CsaV3_6G034380 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G034380
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 19255807 .. 19256090 (+)
RNA-Seq ExpressionCsaV3_6G034380
SyntenyCsaV3_6G034380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGGTGTTCGAATTGCAGGTGACCGACGACGTGGTTCGCGTGTAGAGATGATCAACGTTCGGATTACAGGCGTTCGGGTCTCATTCGCGTGAAGAGTTGGTCGGCGTTCGGATTGTAGGTGAGCAGCATCGTTTGCGTGCAGATTATCGTGGGTGGTTGTTCGCATGGTGGTTCGGATTGTGGATGGCAGCTGGTGAGTGGTGGTTTGGATGGCAGCTGCTGGGTGGTCGATGGCTGGTGGCTGGGCAGCGACTTAAGTGGTGGGGTGGGTGTCCTTTAG

mRNA sequence

ATGGCTGGTGTTCGAATTGCAGGTGACCGACGACGTGGTTCGCGTGTAGAGATGATCAACGTTCGGATTACAGGCGTTCGGGTGAGCAGCATCGTTTGCGTGCAGATTATCGTGGGTGGTTGTTCGCATGGTGGTTCGGATTGTGGATGGCAGCTGGTGAGTGGTGGTTTGGATGGCAGCTGCTGGGTGGTCGATGGCTGGTGGCTGGGCAGCGACTTAAGTGGTGGGGTGGGTGTCCTTTAG

Coding sequence (CDS)

ATGGCTGGTGTTCGAATTGCAGGTGACCGACGACGTGGTTCGCGTGTAGAGATGATCAACGTTCGGATTACAGGCGTTCGGGTGAGCAGCATCGTTTGCGTGCAGATTATCGTGGGTGGTTGTTCGCATGGTGGTTCGGATTGTGGATGGCAGCTGGTGAGTGGTGGTTTGGATGGCAGCTGCTGGGTGGTCGATGGCTGGTGGCTGGGCAGCGACTTAAGTGGTGGGGTGGGTGTCCTTTAG

Protein sequence

MAGVRIAGDRRRGSRVEMINVRITGVRVSSIVCVQIIVGGCSHGGSDCGWQLVSGGLDGSCWVVDGWWLGSDLSGGVGVL*
Homology
[Close]
BLAST of CsaV3_6G034380 vs. NCBI nr
Match: KGN47719.1 (hypothetical protein Csa_018318 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 3.9e-37
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MAGVRIAGDRRRGSRVEMINVRITGVRVSSIVCVQIIVGGCSHGGSDCGWQLVSGGLDGS 60
          MAGVRIAGDRRRGSRVEMINVRITGVRVSSIVCVQIIVGGCSHGGSDCGWQLVSGGLDGS
Sbjct: 1  MAGVRIAGDRRRGSRVEMINVRITGVRVSSIVCVQIIVGGCSHGGSDCGWQLVSGGLDGS 60

Query: 61 CWVVDGWWLGSDLSGGVGVL 81
          CWVVDGWWLGSDLSGGVGVL
Sbjct: 61 CWVVDGWWLGSDLSGGVGVL 80

[Close]
BLAST of CsaV3_6G034380 vs. ExPASy TrEMBL
Match: A0A0A0KFT9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G383560 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-37
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MAGVRIAGDRRRGSRVEMINVRITGVRVSSIVCVQIIVGGCSHGGSDCGWQLVSGGLDGS 60
          MAGVRIAGDRRRGSRVEMINVRITGVRVSSIVCVQIIVGGCSHGGSDCGWQLVSGGLDGS
Sbjct: 1  MAGVRIAGDRRRGSRVEMINVRITGVRVSSIVCVQIIVGGCSHGGSDCGWQLVSGGLDGS 60

Query: 61 CWVVDGWWLGSDLSGGVGVL 81
          CWVVDGWWLGSDLSGGVGVL
Sbjct: 61 CWVVDGWWLGSDLSGGVGVL 80

The following BLAST results are available for this feature:
BLAST of CsaV3_6G034380 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47719.13.9e-37100.00hypothetical protein Csa_018318 [Cucumis sativus][more]
BLAST of CsaV3_6G034380 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G034380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFT91.9e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G383560 PE=4 SV=1[more]
BLAST of CsaV3_6G034380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G034380.1CsaV3_6G034380.1mRNA