CsaV3_6G034170 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G034170
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	zinc finger CCCH domain-containing protein 1
Location	chr6: 19035932 .. 19042811 (-)
RNA-Seq Expression	CsaV3_6G034170
Synteny	CsaV3_6G034170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATTTTTGACAATTTCCTTGAAAACTTCTACCATCTCGAAGATTTTTAGAATTTCAACTACACTTACCGATGAACACTAAATAGACATCGATAGATGTACTTAACACCTATATTTCCCTTGAATTTTCGGGGTGAGAATATAGTCCGTAGATATAGACTCTTCGGAAATTTTAACTAATCTCCTATCCGTCGAGCCACGGTCTTACACAATCGGGATCGAAACAAAAGGAATGAAAAGAAACACAAAACCCTAATTTCGCCTTTCAGTCAGCGACGTCACTTTTCTCTACCAACATATCCCGGCGGACACCCAGTTCACAAGTAGCTCCGGCGGCGGCGCGGTTCATAGATCCTCGAACGACCACGGGGAGTCCCAGAGCGGCACGATTTCTTGATCTGCATTGACCAGCTATATCTGTACGCCGCGATTCCGAGCCACAACCCTGCACCGACGCCCATTTCGATCATTCAACTTGTTCTTCTTCTTCTTATTCTTCTTCTTTTTTTAAATTCCATTGTAGCATCTATTTATTAATCTAGCTGCTCTTACTCTCGTATACAATGACAGATACAGGCGATACTCAGCCGTCTGAACAAGGTATTAGGGGTTTTTGTTTCGTTCCATTCCTTTTATATATGCATATAGATTTACCTATTTTCATCATGGGTTCTTTGTTTTGTGTCTCCAATTTTTTTCATTGTTGTCGCTCTCTCTAGATACGTTTTTAATCCATTTTTCTTCAGTCTGTAGCTTCTTCAGAAAACCCACCAAAAACAAAAACATCAGGAAGCGGACGGTTGATGAAGACGAAGAGGAGGACTCTAAAGCTGAGACTTCGTTTCTGCTAAATCAGAAGAAAGCCCCTAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGGCCTTCTAAAAATTCATCGTCTAATGAGTCCAATGTGGAACCTAATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGGAAAGGCAAGAGCTCTGGTGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCTAGTGAAAAAGCTGGTGGAGCACATGGGCCGCTTAGAGCTTCTGCTCACATAAGAGCATCGGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCGTGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAGAAGGAATGGGAGGAAGTAGAGAAAGCAAGAAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACAAAGTGATGAAGATGAAGAAGATGCGTTGCCCTTTGCTTGTTTTATTTGTCGCGAGCCTTTTGTGGATCCTGTTGTGACAAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTAAAGGTAGTTGCTCTCTCTTTGTCTTTACTTGTGTCTTAATTATATTGTGATCATGAAGTCATTTCTTCTCTAGGAGATCAAAACGTGCTTCAGAGTTCCTTATATGCTGATGGTTTACCTTCCTCACTAATATATTTATATATACTTGAAATTGAGAAAAAATTTTTTGTTGTGAAAATGAAGAAAAAAAATAATTGTCTGCTTACATACTTTCTCTGCCGTATTTGTTCATTTACATTGACTTACCATAGCATTTTTTCTAAAGTAAACCTATTTATGATGTTTTTTATATTTAGAAATACAATGTTTTTTAAAAAACGAAGGATAATTTTAAAGTAAGAGATAGATTGTTTATTAGAATTATTTTGAAAAATAATTCACCTATTCGACCAGGTCTTACCTGAACAGAATCTATTCTATTTGTTTTGCAACTGTATCCTTGAGTTCGTAAAAATGTCCATCCATTCATGTTGTTGTTCTTGCTCGTTACTGTTGCAGTGACCTATTATTATATTTTCTATAAAGGATTTTCCAACTATGTTAAGTTTTTTCTATAGAACATTATATGTTCCAATTATATTTTGTAATTTAGGGGCCGTTTTGGGGCACCAAAAAGAAGTTGGTAGAGTGGGTTATTATGTTCCAACCCATGTTTGGGGCACCAAATATAATAGTGGTGTATACAAGTATTTATAGCTGTTAAAAGGTAGAAAATAGAACACACAAGGTTTACGTGGAAAACCCTAGAATAGGGAGAAAAAACCACAATTGGGACTTGGCAGTCTTTTATTATTTTCAAAAACAAGGGAAGTTACAAAAGAAGAAAACTTTATAGGCTTTAGCTAGCCCTAATACAAAAAAATAAATAAACTTATGGTAAAGTGAAATAATAAAATACCCTCAGGGCTATAAACTATCTACAAAGCCCATTATTTCCAACATTCTCCCTCAAGTTGGGGGTAGATGTCAATCAAACTCAACATGCTAACACGTGAGTCAAAACTTGACCTGAGTAACCCTTTGGTGAGAACGTCAGCAACTAGTTGACAAGATGAATTCTACATAATACAGATACTTCCACTGTTCCGTTTCTCTTTTATAAGGTGTCCGTCAATCACCACATATTTCGTTCTATCATGTTGTACAAGATTATTGGCTATGCTCATGGTCGCTTTATCATCACAATAGAGATTCGTAGGTAAAACACAGTCTTGGTGAAGATCAGACAAGATTTCTTGAACCAGACTCTTAGCTTTGTATTAAGCTTCAACACTACTTCTAGCAACAACATTTTGCTTCTTACTTCTCCAATTAACTAAGTTACCTCACTCAAAAGTACGATATCCAGAGGTAGATTTTCTGTCAATAATTGATCCTATCCAATCAGAGTCGGTATAAGCATCAATGAATTTACCATTTACTTGGAGAACTTCTCAAATATTTCAGAATCCGATTCATAGCTTCCATATGTTCTTCGTAGGGTGTGTGCATAAATTGACTAACAATACTGACAACATAGGAAATATCTGGTATAGTGTGACATAAGTAATAGAACTTTCACAGGATTTTGTTCTATCATTGTCTAATTCTGCATTGAACTCAATAGGGGTGTCAGCAGATCTACATCCAGTCATACTTGTTTCTTTTAATAGGTCAAGGGTGTATTTCCGTTGTGAGATAGAGATCCCTTCCCTTGATCTTGCCAGCTTCATTTCTAGGAAATATTTTATATTCCTTAGACCATTGATTTCAAATATGTTAGCCATTTTCTTTTTCAGACTGGTGATCTCAGCCGTATCATCTCCTGACAAGACAATATCGTCTACATCGAAAAAGAAGTCTTACCCAAACTCCAATCTCTTCATTGAGAAAGAAGAATGTGCCAGATTTTGACTCTCCTTTTAGTGTGAGGAGTGAGGAAGTCGAACATATGCCAAAGACAGTAGAGAAGGATGACTAGTCGTTGAAGGATCCTTTAGAATATGATCTCAATTTCCTACTTCAAACAGAGGAAGATTTAATTACTGAGACGTAGGCCTCTTTATTACTCTCACAAGCTAAGCACTGAAATTTCAGATCTCTTGAAGTTCATTGTTGAGAAATGTGGAAGTATTTTGGTTTGAGTACAAAATTTAGACTTTATCTTGTTTTTTCATTCATTTATTTTTGAAGTCTTTTAGTGGACCATGAAAGGTTCGACAGATGCTTCTATTATTTTGGCCCTCAAAAGTTCTTGTGAAATATTTCGGTCCTAGTTAGTCACTCAAGATTTAAGGACTATTAGGAGGCATATTTTTTAAACAATACACAACTTGAAGCTGGGTGGTTGTTTGCTCTCCCTTGGTGTTTTCTTCTCAACGATTTTGAAGTTTTTAGTGTGCATTCTTTAGCTATTTTGGGATTCTTGTTGAAAGAATTTTAAGTTTGCTTTGTTCTTAGTAGTTTTCTATTGTTTTGCCCAAGATTGGGCTTTTCATTTGGAGGACGTTTTCTGTCAATGGTTGGTCTACTATGTAACTTTCAACAGTGTTATTTCGTATGCTAGGGTTTCTTGCAATGTTCACACACCGTGATCTGTTTCCCTTTATGCTTGTCACTGTTAGAACCAGATAATTTCGCTCTAAAAGCAGCAGAATCTGTAGCATATACAACATTGACTGTTTCCCTTGAGGCGTACCTTAGAACACAATTCCATAACATAAGTTATAGGCCTTTGTCTCAATATACAGCTTCGTTCTACATCTTGGAGATCAAACCAACTAGGAAATCATAAACACAATCGACATCCTTAATCTTGGAATACTGGACACCTCCACATGGACTATCCCAGATAATTTCACGACATAGATCCATCTCCGGCCAGATTAGGGACAATTTGTTTTAAGTATGAAGTGACATCCATCGTCCCCTGTTTGCACTCATGAGCTTGTTTACATTGAATGTACAGACGAGTGCATTCTATCATTTAGAAAATAATTTTCGAATTGTATCCCAGATATCTTAAGCAGTAGCAACTTACAACAATAGTTTTCCTATCTAAGGTTTCATACTATTAATCGACAGTGGGCGAAGTAATTAGTCTTCTCTTTTCCAAACGCGCTTCTGAGTATCATCTGGTCTAGGTCCTGGTGTCTCACCAATTAGATACCCAAACTTGTGACGCCTCTCAAGGACCATTTTAATTGACTGAGACCAGGAGAAATAATTCTACCATTCAACTTCGCAGTATTTAACCCTGTGAAACTTTCCGAAGAGCCAGACAAATAGTTTGCAGTAGTTAAAGTAGGGAAAGAGGTTACCGGATTCCTTGGATACATCAGTATACCAGAAGTAATGCTATAATTCACTGTACTGGAATATAGGTTTGTGGAATCACCTAGGGCTACCCCAAGAGCAGCGATTTGTTGCTGAAAACTTGTCTGAAGATTAGACAACAAGATTAGCCAACTGTTGTAGTACCATTACCGGGGATAAACCAACGAAGCTTGATGTTCATTACTAGGTGATACATGATGAAGAAGACCTTGTTGCTGCAGCAGGGAATTTACCTTTGTGTTCAACGAATGACTCACTAATCTCGGTTCATGGTGTATATTCTGACTAAGGTTTCCATCAAAGGGTTGCGGCAATGCTAGAATTAGACAGAAGTGCAAGGACTGAAGATAACAATCAACAATGGCTTGGACTGCAGTGGAAAAGTTGGTGGTTTTGACAGCTGCAGCAGCTACGGTTGAAGCAAAACTGGTGCCTAACTAAAGTTATCTTGCACTGGTTGGTTTTTGTCAATGTCGGCTAGGGTTTTTTCACTACTCTCTGATGCCTTGTTGAGAGGTAGAAAAGAGAATACACAAGGTTTACATGGAAAATCCTAGAATAGGGAGAAAAAACCATGGAGTCTTTTTTGTTAAAAGGAAGACAACTTTATAGGCTCTAGCAAGCCCTAATACAAAAAGGGAAATAAACTTAGGGTAAAGTAAAATACTAAAATACCTTGAGGCTATAAACCATCAACAAAGCTCCTTATTTCCAACAATAACCTACAATTAAGTATAATAAATCCTCTTTCAAAACTTTATTTCCTAGCGTGTTGACTATTTATTGTGTATTTACTACTTGTTACTCATCCTCTATTCTTCTCTTGGCAATGGTGTTATTTCCTACCCAAACAAAATTAGTTTACACTCCAAATACAAACTGTTATGATCCAAATTAAAATTGTTGCACCTGAACACTATTATAACCCAACAACTATAATAACCATTGCTTTCAATAACCAACTCAGTGGCCAGCCCCTCAACCACTCCCAAAGTTTTTCCTGGCATGCATTATCGTTAGCAAATGTTAATAGGGAACGCAGTGGCTGAAGTATTTGGATAATTTTTGTAAGTTTGGTGATTGTTTCACTGATGTTGATTTAATATCTTTGCATGTCTAGAGTACATTTCCTTTACTGCAAAACTCAGTATATTTTTTATTTGTATATCTAGGGCATACTTGTAGATGATCATTTCATCCTACATCATCACATACTTCATTTTTTCCCTCTTTTCCTGGTATTTCATGTTACTTATCTTATCTTTAGAATGAATCTAAAATCATTTTTTGTTAATAAAAATTTGCAGCACCATGCAAAGAATAAGAAATGCTTCGTTTGCAACCAGCCTACTCTTGGAATCTTTAACACGGCACATGAGATACGCAAAAGGATGGCACAGAGTAAATAAGTTTTTCTCCCTGATCTGCATTGGTCCCATACCACAGTATTTTGATTTGTAGCATGATTATCTATCTGTATCTTAAAATCAATAACCTGTTGGAGAAGCTTGGATAGTATTTCTTGAAGTATGGCCAATGGGAATGGTCAGTTTTGGAAGTAGTTTTGATGAAAAAAGAAAGACTCTTTCTGTTAAAGTTCATTCTGAATTGGATGATATCTTTTGTAAATAGCCAGAGATACTTCTACTCTACCTGCGTTCCTATAGCTAGAAATTTAAGGTAGATGGTCCGAAGAGATTTTAAAGCTGGACTCTTTATTGAACTTAAAAGTGTTTATATTGTACCCCAGCCTTATCAAATTGTATAATCGAGTATTAGTTTTAGTTTGTCTGTGTTTACTAGTACTCATTTTCACTTTCCAGAGACACAAATATGTGATGAAAAGGAGCCTGCCATAGTGGAACTTTTGTAAAGCATGTGTGGGTATGTGGAAAATGTCTTTGTTCATTATTTTGTACTATTGTCGTTGAAATCCACAGTTATTAGTACGAGCAATCTGAAATAAGAGTAAGGCGAGATACGGATTGGAGA

mRNA sequence

ATGACAGATACAGGCGATACTCAGCCGTCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACCAAAAACAAAAACATCAGGAAGCGGACGGTTGATGAAGACGAAGAGGAGGACTCTAAAGCTGAGACTTCGTTTCTGCTAAATCAGAAGAAAGCCCCTAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGGCCTTCTAAAAATTCATCGTCTAATGAGTCCAATGTGGAACCTAATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGGAAAGGCAAGAGCTCTGGTGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCTAGTGAAAAAGCTGGTGGAGCACATGGGCCGCTTAGAGCTTCTGCTCACATAAGAGCATCGGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCGTGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAGAAGGAATGGGAGGAAGTAGAGAAAGCAAGAAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACAAAGTGATGAAGATGAAGAAGATGCGTTGCCCTTTGCTTGTTTTATTTGTCGCGAGCCTTTTGTGGATCCTGTTGTGACAAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTAAAGCACCATGCAAAGAATAAGAAATGCTTCGTTTGCAACCAGCCTACTCTTGGAATCTTTAACACGGCACATGAGATACGCAAAAGGATGGCACAGAGTAAATAA

Coding sequence (CDS)

ATGACAGATACAGGCGATACTCAGCCGTCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACCAAAAACAAAAACATCAGGAAGCGGACGGTTGATGAAGACGAAGAGGAGGACTCTAAAGCTGAGACTTCGTTTCTGCTAAATCAGAAGAAAGCCCCTAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGGCCTTCTAAAAATTCATCGTCTAATGAGTCCAATGTGGAACCTAATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGGAAAGGCAAGAGCTCTGGTGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCTAGTGAAAAAGCTGGTGGAGCACATGGGCCGCTTAGAGCTTCTGCTCACATAAGAGCATCGGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCGTGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAGAAGGAATGGGAGGAAGTAGAGAAAGCAAGAAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACAAAGTGATGAAGATGAAGAAGATGCGTTGCCCTTTGCTTGTTTTATTTGTCGCGAGCCTTTTGTGGATCCTGTTGTGACAAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTAAAGCACCATGCAAAGAATAAGAAATGCTTCGTTTGCAACCAGCCTACTCTTGGAATCTTTAACACGGCACATGAGATACGCAAAAGGATGGCACAGAGTAAATAA

Protein sequence

MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLYFSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKRMAQSK*

Homology

[Close]

BLAST of CsaV3_6G034170 vs. NCBI nr
Match: XP_004149426.1 (zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypothetical protein Csa_018272 [Cucumis sativus])

HSP 1 Score: 646.4 bits (1666), Expect = 1.3e-181
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKRMAQSK 323
           NQPTLGIFNTAHEIRKRMAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKRMAQSK 322

[Close]

BLAST of CsaV3_6G034170 vs. NCBI nr
Match: XP_008466746.1 (PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo] >XP_008466747.1 PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo])

HSP 1 Score: 636.0 bits (1639), Expect = 1.8e-178
Identity = 317/322 (98.45%), Postives = 319/322 (99.07%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKNS SNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED+SEQSDEDEE ALPFACFICREPFVDPVVTKC HYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKRMAQSK 323
           NQPTLGIFNTAHEIRK+MAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKKMAQSK 322

[Close]

BLAST of CsaV3_6G034170 vs. NCBI nr
Match: XP_038884796.1 (zinc finger CCCH domain-containing protein 1 [Benincasa hispida] >XP_038884797.1 zinc finger CCCH domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 612.8 bits (1579), Expect = 1.7e-171
Identity = 309/320 (96.56%), Postives = 311/320 (97.19%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTG+ QP EQVCSFFRKPTKNKNIRKRTVDED EE SK ETS LLNQKKAPKTESKLY
Sbjct: 1   MTDTGENQPPEQVCSFFRKPTKNKNIRKRTVDED-EEGSKTETSLLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKNS SNES  EPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNES-AEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKRMAQ 321
           NQPTLGIFNTAHEIRK+MAQ
Sbjct: 301 NQPTLGIFNTAHEIRKKMAQ 318

[Close]

BLAST of CsaV3_6G034170 vs. NCBI nr
Match: XP_022958735.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita moschata])

HSP 1 Score: 605.1 bits (1559), Expect = 3.4e-169
Identity = 299/322 (92.86%), Postives = 310/322 (96.27%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTG+ Q  EQVCSFF+KPTKNKNIRKRTVDEDEEE    ETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK++ +NESNVE +KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED +EQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKRMAQSK 323
           NQPTLGIFNTAHEI+K+MA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of CsaV3_6G034170 vs. NCBI nr
Match: XP_023548600.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023548608.1 zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023548618.1 zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >KAG7032517.1 Zinc finger CCCH domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 604.4 bits (1557), Expect = 5.9e-169
Identity = 298/322 (92.55%), Postives = 311/322 (96.58%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTG+ Q  EQVCSFF+KPTKNKNIRKRTVDEDEE+   +ETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSSETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK++ +NESNVE +KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED +EQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKRMAQSK 323
           NQPTLGIFNTAHEI+K+MA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of CsaV3_6G034170 vs. ExPASy Swiss-Prot
Match: Q8GX84 (Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g01350 PE=2 SV=2)

HSP 1 Score: 474.2 bits (1219), Expect = 1.2e-132
Identity = 237/339 (69.91%), Postives = 279/339 (82.30%), Query Frame = 0


Query: 1   MTDTGDTQP----------------SEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKAET 60
           M+D+G+ +P                S+QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+
Sbjct: 1   MSDSGEPKPSQQEEPLPQPAAQETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSES 60

Query: 61  SFLLNQKKAPKTESKLYFSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATL 120
           S L N KK  K +SKLYFSSGPSK+S++      P + +F ++SSKEIQV +DS ATATL
Sbjct: 61  SILQNLKKVAKPDSKLYFSSGPSKSSTTTSG--APERSVFHYDSSKEIQVQNDSGATATL 120

Query: 121 ETETDFSRDARAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSE 180
           ETETDF++DARAIRERVLK+A+EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSE
Sbjct: 121 ETETDFNQDARAIRERVLKKADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSE 180

Query: 181 KAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEK 240
           KAGG+HGPLRASAHIR SARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EK
Sbjct: 181 KAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEK 240

Query: 241 EWEEVEKARKRKLAMKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFC 300
           EWEE EK RKR  AM  +D D++  + SDED E+ALPFACFICREPFVDPVVTKCKHYFC
Sbjct: 241 EWEEAEKVRKRNKAMGVEDEDDEADKDSDED-ENALPFACFICREPFVDPVVTKCKHYFC 300

Query: 301 EHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKRMAQSK 323
           EHCALKHH KNKKCFVCNQPT+GIFN AHEI+KRMA+ +
Sbjct: 301 EHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEER 336

[Close]

BLAST of CsaV3_6G034170 vs. ExPASy Swiss-Prot
Match: Q9FNG6 (Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=At5g06420 PE=2 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 2.7e-132
Identity = 232/321 (72.27%), Postives = 270/321 (84.11%), Query Frame = 0


Query: 3   DTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKAETSFLLNQKKAPKTESKLYF 62
           D  + Q S+QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGPS  +S       P +P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGPSTRTSG-----APERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 302
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALKHH KNKKCFVCN
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 QPTLGIFNTAHEIRKRMAQSK 323
           QPT+GIFN AHEI+KRMA+ +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of CsaV3_6G034170 vs. ExPASy Swiss-Prot
Match: Q6K4V3 (Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0301000 PE=2 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 8.4e-118
Identity = 220/324 (67.90%), Postives = 252/324 (77.78%), Query Frame = 0


Query: 10  SEQVCSFFRKPTKNKNIRKRTV-----DEDEEEDSKAETSFLLNQKKAPKTESKLYFSSG 69
           S  VCSF RKP   KNIRKR       D+D+E+ S A  +     KKAP + SKL+FSS 
Sbjct: 15  SAPVCSFVRKPP--KNIRKRPTAPAGSDDDDEDGSGAIAA--ARAKKAPSSTSKLFFSSA 74

Query: 70  PSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQA 129
                   + + EP +  FQ+ESS+ IQ   DSRATATLETET+F RDARAIRER LKQA
Sbjct: 75  --------DGSSEPRR--FQYESSRTIQASTDSRATATLETETEFDRDARAIRERQLKQA 134

Query: 130 EEALK------GKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHI 189
           EE+LK           SG  ++YKG++ Y DYKAGFRREHT+SSEKAGG+HGPLRASAHI
Sbjct: 135 EESLKKNPSAPASSSGSGSGEVYKGIHGYTDYKAGFRREHTVSSEKAGGSHGPLRASAHI 194

Query: 190 RASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM 249
           R SARFDYQPDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQ+EKEWEE EKARKR++AM
Sbjct: 195 RLSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQIEKEWEEAEKARKRRIAM 254

Query: 250 KSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCF 309
             D  D +  E+ D+D+E+ALPFAC+ICREPFVDPVVTKCKHYFCEHCALKHH+KNKKCF
Sbjct: 255 GGDGSDYEAGEEDDDDDEEALPFACYICREPFVDPVVTKCKHYFCEHCALKHHSKNKKCF 314

Query: 310 VCNQPTLGIFNTAHEIRKRMAQSK 323
           VCN+PTLGIFN A EIRK+MAQ K
Sbjct: 315 VCNKPTLGIFNAAQEIRKKMAQDK 324

[Close]

BLAST of CsaV3_6G034170 vs. ExPASy Swiss-Prot
Match: O15541 (E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.1e-48
Identity = 126/330 (38.18%), Postives = 182/330 (55.15%), Query Frame = 0


Query: 11  EQVCSF-FRKPTKN--KNIRKRTVDEDEEEDS-----------KAETSFLLNQKKAPKTE 70
           +QVC+F F+KP +      RKR   + E  +S           + E   + +     KT 
Sbjct: 12  DQVCTFLFKKPGRKGAAGRRKRPACDPEPGESGSSSDEGCTVVRPEKKRVTHNPMIQKTR 71

Query: 71  SKLYFSSGPSKNSSSNESNVEPNKPIFQFESSKEIQV--HHDSRATATLETETDFSRDAR 130
                 +     SS  E   EP      ++S++  +     D  ATA  E +T+  RDA+
Sbjct: 72  DSGKQKAAYGDLSSEEEEENEPESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQ 131

Query: 131 AIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGG--AHGPL 190
           AI ER  K  EE L+GK      +K+Y+G+N Y  Y    + + T     + G    GP+
Sbjct: 132 AIFERSQKIQEE-LRGK----EDDKIYRGINNYQKY---MKPKDTSMGNASSGMVRKGPI 191

Query: 191 RASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKAR 250
           RA  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E     
Sbjct: 192 RAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDE----- 251

Query: 251 KRKLAMKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHA 310
                 +    +++  E   +DEE  +PF CFICR+ F +PVVTKC+HYFCE CAL+H  
Sbjct: 252 -----GRYGVYEDENYEVGSDDEE--IPFKCFICRQSFQNPVVTKCRHYFCESCALQHFR 311

Query: 311 KNKKCFVCNQPTLGIFNTAHEIRKRMAQSK 323
              +C+VC+Q T G+FN A E+  ++ + +
Sbjct: 312 TTPRCYVCDQQTNGVFNPAKELIAKLEKHR 321

[Close]

BLAST of CsaV3_6G034170 vs. ExPASy Swiss-Prot
Match: Q67ER4 (E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN=RNF113A PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.1e-48
Identity = 125/331 (37.76%), Postives = 185/331 (55.89%), Query Frame = 0


Query: 10  SEQVCSF-FRKPTKN--KNIRKRTVDEDEEEDSKAET----SFLLNQKK---------AP 69
           ++QVC+F F+KP +      RKR +   E  DS + +    + +  +KK           
Sbjct: 11  TDQVCTFLFKKPGRKVAAGRRKRPICNQESGDSSSSSDEGNTVVRPEKKRAVHNPMIQKT 70

Query: 70  KTESKLYFSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDA 129
           +   K   + G   +    E+  E    +++   S +     D  ATA  E +T+  RDA
Sbjct: 71  RGSGKQKVAYGDLSSEEEEENKSESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDA 130

Query: 130 RAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGG--AHGP 189
           +AI ER  K  EE L+G+      +K+Y+G+N   +Y+   + + T     + G    GP
Sbjct: 131 QAIFERSQKIQEE-LRGQ----EDDKIYRGIN---NYQKFMKPKDTSMGNASSGMVRKGP 190

Query: 190 LRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKA 249
           +RA  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E    
Sbjct: 191 IRAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYG 250

Query: 250 RKRKLAMKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHH 309
                       DE+    SDE+E   +PF CFICR+ F +PVVTKC+HYFCE CAL+H 
Sbjct: 251 VYE---------DENYEVGSDEEE---IPFKCFICRQTFQNPVVTKCRHYFCESCALQHF 310

Query: 310 AKNKKCFVCNQPTLGIFNTAHEIRKRMAQSK 323
               +C+VC+Q T G+FN A E+  ++ + +
Sbjct: 311 RTTPRCYVCDQQTNGVFNPAKELIAKLEKHR 321

[Close]

BLAST of CsaV3_6G034170 vs. ExPASy TrEMBL
Match: A0A0A0KFS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 6.5e-182
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKRMAQSK 323
           NQPTLGIFNTAHEIRKRMAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKRMAQSK 322

[Close]

BLAST of CsaV3_6G034170 vs. ExPASy TrEMBL
Match: A0A1S3CS03 (zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103504086 PE=4 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 8.8e-179
Identity = 317/322 (98.45%), Postives = 319/322 (99.07%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKNS SNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED+SEQSDEDEE ALPFACFICREPFVDPVVTKC HYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKRMAQSK 323
           NQPTLGIFNTAHEIRK+MAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKKMAQSK 322

[Close]

BLAST of CsaV3_6G034170 vs. ExPASy TrEMBL
Match: A0A6J1H4B5 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111459918 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.7e-169
Identity = 299/322 (92.86%), Postives = 310/322 (96.27%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTG+ Q  EQVCSFF+KPTKNKNIRKRTVDEDEEE    ETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK++ +NESNVE +KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED +EQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKRMAQSK 323
           NQPTLGIFNTAHEI+K+MA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of CsaV3_6G034170 vs. ExPASy TrEMBL
Match: A0A6J1I9H7 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111470453 PE=4 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 7.0e-168
Identity = 296/322 (91.93%), Postives = 309/322 (95.96%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTG+ Q  EQVCSFF+KPTKNKNIRKRTVDEDEE+    ETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK++ +NESNVE +KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM+S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED +EQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK HAKNKKCFVC
Sbjct: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKRMAQSK 323
           NQPTLGIFNTAHEI+K+MA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of CsaV3_6G034170 vs. ExPASy TrEMBL
Match: A0A6J1BYC6 (zinc finger CCCH domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111006576 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 3.5e-167
Identity = 299/323 (92.57%), Postives = 311/323 (96.28%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTG+ Q  EQVCSFF+KPTKNKNIRKRT+DEDEEEDSK ETS LLNQKKA KTESKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTIDEDEEEDSKTETSLLLNQKKALKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK+S SNESNVE +KPIFQFESSKEIQVHHDS+ATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSSLSNESNVESDKPIFQFESSKEIQVHHDSKATATLETETEFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGE-KLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIR 180
           LKQA+EALKGKGKSSG E KLYKGVNAYVDYKAGFRRE TISSEKAGGAHGPLRASAHIR
Sbjct: 121 LKQADEALKGKGKSSGDEKKLYKGVNAYVDYKAGFRREQTISSEKAGGAHGPLRASAHIR 180

Query: 181 ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMK 240
           ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM 
Sbjct: 181 ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMG 240

Query: 241 SDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFV 300
           SD+GDEDT+EQSDEDEEDALPFACFICREPFVDPV+TKCKHYFCEHCALKHHAKNKKCFV
Sbjct: 241 SDEGDEDTAEQSDEDEEDALPFACFICREPFVDPVMTKCKHYFCEHCALKHHAKNKKCFV 300

Query: 301 CNQPTLGIFNTAHEIRKRMAQSK 323
           CNQPTLGIFNTAHEIRK+MAQSK
Sbjct: 301 CNQPTLGIFNTAHEIRKKMAQSK 323

[Close]

BLAST of CsaV3_6G034170 vs. TAIR 10
Match: AT1G01350.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 474.2 bits (1219), Expect = 8.5e-134
Identity = 237/339 (69.91%), Postives = 279/339 (82.30%), Query Frame = 0


Query: 1   MTDTGDTQP----------------SEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKAET 60
           M+D+G+ +P                S+QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+
Sbjct: 1   MSDSGEPKPSQQEEPLPQPAAQETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSES 60

Query: 61  SFLLNQKKAPKTESKLYFSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATL 120
           S L N KK  K +SKLYFSSGPSK+S++      P + +F ++SSKEIQV +DS ATATL
Sbjct: 61  SILQNLKKVAKPDSKLYFSSGPSKSSTTTSG--APERSVFHYDSSKEIQVQNDSGATATL 120

Query: 121 ETETDFSRDARAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSE 180
           ETETDF++DARAIRERVLK+A+EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSE
Sbjct: 121 ETETDFNQDARAIRERVLKKADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSE 180

Query: 181 KAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEK 240
           KAGG+HGPLRASAHIR SARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EK
Sbjct: 181 KAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEK 240

Query: 241 EWEEVEKARKRKLAMKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFC 300
           EWEE EK RKR  AM  +D D++  + SDED E+ALPFACFICREPFVDPVVTKCKHYFC
Sbjct: 241 EWEEAEKVRKRNKAMGVEDEDDEADKDSDED-ENALPFACFICREPFVDPVVTKCKHYFC 300

Query: 301 EHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKRMAQSK 323
           EHCALKHH KNKKCFVCNQPT+GIFN AHEI+KRMA+ +
Sbjct: 301 EHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEER 336

[Close]

BLAST of CsaV3_6G034170 vs. TAIR 10
Match: AT5G06420.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 473.0 bits (1216), Expect = 1.9e-133
Identity = 232/321 (72.27%), Postives = 270/321 (84.11%), Query Frame = 0


Query: 3   DTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKAETSFLLNQKKAPKTESKLYF 62
           D  + Q S+QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGPS  +S       P +P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGPSTRTSG-----APERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 302
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALKHH KNKKCFVCN
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 QPTLGIFNTAHEIRKRMAQSK 323
           QPT+GIFN AHEI+KRMA+ +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of CsaV3_6G034170 vs. TAIR 10
Match: AT5G06420.2 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 473.0 bits (1216), Expect = 1.9e-133
Identity = 232/321 (72.27%), Postives = 270/321 (84.11%), Query Frame = 0


Query: 3   DTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKAETSFLLNQKKAPKTESKLYF 62
           D  + Q S+QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGPS  +S       P +P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGPSTRTSG-----APERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 302
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALKHH KNKKCFVCN
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 QPTLGIFNTAHEIRKRMAQSK 323
           QPT+GIFN AHEI+KRMA+ +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of CsaV3_6G034170 vs. TAIR 10
Match: AT4G01023.1 (RING/U-box superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 7.2e-24
Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 209 MHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDEDTSEQSDEDEEDALPFACFICRE 268
           + D        +LEK  ++++K   RKL        E     + E+++DALP AC IC+ 
Sbjct: 40  VEDEDSNNESSRLEKLEKKIKKETARKL--------ETDFVLTGEEDDDALPLACSICQN 99

Query: 269 PFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKRMAQSK 323
           PF+DPVVT C HYFC+ CALKHH +N  CFVCN+PTLG+F+TA EI++R+ + +
Sbjct: 100 PFLDPVVTNCNHYFCDKCALKHHTENDTCFVCNEPTLGLFDTAVEIKERIEEER 145

The following BLAST results are available for this feature:

BLAST of CsaV3_6G034170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149426.1	1.3e-181	100.00	zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypot...	[more]
XP_008466746.1	1.8e-178	98.45	PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo] >XP_00846...	[more]
XP_038884796.1	1.7e-171	96.56	zinc finger CCCH domain-containing protein 1 [Benincasa hispida] >XP_038884797.1...	[more]
XP_022958735.1	3.4e-169	92.86	zinc finger CCCH domain-containing protein 1 [Cucurbita moschata]	[more]
XP_023548600.1	5.9e-169	92.55	zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_02...	[more]

BLAST of CsaV3_6G034170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GX84	1.2e-132	69.91	Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FNG6	2.7e-132	72.27	Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6K4V3	8.4e-118	67.90	Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX...	[more]
O15541	3.1e-48	38.18	E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1	[more]
Q67ER4	4.1e-48	37.76	E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN=RNF113A PE=2 SV=1	[more]

BLAST of CsaV3_6G034170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFS0	6.5e-182	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1	[more]
A0A1S3CS03	8.8e-179	98.45	zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A6J1H4B5	1.7e-169	92.86	zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1I9H7	7.0e-168	91.93	zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1BYC6	3.5e-167	92.57	zinc finger CCCH domain-containing protein 1 OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of CsaV3_6G034170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01350.1	8.5e-134	69.91	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.1	1.9e-133	72.27	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.2	1.9e-133	72.27	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT4G01023.1	7.2e-24	45.61	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 263..300 e-value: 8.2E-5 score: 32.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 263..301 score: 10.571388
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 185..212 e-value: 1.8E-7 score: 40.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 186..211 e-value: 6.3E-10 score: 38.7
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 185..213 score: 14.577143
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 261..320 e-value: 9.2E-16 score: 59.2
None	No IPR available	GENE3D	4.10.1000.10		coord: 183..217 e-value: 1.8E-6 score: 29.2
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 262..304 e-value: 5.4E-9 score: 35.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..254
None	No IPR available	PANTHER	PTHR12930:SF9	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 1..322
None	No IPR available	CDD	cd16539	RING-HC_RNF113A_B	coord: 261..301 e-value: 9.81048E-25 score: 92.2935
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 262..306
IPR039971	Pre-mRNA-splicing factor CWC24-like	PANTHER	PTHR12930	ZINC FINGER PROTEIN 183	coord: 1..322
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 278..287
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 184..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G034170.1	CsaV3_6G034170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding