CsaV3_6G034140 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G034140
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionchloroplast processing peptidase-like
Locationchr6: 19007762 .. 19011138 (-)
RNA-Seq ExpressionCsaV3_6G034140
SyntenyCsaV3_6G034140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAATGAAAAAATTTGAAGAATGAAGAACGTAGTCTCATTTGAAGAACAAAATCGTTGTATCAACTCATTTTTTTCTCCACTCCTCACTTTCCCAGAAATTTACACACGAGGTCACTTCCTCCTCTTTCTCTTCCATTTTCTCCAATTTCAATCCAAATTCCATCGGACCTCCTCCATTCTCCACACACATTTCCTCTCTTTCCTCCCATATCTGGAATGACCTTTTTGAGGCCCTTTCTGTTTTACTCTTCGCTGCGATGGATGACTTTTCACAGTTGGGGTTTTCCCAGATGGCCTAGCTTTGACGCTTTCCTTAGATTTCTTGTCCTTTTGATCTTGTGGTCTATGCTTTTGGAGATTCATTCCATTCCTTCCTCATCAATGTATCCAACTCTTCGCGTCGGCGATCGAATTCTTGTCGAGACGGTAATATTTTTCAAGCTGGGTTTTGTATTTATCTGTCGAATTATGTGCTTAATTTTTTTTTTTTTTAAATTTCAGACTTCCACTAGGTTTTAGGGTATTTTTGTGCATGTGATGTGAAAATGGATTGAGATTTTAAGCGTGGTTATGATGAAGCTCGATCGATCGACTGAATCTTCAAAATTATGTGTCAGTTATATCATATTCGAAGAGTATCGGTGAATCATGTGTATTAAAGTATTAACTATGCATTAGTTTACAAAAACGTTGGTAGTTTCTTGTTAGTTCTATTATTATATAAAGAAGAAAGAATCAAACATATAGAAAACAGTATAATCATGAGCAAGACAACGGAATGTGATTTCAGTAATTTAGACAGAAATTATTTTCGTCTTTATAAGTTTTACAAGAGCCTGTCATTTTTTGAACGCGAAAACTCGTTTTTGAATAGTTTGGTCTAAGCTGAGGTAACATAGCTAGGTGAACAAAGTAGAGGGACTTTTGGGGGAATAAGTTTAAACTCTGTTGTATTGATGACCTATGACATTTTGTAACGTCTAAACATTGTCCTATGACATTAGTTGAGACACTCACAGATAACAAAGAAAAAAAAAGGATGGTTAATGTGATTTACATTGACTGTTCTGAAAATTTTCATGTGATCTCTGCTCAAACTAATATCAATGTCCTGGTTGCATTTTCTTCAGGCCTCTTATCTTATCAGAAATCCTTCTATAAATGACATTATAACCTTCCGAGACCCGACACAGGTTAGTTGACAGATGACTAATCTGCATGTCTTTTACTTGAACAGTTTTTCCTAACAGGATCGTGTTGGAATTATGGTGTGCTATAGCAATCTGCACTCAGAGAAGAGAACATTGTTGTAAAGAGAGTTGTTGCCAAAGCCGGAGACACAGTTGAGGTATGGAAGATTGTTGTTATGTTTCTATTGAAAATAACTAGTGATATGAATGTCTAAGACATCAAATTATTATTTATATTTATTTTGATGTAATCTTAGTATTTTTCTATCTTATCCTTTTTATGTTCTATTATTCAGTAGGGGGTATTTTTGTCATTTTACTATGATCAATGACGTGGCATTAGGATTTTCATTAGGCAATTGTGGCCTTTGTGCTTAGTTTAGCTCAGGGAGCTTCTTGAATTTGGTAAGTATTGAATTGCATGCCAAGAACATTCGAGTGGCATTAATCATCCTATCTTGTAGAGCGTTCAAAGCTTGAGCGCAACTTATTCTTGTTCTTGTCTCAAGAGCTTTGATCTTAAGATAATTTGTATCTAACCCAATCCTTAGGGTTGAAATCATATAGATGGAGGGTTCTAATGTATGAGAATTAGGAATTCTGATAGCAAAAGAGTTCCTAATTCTAAGTCACTAGTGTTTTCGTATCAATGGGAGTGACCACTTTTTGTGCACTAATAAATGTACACTTATAGCTACCCTTAAATGGTGACTCTAGTAATAAGAAATTGGGTTTGTTGATGTATCTAAGGTCCAAGCTTTGCCTATACAGAAGATTGTTGCCTGAAATAATTTCGATGAGCTACGAACATAATGCAAGAAATGGGACTCCTCAACAGTCCAGTTATGAAAGAAAATGTATATTGGCAGTTTATGTTTAACTACTTTTCCATTTTATGAGTCACTGACTGCTAAAAACGCCATATCAATTAGCAGGAGAAGAACTTTTAGTGTTGAAGTCAAAGAAACTAACCATTGATGTGGTTTTTATCCAACACCTTTCAGGTTTGTCAGGGGTGCCTCTATGTCAATGGGGTTGCTAAGGATGAAAGCTTCTTACTGGAGCGGCCAATGTACACCACAAAGTCAACTGTGAGTTTTGTTTGAAACTTGACTTTCGTTTTCATTTTTACCGATTCCTCCTACAATTTTCTATTAGAGAGATAAGGCTTTTAAAGCACGTCCTTAGAGATTTTATAGATGAACCGAAATCGTTAAGCAGTCAAGGTGATTTCATAATGCAAAACGAACCCATATTCTTTAGAAATCATCTTCAGACTGTCATTGATTTTCACCACAGCTAAGTCATTGATATTTTGATCAGTCGTTGGAATCAGACTTGAATAATACTGGTTTCCTACGGAATGTGACTTGTAGTTTCAAGTTTGTAGTTAATTTCACTTGTTTGAAACTTGCAGCAAATTCCAGAAGGCCATGTTTACGTGTTGGGCGACAACCGCAACAACAGCTATGACTCCCATATTTGGTTAGTGTTCCTAACTTCATGTTATATTATGCATTTTTGCTGGTTGTCGTTGGTTCTGATTGGGGTCAGGGTGGTTCGGTGTCAGTTTGGAAATATTCCAAATCGACAAATTTAAAAAAATAAAAAATAGAACCGATAGACCTTTACTCCTCAACAGTCAAGGTCGGTTCTAACATTTACTAAACTAACCGTAGTTGGTTTGGTGGCAATGTGGTCGAAAAACCGACTCCAATTGACCTATGCTCACCCATAGTTCTCATGCTGTATAGTTTGCCTCTCCAAAGAAAAAGTCTTTCAACATTTTTGAATTGTATCATTGTTCTTGGAATTGAATGCTCCCCAAGTTTTTATTTCTCTCTCTCAACTTCATCTACGATGTTCTTATAATTCTTGTCACTCACTTGAACAGGGGACCTCTGCCCGTAAAAAACATCATAGGGAGATACCTGTGTTCATGCCATAAACCAACAAGTAAATGATACATTCAACAAATTGAAATGAGGTCAGAAACATTATTCTATTTGTATGTGATAAATTATTTTAGTTCCAAATCTCATGTAGGATTAGGCTTGTTTGGCATGGATGGATATGAATACTAAAGAAACATTTTATTCATTCTTAGGTGTGGTTTATAAATTTGTGTATTAGGTGTGATGGAAGTTAGGGTTACTTTTTTTATTCGTTATCTTTAACAACCATG

mRNA sequence

ATGACCTTTTTGAGGCCCTTTCTGTTTTACTCTTCGCTGCGATGGATGACTTTTCACAGTTGGGGTTTTCCCAGATGGCCTAGCTTTGACGCTTTCCTTAGATTTCTTGTCCTTTTGATCTTGTGGTCTATGCTTTTGGAGATTCATTCCATTCCTTCCTCATCAATGTATCCAACTCTTCGCGTCGGCGATCGAATTCTTGTCGAGACGGCCTCTTATCTTATCAGAAATCCTTCTATAAATGACATTATAACCTTCCGAGACCCGACACAGCAATCTGCACTCAGAGAAGAGAACATTGTTGTAAAGAGAGTTGTTGCCAAAGCCGGAGACACAGTTGAGGTTTGTCAGGGGTGCCTCTATGTCAATGGGGTTGCTAAGGATGAAAGCTTCTTACTGGAGCGGCCAATGTACACCACAAAGTCAACTCAAATTCCAGAAGGCCATGTTTACGTGTTGGGCGACAACCGCAACAACAGCTATGACTCCCATATTTGGGGACCTCTGCCCGTAAAAAACATCATAGGGAGATACCTGTGTTCATGCCATAAACCAACAAGTAAATGA

Coding sequence (CDS)

ATGACCTTTTTGAGGCCCTTTCTGTTTTACTCTTCGCTGCGATGGATGACTTTTCACAGTTGGGGTTTTCCCAGATGGCCTAGCTTTGACGCTTTCCTTAGATTTCTTGTCCTTTTGATCTTGTGGTCTATGCTTTTGGAGATTCATTCCATTCCTTCCTCATCAATGTATCCAACTCTTCGCGTCGGCGATCGAATTCTTGTCGAGACGGCCTCTTATCTTATCAGAAATCCTTCTATAAATGACATTATAACCTTCCGAGACCCGACACAGCAATCTGCACTCAGAGAAGAGAACATTGTTGTAAAGAGAGTTGTTGCCAAAGCCGGAGACACAGTTGAGGTTTGTCAGGGGTGCCTCTATGTCAATGGGGTTGCTAAGGATGAAAGCTTCTTACTGGAGCGGCCAATGTACACCACAAAGTCAACTCAAATTCCAGAAGGCCATGTTTACGTGTTGGGCGACAACCGCAACAACAGCTATGACTCCCATATTTGGGGACCTCTGCCCGTAAAAAACATCATAGGGAGATACCTGTGTTCATGCCATAAACCAACAAGTAAATGA

Protein sequence

MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLCSCHKPTSK*
Homology
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BLAST of CsaV3_6G034140 vs. NCBI nr
Match: XP_004149428.1 (chloroplast processing peptidase [Cucumis sativus] >KGN47696.1 hypothetical protein Csa_018302 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 6.0e-105
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL
Sbjct: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC
Sbjct: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180

Query: 181 SCHKPTSK 189
           SCHKPTSK
Sbjct: 181 SCHKPTSK 188

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BLAST of CsaV3_6G034140 vs. NCBI nr
Match: XP_008466751.1 (PREDICTED: chloroplast processing peptidase-like [Cucumis melo])

HSP 1 Score: 359.4 bits (921), Expect = 1.9e-95
Identity = 170/188 (90.43%), Postives = 177/188 (94.15%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPFLFYSSLRWM FHSWGFPRWP FD FLRF+VLLILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MSFLRPFLFYSSLRWMIFHSWGFPRWPGFDGFLRFIVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVE ASY IRNPSINDIITF+DPTQQS  REENIVVKRVVAKAGDTVEV QGCL
Sbjct: 61  RVGDRILVEKASYFIRNPSINDIITFQDPTQQSGCREENIVVKRVVAKAGDTVEVFQGCL 120

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNG+A+DESFL ERP YTTKSTQIPEGH+YVLGDNRNNSYDSHIWGPLP+KNIIGR LC
Sbjct: 121 YVNGIAQDESFLRERPTYTTKSTQIPEGHIYVLGDNRNNSYDSHIWGPLPIKNIIGRCLC 180

Query: 181 SCHKPTSK 189
           SCHKPTSK
Sbjct: 181 SCHKPTSK 188

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BLAST of CsaV3_6G034140 vs. NCBI nr
Match: XP_038885468.1 (chloroplast processing peptidase-like [Benincasa hispida])

HSP 1 Score: 348.2 bits (892), Expect = 4.4e-92
Identity = 166/187 (88.77%), Postives = 173/187 (92.51%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPFL YSSLRWM   SWGFPR P FD  LRFLV+LILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MSFLRPFLLYSSLRWMNCQSWGFPRLPGFDGLLRFLVVLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVE ASY IRNPSI+DIITFRDPTQQS  REENIVVKRVVAKAGDTVEVCQGCL
Sbjct: 61  RVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL 120

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNG+A+DESFL ERP YTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLP+KNI+GRYLC
Sbjct: 121 YVNGIAQDESFLAERPTYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPIKNILGRYLC 180

Query: 181 SCHKPTS 188
           SCHKPTS
Sbjct: 181 SCHKPTS 187

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BLAST of CsaV3_6G034140 vs. NCBI nr
Match: XP_022141359.1 (chloroplast processing peptidase-like isoform X1 [Momordica charantia])

HSP 1 Score: 331.6 bits (849), Expect = 4.3e-87
Identity = 154/188 (81.91%), Postives = 169/188 (89.89%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           + FLRPF+ YSSLRWMT  SWGFPRWP FD   RFLV+LILWSMLLEIH IPSSSMYPTL
Sbjct: 3   LLFLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTL 62

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVE ASY IRNP+I+DIITFRDPTQQS  REENIVVKRVVA +GD VEVC+GCL
Sbjct: 63  RVGDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCL 122

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNG+A+ E+FL ++P YTTKSTQ+PEGHVYVLGDNRNNSYDSHIWGPLP+KNI+GRYL 
Sbjct: 123 YVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIWGPLPIKNIVGRYLW 182

Query: 181 SCHKPTSK 189
           SCHKPTSK
Sbjct: 183 SCHKPTSK 190

[Close]
BLAST of CsaV3_6G034140 vs. NCBI nr
Match: XP_022991150.1 (chloroplast processing peptidase-like [Cucurbita maxima])

HSP 1 Score: 330.9 bits (847), Expect = 7.3e-87
Identity = 154/188 (81.91%), Postives = 168/188 (89.36%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPF+ YS+LRWMT  SWGFPRWP FD  LR LV+LILWSM LEIH IPSSSMYPTL
Sbjct: 1   MSFLRPFMLYSTLRWMTCSSWGFPRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           R+GDRILVE  SY IRNPSI+DIITFRDPTQQS  REEN+VVKRVVAKAGD VEVC+GCL
Sbjct: 61  RIGDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCL 120

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNG+A+DE FL ERP YTTKSTQ+P+GHVYVLGDNRNNSYDSHIWGPLP+KNIIGRYL 
Sbjct: 121 YVNGIAQDERFLAERPTYTTKSTQVPKGHVYVLGDNRNNSYDSHIWGPLPIKNIIGRYLW 180

Query: 181 SCHKPTSK 189
           SCH PT+K
Sbjct: 181 SCHNPTTK 188

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BLAST of CsaV3_6G034140 vs. ExPASy Swiss-Prot
Match: Q8H0W1 (Chloroplast processing peptidase OS=Arabidopsis thaliana OX=3702 GN=PLSP1 PE=2 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-37
Identity = 80/163 (49.08%), Postives = 102/163 (62.58%), Query Frame = 0 

Query: 23  FPRWPSFDA------FLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIR 82
           FP W  F +      F+   V L     + E   IPS SMYPT  VGDR++ E  SY  R
Sbjct: 104 FPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFR 163

Query: 83  NPSINDIITFRDP--TQQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLE 142
            P  NDI+ F+ P   Q+    + ++ +KR+VAK GD VEV  G L VNGVA++E F+LE
Sbjct: 164 KPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILE 223

Query: 143 RPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGR 178
            P Y     ++PE  V+V+GDNRNNSYDSH+WGPLP+KNIIGR
Sbjct: 224 PPGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGR 266

[Close]
BLAST of CsaV3_6G034140 vs. ExPASy Swiss-Prot
Match: Q9M9Z2 (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP2 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-33
Identity = 74/149 (49.66%), Postives = 95/149 (63.76%), Query Frame = 0 

Query: 31  AFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDP- 90
           AF    V L+  S L E  SIPS+SM PTL VGDR++ E  SY  R P ++DI+ F+ P 
Sbjct: 190 AFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPP 249

Query: 91  -TQQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEG 150
              +      ++ +KR+VA  GD VEVC G L VN   + E F+LE   Y  +   +PEG
Sbjct: 250 ILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEG 309

Query: 151 HVYVLGDNRNNSYDSHIWGPLPVKNIIGR 178
           +V+VLGDNRN S+DSH WGPLP+KNIIGR
Sbjct: 310 YVFVLGDNRNKSFDSHNWGPLPIKNIIGR 338

[Close]
BLAST of CsaV3_6G034140 vs. ExPASy Swiss-Prot
Match: O04348 (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP1 PE=2 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 4.9e-33
Identity = 69/152 (45.39%), Postives = 97/152 (63.82%), Query Frame = 0 

Query: 31  AFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPT 90
           AF    V ++  S L E  SIPS+SMYPTL  GDR++ E  SY  R P ++DI+ F+ P 
Sbjct: 160 AFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPP 219

Query: 91  -----QQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQI 150
                 +      ++ +KR+VA  GD VEV  G L+VN + ++E F+LE   Y  +   +
Sbjct: 220 ILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFV 279

Query: 151 PEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGR 178
           P+G+V+VLGDNRN S+DSH WGPLP++NI+GR
Sbjct: 280 PKGYVFVLGDNRNKSFDSHNWGPLPIENIVGR 311

[Close]
BLAST of CsaV3_6G034140 vs. ExPASy Swiss-Prot
Match: P72660 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB1 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.0e-28
Identity = 65/146 (44.52%), Postives = 86/146 (58.90%), Query Frame = 0 

Query: 36  LVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDP--TQQS 95
           ++ L+L   + E   IPS SM PTL  GDR++VE  SY    P + DII F  P   Q  
Sbjct: 25  VLALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQ 84

Query: 96  ALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVL 155
                   +KRV+A  G TVEV  G +Y +G    E ++LE P Y   + ++P+G V+V+
Sbjct: 85  GYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVM 144

Query: 156 GDNRNNSYDSHIWGPLPVKNIIGRYL 180
           GDNRNNS DSH+WG LP +NIIG  L
Sbjct: 145 GDNRNNSNDSHVWGFLPQQNIIGHAL 170

[Close]
BLAST of CsaV3_6G034140 vs. ExPASy Swiss-Prot
Match: P73157 (Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB2 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.4e-26
Identity = 55/135 (40.74%), Postives = 81/135 (60.00%), Query Frame = 0 

Query: 43  SMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVV 102
           + + E   IPSSSM PTL++ DR+++E  SY +R+P   +I+ F       A    +  +
Sbjct: 40  TFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERGEIVVFNPTDALKAKNFHDAFI 99

Query: 103 KRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYD 162
           KR++   GD V V QG +YVNG   DE+++   P Y     ++P+    VLGDNRNNSYD
Sbjct: 100 KRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYEYGPVKVPDDQYLVLGDNRNNSYD 159

Query: 163 SHIWGPLPVKNIIGR 178
           SH WG +P + ++GR
Sbjct: 160 SHYWGFVPREKLLGR 174

[Close]
BLAST of CsaV3_6G034140 vs. ExPASy TrEMBL
Match: A0A0A0KIU5 (Peptidase_S26 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G382350 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 2.9e-105
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL
Sbjct: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC
Sbjct: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180

Query: 181 SCHKPTSK 189
           SCHKPTSK
Sbjct: 181 SCHKPTSK 188

[Close]
BLAST of CsaV3_6G034140 vs. ExPASy TrEMBL
Match: A0A1S3CRY6 (chloroplast processing peptidase-like OS=Cucumis melo OX=3656 GN=LOC103504090 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 9.3e-96
Identity = 170/188 (90.43%), Postives = 177/188 (94.15%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPFLFYSSLRWM FHSWGFPRWP FD FLRF+VLLILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MSFLRPFLFYSSLRWMIFHSWGFPRWPGFDGFLRFIVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVE ASY IRNPSINDIITF+DPTQQS  REENIVVKRVVAKAGDTVEV QGCL
Sbjct: 61  RVGDRILVEKASYFIRNPSINDIITFQDPTQQSGCREENIVVKRVVAKAGDTVEVFQGCL 120

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNG+A+DESFL ERP YTTKSTQIPEGH+YVLGDNRNNSYDSHIWGPLP+KNIIGR LC
Sbjct: 121 YVNGIAQDESFLRERPTYTTKSTQIPEGHIYVLGDNRNNSYDSHIWGPLPIKNIIGRCLC 180

Query: 181 SCHKPTSK 189
           SCHKPTSK
Sbjct: 181 SCHKPTSK 188

[Close]
BLAST of CsaV3_6G034140 vs. ExPASy TrEMBL
Match: A0A6J1CIF2 (chloroplast processing peptidase-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011778 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.1e-87
Identity = 154/188 (81.91%), Postives = 169/188 (89.89%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           + FLRPF+ YSSLRWMT  SWGFPRWP FD   RFLV+LILWSMLLEIH IPSSSMYPTL
Sbjct: 3   LLFLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTL 62

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVE ASY IRNP+I+DIITFRDPTQQS  REENIVVKRVVA +GD VEVC+GCL
Sbjct: 63  RVGDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCL 122

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNG+A+ E+FL ++P YTTKSTQ+PEGHVYVLGDNRNNSYDSHIWGPLP+KNI+GRYL 
Sbjct: 123 YVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIWGPLPIKNIVGRYLW 182

Query: 181 SCHKPTSK 189
           SCHKPTSK
Sbjct: 183 SCHKPTSK 190

[Close]
BLAST of CsaV3_6G034140 vs. ExPASy TrEMBL
Match: A0A6J1JS29 (chloroplast processing peptidase-like OS=Cucurbita maxima OX=3661 GN=LOC111487833 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.6e-87
Identity = 154/188 (81.91%), Postives = 168/188 (89.36%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPF+ YS+LRWMT  SWGFPRWP FD  LR LV+LILWSM LEIH IPSSSMYPTL
Sbjct: 1   MSFLRPFMLYSTLRWMTCSSWGFPRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           R+GDRILVE  SY IRNPSI+DIITFRDPTQQS  REEN+VVKRVVAKAGD VEVC+GCL
Sbjct: 61  RIGDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCL 120

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNG+A+DE FL ERP YTTKSTQ+P+GHVYVLGDNRNNSYDSHIWGPLP+KNIIGRYL 
Sbjct: 121 YVNGIAQDERFLAERPTYTTKSTQVPKGHVYVLGDNRNNSYDSHIWGPLPIKNIIGRYLW 180

Query: 181 SCHKPTSK 189
           SCH PT+K
Sbjct: 181 SCHNPTTK 188

[Close]
BLAST of CsaV3_6G034140 vs. ExPASy TrEMBL
Match: A0A6J1GPV1 (chloroplast processing peptidase-like OS=Cucurbita moschata OX=3662 GN=LOC111456402 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.6e-87
Identity = 155/188 (82.45%), Postives = 168/188 (89.36%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPF+ YS+LRWMT  SWGFPRWP FD  LR LV+LILWSM LEIH IPSSSMYPTL
Sbjct: 1   MSFLRPFMLYSTLRWMTCLSWGFPRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           R+GDRILVE  SY IRNPSI+DIITFRDPTQQS  REEN+VVKRVVAKAGD VEVC+GCL
Sbjct: 61  RIGDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCL 120

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNGVA+DE FL ERP YTTKSTQ+P+GHVYVLGDNRNNSYDSHIWGPLP+KNIIGRYL 
Sbjct: 121 YVNGVAQDERFLAERPTYTTKSTQVPKGHVYVLGDNRNNSYDSHIWGPLPIKNIIGRYLW 180

Query: 181 SCHKPTSK 189
           SCH PT+K
Sbjct: 181 SCHNPTTK 188

[Close]
BLAST of CsaV3_6G034140 vs. TAIR 10
Match: AT3G24590.1 (plastidic type i signal peptidase 1 )

HSP 1 Score: 157.9 bits (398), Expect = 7.9e-39
Identity = 80/163 (49.08%), Postives = 102/163 (62.58%), Query Frame = 0 

Query: 23  FPRWPSFDA------FLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIR 82
           FP W  F +      F+   V L     + E   IPS SMYPT  VGDR++ E  SY  R
Sbjct: 104 FPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFR 163

Query: 83  NPSINDIITFRDP--TQQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLE 142
            P  NDI+ F+ P   Q+    + ++ +KR+VAK GD VEV  G L VNGVA++E F+LE
Sbjct: 164 KPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILE 223

Query: 143 RPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGR 178
            P Y     ++PE  V+V+GDNRNNSYDSH+WGPLP+KNIIGR
Sbjct: 224 PPGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGR 266

[Close]
BLAST of CsaV3_6G034140 vs. TAIR 10
Match: AT1G06870.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 144.4 bits (363), Expect = 9.1e-35
Identity = 74/149 (49.66%), Postives = 95/149 (63.76%), Query Frame = 0 

Query: 31  AFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDP- 90
           AF    V L+  S L E  SIPS+SM PTL VGDR++ E  SY  R P ++DI+ F+ P 
Sbjct: 190 AFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPP 249

Query: 91  -TQQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEG 150
              +      ++ +KR+VA  GD VEVC G L VN   + E F+LE   Y  +   +PEG
Sbjct: 250 ILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEG 309

Query: 151 HVYVLGDNRNNSYDSHIWGPLPVKNIIGR 178
           +V+VLGDNRN S+DSH WGPLP+KNIIGR
Sbjct: 310 YVFVLGDNRNKSFDSHNWGPLPIKNIIGR 338

[Close]
BLAST of CsaV3_6G034140 vs. TAIR 10
Match: AT2G30440.1 (thylakoid processing peptide )

HSP 1 Score: 142.5 bits (358), Expect = 3.4e-34
Identity = 69/152 (45.39%), Postives = 97/152 (63.82%), Query Frame = 0 

Query: 31  AFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPT 90
           AF    V ++  S L E  SIPS+SMYPTL  GDR++ E  SY  R P ++DI+ F+ P 
Sbjct: 160 AFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPP 219

Query: 91  -----QQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQI 150
                 +      ++ +KR+VA  GD VEV  G L+VN + ++E F+LE   Y  +   +
Sbjct: 220 ILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFV 279

Query: 151 PEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGR 178
           P+G+V+VLGDNRN S+DSH WGPLP++NI+GR
Sbjct: 280 PKGYVFVLGDNRNKSFDSHNWGPLPIENIVGR 311

[Close]
BLAST of CsaV3_6G034140 vs. TAIR 10
Match: AT1G23465.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09
Identity = 43/126 (34.13%), Postives = 60/126 (47.62%), Query Frame = 0 

Query: 55  SMYPTLR-VGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTV 114
           SM PTL   G+ +L E  S   + PS  DI+  R P   +        +KRVV   GD +
Sbjct: 47  SMIPTLHPSGNMLLAERISKRYQKPSRGDIVVIRSPENPN-----KTPIKRVVGVEGDCI 106

Query: 115 EVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKN 174
                   ++ V  DES          ++  +P+GHV+V GD  +NS DS  +GP+P   
Sbjct: 107 S-----FVIDPVKSDES----------QTIVVPKGHVFVQGDYTHNSRDSRNFGPVPYGL 152

Query: 175 IIGRYL 180
           I GR L
Sbjct: 167 IQGRVL 152

[Close]
BLAST of CsaV3_6G034140 vs. TAIR 10
Match: AT1G29960.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-07
Identity = 40/126 (31.75%), Postives = 58/126 (46.03%), Query Frame = 0 

Query: 55  SMYPTLR-VGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTV 114
           SM PTL   G+ +L E  S   + PS  DI+  R P   +        +KRV+   GD +
Sbjct: 47  SMTPTLHPSGNVLLAERISKRYQKPSRGDIVVIRSPENPN-----KTPIKRVIGIEGDCI 106

Query: 115 EVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKN 174
                   ++    DES          ++  +P+GHV+V GD  +NS DS  +G +P   
Sbjct: 107 S-----FVIDSRKSDES----------QTIVVPKGHVFVQGDYTHNSRDSRNFGTVPYGL 152

Query: 175 IIGRYL 180
           I GR L
Sbjct: 167 IQGRVL 152

The following BLAST results are available for this feature:
BLAST of CsaV3_6G034140 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149428.16.0e-105100.00chloroplast processing peptidase [Cucumis sativus] >KGN47696.1 hypothetical prot... [more]
XP_008466751.11.9e-9590.43PREDICTED: chloroplast processing peptidase-like [Cucumis melo][more]
XP_038885468.14.4e-9288.77chloroplast processing peptidase-like [Benincasa hispida][more]
XP_022141359.14.3e-8781.91chloroplast processing peptidase-like isoform X1 [Momordica charantia][more]
XP_022991150.17.3e-8781.91chloroplast processing peptidase-like [Cucurbita maxima][more]
BLAST of CsaV3_6G034140 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8H0W11.1e-3749.08Chloroplast processing peptidase OS=Arabidopsis thaliana OX=3702 GN=PLSP1 PE=2 S... [more]
Q9M9Z21.3e-3349.66Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thalia... [more]
O043484.9e-3345.39Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
P726608.0e-2844.52Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX... [more]
P731573.4e-2640.74Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX... [more]
BLAST of CsaV3_6G034140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIU52.9e-105100.00Peptidase_S26 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G3823... [more]
A0A1S3CRY69.3e-9690.43chloroplast processing peptidase-like OS=Cucumis melo OX=3656 GN=LOC103504090 PE... [more]
A0A6J1CIF22.1e-8781.91chloroplast processing peptidase-like isoform X1 OS=Momordica charantia OX=3673 ... [more]
A0A6J1JS293.6e-8781.91chloroplast processing peptidase-like OS=Cucurbita maxima OX=3661 GN=LOC11148783... [more]
A0A6J1GPV14.6e-8782.45chloroplast processing peptidase-like OS=Cucurbita moschata OX=3662 GN=LOC111456... [more]
BLAST of CsaV3_6G034140 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G24590.17.9e-3949.08plastidic type i signal peptidase 1 [more]
AT1G06870.19.1e-3549.66Peptidase S24/S26A/S26B/S26C family protein [more]
AT2G30440.13.4e-3445.39thylakoid processing peptide [more]
AT1G23465.11.7e-0934.13Peptidase S24/S26A/S26B/S26C family protein [more]
AT1G29960.12.1e-0731.75Peptidase S24/S26A/S26B/S26C family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 145..164
score: 54.17
coord: 44..60
score: 43.98
coord: 101..113
score: 51.28
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 34..179
e-value: 9.2E-37
score: 124.4
IPR000223Peptidase S26A, signal peptidase IPANTHERPTHR43390SIGNAL PEPTIDASE Icoord: 5..187
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 32..178
e-value: 2.8E-37
score: 128.3
IPR019533Peptidase S26CDDcd06530S26_SPase_Icoord: 51..177
e-value: 4.0646E-26
score: 93.8043
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 53..184
e-value: 3.3E-34
score: 119.5
NoneNo IPR availablePANTHERPTHR43390:SF10CHLOROPLAST PROCESSING PEPTIDASE-LIKEcoord: 5..187
IPR019756Peptidase S26A, signal peptidase I, serine active sitePROSITEPS00501SPASE_I_1coord: 53..60
IPR019758Peptidase S26A, signal peptidase I, conserved sitePROSITEPS00761SPASE_I_3coord: 150..163
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 44..179

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G034140.1CsaV3_6G034140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0006465 signal peptide processing
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008236 serine-type peptidase activity