STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWL+P T+P       P   + LF    
Sbjct: 207 STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGTHPTASHDQKPSTDAQLFATSN 266

Query: 75  DYNTNNTLKSSNNDLH-FPI--FQSINNDD----NNVIIPTNPQTSPRTALGLLLKSSLF 134
              T   ++ SN+++H FP     S    D     N + P N  +SP TALGLLLKSS+F
Sbjct: 267 SMQTRGNIEVSNSNMHSFPSGELDSTKKRDFSKYMNPLSPCNKPSSP-TALGLLLKSSVF 326

Query: 135 KHLVEKNIVNVNEEEDPK-------DNEVRGLLDFVDDSNINPYF 164
           + L+++N+ + +EE D +       ++ V G+ D  +D+  N YF
Sbjct: 327 RELMQRNLNSSSEEADVELKYPQEGNDGVGGIYD--NDNTSNSYF 368

[Close]

BLAST of CsaV3_6G036320 vs. TAIR 10
Match: AT1G16060.2 (ARIA-interacting double AP2 domain protein )

HSP 1 Score: 58.9 bits (141), Expect = 5.0e-09
Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNP---------NPKQQLSPPI 74
           +TQEEAA AYDIAAIEYRG+NAVTNFD+S Y++   P+ NP         +P   LSP I
Sbjct: 122 ATQEEAAIAYDIAAIEYRGLNAVTNFDISRYLKLPVPE-NPIDTANNLLESPHSDLSPFI 181

Query: 75  SSSLFPIDYNTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNP 109
             +    D + + +    N+D    + +S       VI P+ P
Sbjct: 182 KPN-HESDLSQSQSSSEDNDDRKTKLLKSSPLVAEEVIGPSTP 222

[Close]

BLAST of CsaV3_6G036320 vs. TAIR 10
Match: AT1G16060.1 (ARIA-interacting double AP2 domain protein )

HSP 1 Score: 58.9 bits (141), Expect = 5.0e-09
Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNP---------NPKQQLSPPI 74
           +TQEEAA AYDIAAIEYRG+NAVTNFD+S Y++   P+ NP         +P   LSP I
Sbjct: 192 ATQEEAAIAYDIAAIEYRGLNAVTNFDISRYLKLPVPE-NPIDTANNLLESPHSDLSPFI 251

Query: 75  SSSLFPIDYNTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNP 109
             +    D + + +    N+D    + +S       VI P+ P
Sbjct: 252 KPN-HESDLSQSQSSSEDNDDRKTKLLKSSPLVAEEVIGPSTP 292

[Close]

BLAST of CsaV3_6G036320 vs. TAIR 10
Match: AT3G54320.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLK 51
           +TQEEAA AYD+AAIEYRG NAVTNFD+S YI  LK
Sbjct: 199 NTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLK 234

[Close]

BLAST of CsaV3_6G036320 vs. TAIR 10
Match: AT3G54320.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLK 51
           +TQEEAA AYD+AAIEYRG NAVTNFD+S YI  LK
Sbjct: 125 NTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLK 160

[Close]

BLAST of CsaV3_6G036320 vs. TAIR 10
Match: AT3G54320.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLK 51
           +TQEEAA AYD+AAIEYRG NAVTNFD+S YI  LK
Sbjct: 199 NTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLK 234

The following BLAST results are available for this feature:

BLAST of CsaV3_6G036320 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647298.1	1.8e-101	100.00	hypothetical protein Csa_003998 [Cucumis sativus]	[more]
XP_031742891.1	2.4e-93	100.00	AP2-like ethylene-responsive transcription factor At1g79700 [Cucumis sativus]	[more]
XP_008456799.1	4.6e-81	90.56	PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700 [Cucumis ...	[more]
XP_022998979.1	8.8e-40	61.24	ethylene-responsive transcription factor WRI1-like [Cucurbita maxima]	[more]
XP_022946897.1	1.1e-39	60.80	ethylene-responsive transcription factor WRI1-like [Cucurbita moschata]	[more]

BLAST of CsaV3_6G036320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AN4	7.1e-08	40.78	AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thali...	[more]
Q6X5Y6	1.6e-07	77.78	Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
A0JPZ8	2.1e-07	53.62	AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thali...	[more]
Q6PQQ3	1.0e-06	80.65	AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana O...	[more]
Q1PFE1	2.3e-06	77.42	AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana O...	[more]

BLAST of CsaV3_6G036320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ57	1.1e-93	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404260 PE=4 SV=1	[more]
A0A1S3C431	2.2e-81	90.56	AP2-like ethylene-responsive transcription factor At1g79700 OS=Cucumis melo OX=3...	[more]
A0A6J1KFT6	4.3e-40	61.24	ethylene-responsive transcription factor WRI1-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1G4W8	5.6e-40	60.80	ethylene-responsive transcription factor WRI1-like OS=Cucurbita moschata OX=3662...	[more]
K7MRN3	3.1e-22	46.67	Uncharacterized protein OS=Glycine max OX=3847 GN=100798483 PE=4 SV=1	[more]

BLAST of CsaV3_6G036320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16060.2	5.0e-09	40.78	ARIA-interacting double AP2 domain protein	[more]
AT1G16060.1	5.0e-09	40.78	ARIA-interacting double AP2 domain protein	[more]
AT3G54320.1	1.1e-08	77.78	Integrase-type DNA-binding superfamily protein	[more]
AT3G54320.2	1.1e-08	77.78	Integrase-type DNA-binding superfamily protein	[more]
AT3G54320.3	1.1e-08	77.78	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 7..43 e-value: 1.4E-8 score: 36.8
None	No IPR available	PANTHER	PTHR32467:SF116	BINDING PROTEIN, PUTATIVE-RELATED	coord: 15..145
None	No IPR available	PANTHER	PTHR32467	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	coord: 15..145
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 1..41 score: 8.78126
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 16..43

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G036320.1	CsaV3_6G036320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity