CsaV3_6G034320 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCGATAAGCTGCAAGAGAAGGAGGAATAAATTTGTTAAGGATTCAGAAAAGAATTTCAGAGAAGTTTATCCTTGTTCGTTTGTAGATGAAAATAGGAAAGGATTCCTAAGTTTAGAACAAGGTGATGCGACTATGGCAAAGTATGAGAAGAAATTCACCAAACTTGCAAAGCATGTGATGACCTTCGTAGGAGACGAAGAAGATATGTCAAGCGTTTTGAAGGGGCATTAA ATGGATTCGATAAGCTGCAAGAGAAGGAGGAATAAATTTGTTAAGGATTCAGAAAAGAATTTCAGAGAAGTTTATCCTTGTTCGTTTGTAGATGAAAATAGGAAAGGATTCCTAAGTTTAGAACAAGGTGATGCGACTATGGCAAAGTATGAGAAGAAATTCACCAAACTTGCAAAGCATGTGATGACCTTCGTAGGAGACGAAGAAGATATGTCAAGCGTTTTGAAGGGGCATTAA ATGGATTCGATAAGCTGCAAGAGAAGGAGGAATAAATTTGTTAAGGATTCAGAAAAGAATTTCAGAGAAGTTTATCCTTGTTCGTTTGTAGATGAAAATAGGAAAGGATTCCTAAGTTTAGAACAAGGTGATGCGACTATGGCAAAGTATGAGAAGAAATTCACCAAACTTGCAAAGCATGTGATGACCTTCGTAGGAGACGAAGAAGATATGTCAAGCGTTTTGAAGGGGCATTAA MDSISCKRRRNKFVKDSEKNFREVYPCSFVDENRKGFLSLEQGDATMAKYEKKFTKLAKHVMTFVGDEEDMSSVLKGH* Homology
BLAST of CsaV3_6G034320 vs. NCBI nr
Match: KGN47714.1 (hypothetical protein Csa_018314 [Cucumis sativus]) HSP 1 Score: 161.8 bits (408), Expect = 2.5e-36 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of CsaV3_6G034320 vs. NCBI nr
Match: KAA0025975.1 (uncharacterized protein E6C27_scaffold34G002910 [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 2.0e-06 Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of CsaV3_6G034320 vs. NCBI nr
Match: TYK04211.1 (uncharacterized protein E5676_scaffold24967G00130 [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 2.0e-06 Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of CsaV3_6G034320 vs. NCBI nr
Match: KAE8648186.1 (hypothetical protein Csa_018470 [Cucumis sativus]) HSP 1 Score: 61.2 bits (147), Expect = 4.5e-06 Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of CsaV3_6G034320 vs. NCBI nr
Match: TYJ95795.1 (uncharacterized protein E5676_scaffold110G00710 [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 5.9e-06 Identity = 30/61 (49.18%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of CsaV3_6G034320 vs. ExPASy TrEMBL
Match: A0A0A0KFT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G383020 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.2e-36 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of CsaV3_6G034320 vs. ExPASy TrEMBL
Match: A0A5D3BWX9 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24967G00130 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.9e-07 Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of CsaV3_6G034320 vs. ExPASy TrEMBL
Match: A0A5A7SND8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002910 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.9e-07 Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of CsaV3_6G034320 vs. ExPASy TrEMBL
Match: A0A5A7V337 (Aldehyde dehydrogenase family 3 member F1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00080 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.9e-06 Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of CsaV3_6G034320 vs. ExPASy TrEMBL
Match: A0A5A7V5R3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00040 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.9e-06 Identity = 30/61 (49.18%), Postives = 45/61 (73.77%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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