CsaV3_6G033800 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G033800
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Transcription factor CAULIFLOWER
Location	chr6: 18670207 .. 18676422 (+)
RNA-Seq Expression	CsaV3_6G033800
Synteny	CsaV3_6G033800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCCAACTCTCTCCTTTTGAAATCTCTTTCTGTTCTTGGTGATTCTCTTTACAAAATCAATTTTCTTTTCCTTTTGAATACCACAGGCTGTTGTAGTTTTAGGGTTTATTCTTATTTAAAAAAAAAAGAAAAGAAAAAGAAAAAACTATTAATAAAAAAGAATGGGAAGAGGTAGGGTTCAATTGAAAAGGATTGAGAACAAAATAAACAGGCAAGTAACTTTCTCAAAAAGGAAAGCTGGATTACTGAAGAAGGCTCATGAAATCTCTGTTCTTTGTGATGCTGAAGTTGCTTTGATTGTTTTCTCCCACAAAGGAAAACTCTTTGAATACTCCTCTGATTCCAGGTCATCTCTATTTCCTCTTTTCTCTTTTCCTTCTTAATTTCTTCTTTTCATTTCAATCCTTTGGTTATATGAATGTGTTTCTGTTTTTCTTTTTAGTTTTTTTAATAAATAAATTCACATGGCTCCAAATCTAGCTATGTTTCTGATTTTTCTGACTTCTCACTACCACTTAACACCCACTTCTCTTTTCCTTTTTCATCTTAGGGTTTCAAAAATATATACACATATCTGAAACAATAATCGTACCTTACTTAACTTTTGAGTTCAGTGATGATTTGATTCGATTTCTCTATGTATCGTTTTTGTTTTTTAGGGTTTATTTTGATCTACTTCTTTTTAGGTTGAAAAAAACCTAGTCCTTTTTTGGCCATGGAAATGAGGATCTAATTTAACAAATGGAGATATACAGTAGGTTATGGACAGAAATGAAGAGAGTAATTATTGATTGGTAAATGGATTATATATGGTATGAAGAGCCTCATTGATTAAATGATGATGTGAAGAAGAAATAAATTAAATTATTGTACCTTGTAAAATATTGACTTTTATTATTTGATTTTTGAAACTGTTTTTGAATGACTTGTAGTGAAAATTATTTATGTTTTGGAAGGTACTAAATTAAATTCTTCTGAACCTAGGTTGTAAATATCAAAATATATATGAATTAGATTAAAAGTAATGGAGTTGTAAATTATTTAAAATACAGAACACAGGAACCTATAGTAGTTATTTATATATATAATTTGTAAGAAAATATTATTTCATTTGTAAATTATTTCCCTTTTAAATAAAATATTATAATTTTTTTGTTGGGTTTTATAAGTTTTCAATATTTTTCTATGATATTTGAGAGGTAATATTTTTAAAAATAAGGAATCTAGGATTTTCGAAATGATTTTTTTCTTCTTGTTTTTCTTATGTGTATTGAAAGAAAACATCGAACTTAATATATATTTGAAGAAAAGATGTTTATATTCATAATGTGGCTTTCATACGTATAAGCCAAAAACTACATATGACTAATACTTTTTATATTATTGATTTTGGATAATCATTTGACATTTTATATGGATTTTTATTGATAATAATAGATTTTAATCTTCTAAGTCGTATTTGAATTCTTAGAGAAATTCAAAGGACAAAAACAAGTTTTATATTAAAAAATAAAAATTCTTTGGTTTTAAAATTTTGGTTTAATTGTAATAAACAAAGATAAGAAGAAGTGATGCCACTAAAAAAGATAACAAAGTAAACTATAATGTTATTAGAAATTAAAATGTTACTAAACAAAACTTGTAAGCTTTTCTTCCATTTCCAAAGTATTTTTTTATGTGGTCATCGTATATATACACTATTACTCTTCTTCTTCTTCTTCCTTTAAAGTAATTTAACTGATTAAGATATTTATCTTTTCTATAAGTTAAAGGTTTAAATTCCCTAGTTCTAGGTGTGTGTATATATATTTTGTAAAGTTTTTTCTTGGTTTCAATGTTTTCATATATGGCTATTAAAAGCTATTACTTTATAAGTTTATATGCATTTATTTATCACATATTATTGATTGCTTATGATCTCAATCTACATACCTGAATTAGTTTATTTTAAATTTATTTATTTTATATCTAATATTGGTGGGCCTTATTTATATCACATATTAATTGCATTTATTACCTTATATGTATATAAAGCTTATTATTCAAAATCGCTTTCTCTTCTTTTGACCAAAAATCTAGGGTTTATTATGAACAGCAGCAGTGTTCAACATGATAGACAATCGGACAGATAGAAAAAAAAAGTTGAACCCTAGCCCTAAAATGAACGAATGAGTATTCATAATTCATAGTAATACACAGAAGTTGAATATATATATTTTTTATTTTCCAGAAAAAAAGGAAAAGGGTGAAAAAGATAATGGATTTGATGGGAAAGTTGTTATTCTTGTCTAGGATAAGACTTGATAGAAAACAGTAACACTTTGGTGTTTATATGCTTCAAATCTAGGCCCTAACTTTCAAAGTTGATTTTGTTTTTAATATTATTATTCTAAAATAAATTCCTTTTAATTATTTCATATTATATATCTATCTATCTGTGTATATATATATATAATATTTGGCTGTCAATTCAATTTAAATCACTTTGAAATTTCAAACAGTGGTTTGGTTGATGTACTATATTAATGGTTGCTTCTTTTGTGAGAGATACTCAGAGATGGAATTGATAATGAGAGAGATAATTAATTGTGTTGATACTGTTCTAAAGATGTTATATAATTAAAGCTTAATGAACTTTGTTATTTTGTCCATAGTTAGTTCTTGTAATTACACCTTAGTGTTAAAATTCAATCCTCAAACTTAAATTGTACTATTAGTTAATAAAAGTTAAACTCTCTAACTTATATCAGTTGTGATAATCTCTACCATTATGTATAAATTTGAGGGTACGTTTGGTTTTCAAAGCTCAAAATATGATTGTAACCCTCAATGGCTTTTACCATTTGTCTTATTATTATTATTAATATTATTATGTTGTGAAAATTAAATCCTATCATTTTTGTTCTGAGTACATTTGGTGACTTAACATACTTTTAGTTCCAAAGTCATTGTGTTTTTTATGTCAATTATGTGGTTTCATGAATAGTAAAAATATGTATTTGAACTTCTTTTTCTTCTGTCCTCATGATATTGTCATATTGTACTGTCTAATTATTTTCTTAATATATGGGTTGGATTCTGTTTGAGTTATTGTTTATGTCATGTTTGATACACAACTATTTGTTTTTTTTTTTAATTAAAAAGAAAAAAAAACTAAGCCTACTTCCTCCTACTTTTGACCCAATTTTTTTTAAAGTAAAAGATTTCAACTTTTGACCAAATTATAATTTTCTTTTAAAAAAAACAAATAGTAACTATTGGTTAGTTTTTATTTTTTAGAAAACATTATTTAAAAGTGATATTTAGAGGTGGATTAAGTGTTTTTTATAAGCTTGATTTTCAAAAAAATAAGAACTAAAAAAAAATTTGTTACCAAATGAAATCATGATGGAATAGTTTGCAAACTACCCATAGAAATCTTGAAATTTGGAAAAAATATGAAATAGGTCTAATTATATATGTGTAGTAGATAAATTATTTGTGAACAACTTTATGTGCAAATATCCTATCATATATATTAGGCCCTATACTAAAAGGAGTTCTAGTTTTGCATTTGGAAACAATTATTTTTTCTAGGAAAATTTGATCAGTCTCTGTTATTTAATGAGTGACATAGATAATGAACGTCACAAGCCCCTTTGGAGATATCCGATAAAATTGGAACTATACAGAGATAATGAACGTCACAGTAAAGTTAAAATATCCACTTTTAGGTTTAGTTAGTATCCGTTATTTCAACATAATTACCAGTGTTATCATTTGTGTATTCAATAATTATATCAAGAAGCTTAATTAATTATACATTACTATGAACTTTAATTATGGTACAGCATGGAGAAAATACTTGAACGGTATGAGAGATATTCTTTTGTGGGAAGGCAACAAAATGCAGCTTCTGAATCTGAATTTTCTTATGAAAATTGGACTCTTGAATACTACAGACTCAAGTCCAAAGTCGAACTTCTACAACGAAACAACAGGTATGTCTATGATTAAACTAACGTTTTAAATGTCATTGATATCGATAGATAGTCTTTTGATAATATTATTAAACTGAAAATAACGATGCATGATTGTCTTAAATCTTTTTGTTTTGAATTTGTTACTTGAGGATTCAAACAATCTCATATGAAAGTTCGATACACAGTTGACCTAGGGCGCGTTATTATTATTTTTTTTCTCCCTTTACCTTGTAGACATAGTTAATAGTAAACAACGTAAATCTCTATTTGTTGATTCACTATTATTTTACGTTCTTACTGCCTGTTCATATGTGTCACAAGTTGATCATAGCATTGATGTATGATATTAACGTGTCGTCTGACAAAAAGTTAATAACCTCAGGTATATTTGTTTGTTTTGTAATTGCAGTCATTATATGGGAGAAGATTTGGATTCGTTGAGTGTCAAAGAACTGCAAAACTTGGAACAACAAATTGACACTGCACTTAAACATGTTCGAACCAGAAAAGTAGGGTTCTTTCTCCTAACGTTTTATAAATATTTGTGATTTATTATTGATTAATTATAAGTTTCTATTGGATTATTTTTCAGAACCAACTTATGTTTGAGTCCATCACTGACCTCCAAAAAAAGGCAAATACTCTTCACTTTTCCCATTTTTTAAATCTTAAATAGAACTTAAGTTCTTTTCCGTTGTTTATTTACTAACTGCAATTGTTATGAATAATAACTAAGTATATAACCCTTTATATTCACAAATTTTATTATATTTACATTTTTTTAAATGTATAATTGCTATATTTGCAACTATCTTTTGTTTAATTTGCATCTAAATATATATATATTTTAATCTTACGTAAATGTCAGGTAAGAAATATAGAGGAGAACAATGTCCAACTGGCTAAGCAGGTGAGTTTTGCTTACATTTTAATTTAATCACATTTTCAATTCTTAAAACGATTTTTGTACCGGCCATAGGGACAAGAGTCGTGCCCCGATGAGTCCGAGGGCACATTGGTCACTGCAATTCCTTGGGTGTGAACCCAGACAAAGTGGTGGTAGTAACAAATATACCAAAATCTTAAAACACATATATATTTCAAATAAAAATATAGTCATCCTAAAATCGAGTAGGAAGTATTATGTTAAAGTTGTCGAAACAGGAAACTGTGTTTAGAGTAATGCATCATGTTATTTGTTTTGAGTTAACATAGGATGTTGTATGTTAATTTTTGATCTAACCCACTAAAAAGTGAAAAAGATTAAACATAATTATTATTAAGTGAAATATATATATATATATAGATAAAGGAGAAAGAGAAGAGTGTAGCATTGGCACAACAAGCAGAATGGGAGCACCAGCAACAGCAGGGTTACAATGCTTTGTCTTTCTTATTCCCACCACCTCCTCATCCCTCTCTAAACATTGGGTAATATAATTCATCCACAATATTATTTGTTTATTGTTTCTATTTTGTTAAATTGTGAAAGAAAAAAAATTCAGAGAAGCCTTTCAACAATTAGTGTTTCATACCGTAATTAAATTACAGATTTCCTATGACTAAAACAAAGTTTATAATTTAGTTCTTATCATACACCTAACTCACATGACTATACCTGAGAAATCCTGATTATGGACTACAGGGACCGGTCCAAATGCATAATTTAACTAAAAATAAACTCTAGACGCTCTATACTAACATTACATGTATCACATTTTCTTTGCATTGTTTGAATCAATGTTAGGCTTGCAAGTTTTGATGGTCACCAATGAAACTTGTTACACGTCGGCAACGATCGGATAAGTACAGGAAATGTGTGTGGCAGAAGAAGAAGAAGAAGAAGAGGAGGTGGGAGGATGTAGTTACTTAATAATGGGAAAATGGAACTAGTTAATACCCTATAAGTGTAATGCTTTGACAACTTAATTATATATGAAGGGGGGTTTCTGGGCTTTTGTTAAATTGACAAAGAAAACATTTGAACTTTGCTGTGTTTGGAGGATTTCTACTAAAAACTTGAGTGTAATCAGATTGCTAATATACTACTGAAATGGAGTTGTTTTGTTCCCTATAGCTAAGAAAACTGCTTATTATTTCTCTAAAAGCTAGTGCTTTTTAGGGTTCAGTCATTTGTTGTTATAGTTTGATAAATTTATGGAGATATACTATGTAGGGTTATTTATTAGGGTTTTGTAAAGCTTTGGATTTGGATATTAATTATAATTTGAACCATGGTTTTCATCATTTAA

mRNA sequence

ATGGGAAGAGGTAGGGTTCAATTGAAAAGGATTGAGAACAAAATAAACAGGCAAGTAACTTTCTCAAAAAGGAAAGCTGGATTACTGAAGAAGGCTCATGAAATCTCTGTTCTTTGTGATGCTGAAGTTGCTTTGATTGTTTTCTCCCACAAAGGAAAACTCTTTGAATACTCCTCTGATTCCAGCATGGAGAAAATACTTGAACGGTATGAGAGATATTCTTTTGTGGGAAGGCAACAAAATGCAGCTTCTGAATCTGAATTTTCTTATGAAAATTGGACTCTTGAATACTACAGACTCAAGTCCAAAGTCGAACTTCTACAACGAAACAACAGTCATTATATGGGAGAAGATTTGGATTCGTTGAGTGTCAAAGAACTGCAAAACTTGGAACAACAAATTGACACTGCACTTAAACATGTTCGAACCAGAAAAAACCAACTTATGTTTGAGTCCATCACTGACCTCCAAAAAAAGGTAAGAAATATAGAGGAGAACAATGTCCAACTGGCTAAGCAGATAAAGGAGAAAGAGAAGAGTGTAGCATTGGCACAACAAGCAGAATGGGAGCACCAGCAACAGCAGGGTTACAATGCTTTGTCTTTCTTATTCCCACCACCTCCTCATCCCTCTCTAAACATTGGGCTTGCAAGTTTTGATGGTCACCAATGA

Coding sequence (CDS)

ATGGGAAGAGGTAGGGTTCAATTGAAAAGGATTGAGAACAAAATAAACAGGCAAGTAACTTTCTCAAAAAGGAAAGCTGGATTACTGAAGAAGGCTCATGAAATCTCTGTTCTTTGTGATGCTGAAGTTGCTTTGATTGTTTTCTCCCACAAAGGAAAACTCTTTGAATACTCCTCTGATTCCAGCATGGAGAAAATACTTGAACGGTATGAGAGATATTCTTTTGTGGGAAGGCAACAAAATGCAGCTTCTGAATCTGAATTTTCTTATGAAAATTGGACTCTTGAATACTACAGACTCAAGTCCAAAGTCGAACTTCTACAACGAAACAACAGTCATTATATGGGAGAAGATTTGGATTCGTTGAGTGTCAAAGAACTGCAAAACTTGGAACAACAAATTGACACTGCACTTAAACATGTTCGAACCAGAAAAAACCAACTTATGTTTGAGTCCATCACTGACCTCCAAAAAAAGGTAAGAAATATAGAGGAGAACAATGTCCAACTGGCTAAGCAGATAAAGGAGAAAGAGAAGAGTGTAGCATTGGCACAACAAGCAGAATGGGAGCACCAGCAACAGCAGGGTTACAATGCTTTGTCTTTCTTATTCCCACCACCTCCTCATCCCTCTCTAAACATTGGGCTTGCAAGTTTTGATGGTCACCAATGA

Protein sequence

MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ*

Homology

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BLAST of CsaV3_6G033800 vs. NCBI nr
Match: XP_004144163.1 (truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sativus] >KAE8647256.1 hypothetical protein Csa_018276 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 3.1e-116
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 224
           VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ
Sbjct: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 223

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BLAST of CsaV3_6G033800 vs. NCBI nr
Match: XP_008445435.1 (PREDICTED: truncated transcription factor CAULIFLOWER A [Cucumis melo])

HSP 1 Score: 411.0 bits (1055), Expect = 6.6e-111
Identity = 213/223 (95.52%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYSFVGRQQNAASES FS+ENWTLEYYRLKSKVELLQRNNSHY+GEDLD
Sbjct: 61  SSMEKILERYERYSFVGRQQNAASESHFSHENWTLEYYRLKSKVELLQRNNSHYVGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVR+RKNQLMFESITDLQKKVR IEENN QLAK+IKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRSRKNQLMFESITDLQKKVRTIEENNAQLAKEIKEKEKS 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 224
           VALAQQAEWEHQQ  GY+ALSFLFPPPPHPSLNIGLASFDGHQ
Sbjct: 181 VALAQQAEWEHQQHHGYSALSFLFPPPPHPSLNIGLASFDGHQ 223

[Close]

BLAST of CsaV3_6G033800 vs. NCBI nr
Match: XP_031742602.1 (truncated transcription factor CAULIFLOWER A isoform X2 [Cucumis sativus])

HSP 1 Score: 394.8 bits (1013), Expect = 4.9e-106
Identity = 209/223 (93.72%), Postives = 209/223 (93.72%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKK              IKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKK--------------IKEKEKS 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 224
           VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ
Sbjct: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 209

[Close]

BLAST of CsaV3_6G033800 vs. NCBI nr
Match: XP_038886329.1 (truncated transcription factor CAULIFLOWER A-like [Benincasa hispida])

HSP 1 Score: 384.4 bits (986), Expect = 6.6e-103
Identity = 201/223 (90.13%), Postives = 211/223 (94.62%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYS+VGRQQ AASESEFS+ENWTLEYYRLKSKVELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSYVGRQQIAASESEFSHENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVR+RKNQLM++SI+ LQ+K R I+E N  LAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRSRKNQLMYDSISALQRKERAIQEQNALLAKQIKEKEKS 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 224
           VA+AQQAEWE QQ  GYNALSFLFP  PHPSLNIGLASFDGH+
Sbjct: 181 VAMAQQAEWEQQQHHGYNALSFLFPSAPHPSLNIGLASFDGHE 223

[Close]

BLAST of CsaV3_6G033800 vs. NCBI nr
Match: XP_022951531.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata] >XP_023537553.1 truncated transcription factor CAULIFLOWER A-like [Cucurbita pepo subsp. pepo] >KAG6585254.1 Agamous-like MADS-box protein AP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020176.1 Floral homeotic protein APETALA 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101
Identity = 200/222 (90.09%), Postives = 209/222 (94.14%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYS+VGRQQ AA+ESEFS ENWTLEYYRLKS+VELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVR+RKNQLM +SI+ LQ+K R I+E N  LAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKEKEKS 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGH 223
           VA+AQQAEWE QQQ GYNALSFLFP  PHPSLNIGLASFDGH
Sbjct: 181 VAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 222

[Close]

BLAST of CsaV3_6G033800 vs. ExPASy Swiss-Prot
Match: Q6E6S7 (Agamous-like MADS-box protein AP1 OS=Vitis vinifera OX=29760 GN=AP1 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-71
Identity = 151/215 (70.23%), Postives = 176/215 (81.86%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+ GLLKKAHEISVLCDAEVALIVFS KGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           S MEKIL+RYERYS+  RQ  A      S  NW+LEY +LK+K+ELLQR+  H++GEDLD
Sbjct: 61  SCMEKILDRYERYSYAERQLTATDPE--SQGNWSLEYSKLKAKIELLQRSQRHFLGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           SLS+KELQNLEQQ+DTALKH+R+RKNQLM+ESI++LQ+K + ++E N  LAK+IKEKEK+
Sbjct: 121 SLSLKELQNLEQQLDTALKHIRSRKNQLMYESISELQRKEKAMQEQNNMLAKEIKEKEKT 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIG 216
           V  AQQ  WE QQ  G N  SFL  P   P LN+G
Sbjct: 181 V--AQQTHWE-QQNHGLNTSSFLL-PQQLPCLNMG 209

[Close]

BLAST of CsaV3_6G033800 vs. ExPASy Swiss-Prot
Match: D7KWY6 (Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=AP1 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.1e-71
Identity = 148/210 (70.48%), Postives = 176/210 (83.81%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVAL+VFSHKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           S MEKILERYERYS+  RQ   A ES+ +  NW++EY RLK+K+ELL+RN  HY+GEDL+
Sbjct: 61  SCMEKILERYERYSYAERQL-IAPESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLN 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           ++S KELQNLEQQ+DTALKH+RTRKNQLM+ESI +LQ+K + I+E N  L+KQIKE+EK 
Sbjct: 121 AMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQRKEKAIQEQNSMLSKQIKEREK- 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHP 211
           +  AQQ +W+ QQ  G+N      PPPP P
Sbjct: 181 ILRAQQEQWD-QQNHGHN-----MPPPPPP 201

[Close]

BLAST of CsaV3_6G033800 vs. ExPASy Swiss-Prot
Match: P35631 (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana OX=3702 GN=AP1 PE=1 SV=2)

HSP 1 Score: 268.9 bits (686), Expect = 5.3e-71
Identity = 149/210 (70.95%), Postives = 175/210 (83.33%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVAL+VFSHKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           S MEKILERYERYS+  RQ   A ES+ +  NW++EY RLK+K+ELL+RN  HY+GEDL 
Sbjct: 61  SCMEKILERYERYSYAERQL-IAPESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQ 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           ++S KELQNLEQQ+DTALKH+RTRKNQLM+ESI +LQKK + I+E N  L+KQIKE+EK 
Sbjct: 121 AMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREK- 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHP 211
           +  AQQ +W+ QQ QG+N       PPP P
Sbjct: 181 ILRAQQEQWD-QQNQGHNM------PPPLP 200

[Close]

BLAST of CsaV3_6G033800 vs. ExPASy Swiss-Prot
Match: A2IB53 (Floral homeotic protein APETALA 1 OS=Citrus sinensis OX=2711 GN=AP1 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.9e-70
Identity = 149/210 (70.95%), Postives = 173/210 (82.38%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVAL+VFSHKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           S MEKILERYERYS+  RQ   A ES+ +  NW++EY RLK+K+ELL+RN  HY+GEDL 
Sbjct: 61  SCMEKILERYERYSYAERQL-IAPESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQ 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           ++S KELQNLEQQ+DTALKH+RTRKNQLM+ESI +LQKK + I+E N  L KQIKE+EK 
Sbjct: 121 AMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLFKQIKEREK- 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHP 211
           +  AQQ +W+ QQ QG N       PPP P
Sbjct: 181 IFRAQQEQWD-QQNQGPNM------PPPLP 200

[Close]

BLAST of CsaV3_6G033800 vs. ExPASy Swiss-Prot
Match: Q96355 (Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var. italica OX=36774 GN=1AP1 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.7e-70
Identity = 145/208 (69.71%), Postives = 174/208 (83.65%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+AGL KKAHEISVLCDAEVAL+VFSHKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           S MEKILERYERYS+  RQ   A ES+ +  NW++EY RLK+K+ELL+RN  HY+GEDL 
Sbjct: 61  SCMEKILERYERYSYAERQL-IAPESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQ 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           ++S KELQNLEQQ+DTALKH+R+RKNQLM++S+ +LQ+K + I+E N  L+KQIKE+EK 
Sbjct: 121 AMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREK- 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPP 209
           V +AQQ +W+ QQ  G N  S   PPPP
Sbjct: 181 VLMAQQEQWD-QQNHGQNMPS---PPPP 201

[Close]

BLAST of CsaV3_6G033800 vs. ExPASy TrEMBL
Match: A0A1S3BCQ3 (truncated transcription factor CAULIFLOWER A OS=Cucumis melo OX=3656 GN=LOC103488455 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.2e-111
Identity = 213/223 (95.52%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYSFVGRQQNAASES FS+ENWTLEYYRLKSKVELLQRNNSHY+GEDLD
Sbjct: 61  SSMEKILERYERYSFVGRQQNAASESHFSHENWTLEYYRLKSKVELLQRNNSHYVGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVR+RKNQLMFESITDLQKKVR IEENN QLAK+IKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRSRKNQLMFESITDLQKKVRTIEENNAQLAKEIKEKEKS 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 224
           VALAQQAEWEHQQ  GY+ALSFLFPPPPHPSLNIGLASFDGHQ
Sbjct: 181 VALAQQAEWEHQQHHGYSALSFLFPPPPHPSLNIGLASFDGHQ 223

[Close]

BLAST of CsaV3_6G033800 vs. ExPASy TrEMBL
Match: A0A6J1GHU4 (truncated transcription factor CAULIFLOWER A-like OS=Cucurbita moschata OX=3662 GN=LOC111454319 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.1e-102
Identity = 200/222 (90.09%), Postives = 209/222 (94.14%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYS+VGRQQ AA+ESEFS ENWTLEYYRLKS+VELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVR+RKNQLM +SI+ LQ+K R I+E N  LAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKEKEKS 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGH 223
           VA+AQQAEWE QQQ GYNALSFLFP  PHPSLNIGLASFDGH
Sbjct: 181 VAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 222

[Close]

BLAST of CsaV3_6G033800 vs. ExPASy TrEMBL
Match: A0A6J1KPM9 (truncated transcription factor CAULIFLOWER A-like OS=Cucurbita maxima OX=3661 GN=LOC111496100 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 199/222 (89.64%), Postives = 208/222 (93.69%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYS+VGRQQ AA+ESEFS ENWTLEYYRLKS+VELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVR+RKNQLM +SI+ LQ+K R I+E N  LAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKEKEKS 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGH 223
            A+AQQAEWE QQQ GYNALSFLFP  PHPSLNIGLASFDGH
Sbjct: 181 AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 222

[Close]

BLAST of CsaV3_6G033800 vs. ExPASy TrEMBL
Match: A0A6J1BSN0 (truncated transcription factor CAULIFLOWER A-like OS=Momordica charantia OX=3673 GN=LOC111004981 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.7e-101
Identity = 197/225 (87.56%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALI+FSHKGKLFEY++D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALILFSHKGKLFEYATD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYS+VGRQQ A SE+EFS ENWTLEYYRLKSKVELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSYVGRQQIALSETEFSQENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKH+R+RKNQLM++SI+ LQ+K R I+E N  LAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHIRSRKNQLMYDSISALQRKERAIQEQNALLAKQIKEKEKS 180

Query: 181 VALAQQAEWEHQQQQ--GYNALSFLFPPPPHPSLNIGLASFDGHQ 224
           VA+AQQAEWEHQQQQ  GY+ALSFLFP PPHPSLNIGLASF+G+Q
Sbjct: 181 VAMAQQAEWEHQQQQHHGYSALSFLFPTPPHPSLNIGLASFEGNQ 225

[Close]

BLAST of CsaV3_6G033800 vs. ExPASy TrEMBL
Match: A0A0A0KGY7 (K-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G367090 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 9.1e-82
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 63  MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 122
           MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL
Sbjct: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60

Query: 123 SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 182
           SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA
Sbjct: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120

Query: 183 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 224
           LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ
Sbjct: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 161

[Close]

BLAST of CsaV3_6G033800 vs. TAIR 10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 268.9 bits (686), Expect = 3.8e-72
Identity = 149/210 (70.95%), Postives = 175/210 (83.33%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVAL+VFSHKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           S MEKILERYERYS+  RQ   A ES+ +  NW++EY RLK+K+ELL+RN  HY+GEDL 
Sbjct: 61  SCMEKILERYERYSYAERQL-IAPESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQ 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           ++S KELQNLEQQ+DTALKH+RTRKNQLM+ESI +LQKK + I+E N  L+KQIKE+EK 
Sbjct: 121 AMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREK- 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHP 211
           +  AQQ +W+ QQ QG+N       PPP P
Sbjct: 181 ILRAQQEQWD-QQNQGHNM------PPPLP 200

[Close]

BLAST of CsaV3_6G033800 vs. TAIR 10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 238.8 bits (608), Expect = 4.2e-63
Identity = 124/185 (67.03%), Postives = 152/185 (82.16%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRV+LKRIENKINRQVTFSKR+ GLLKKA EISVLCDAEV+LIVFSHKGKLFEYSS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           S MEK+LERYERYS+  RQ  A      +  NW++EY RLK+K+ELL+RN  HY+GE+L+
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
            +S+K+LQNLEQQ++TALKH+R+RKNQLM ES+  LQ+K + I+E N  L KQIKE+E  
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180

Query: 181 VALAQ 186
           +   Q
Sbjct: 181 LRTKQ 185

[Close]

BLAST of CsaV3_6G033800 vs. TAIR 10
Match: AT5G60910.1 (AGAMOUS-like 8 )

HSP 1 Score: 224.9 bits (572), Expect = 6.3e-59
Identity = 127/205 (61.95%), Postives = 161/205 (78.54%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR++GLLKKAHEISVLCDAEVALIVFS KGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           S ME+ILERY+RY +  +Q      S+   ENW LE+ +LK++VE+L++N  ++MGEDLD
Sbjct: 61  SCMERILERYDRYLYSDKQLVGRDVSQ--SENWVLEHAKLKARVEVLEKNKRNFMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180
           SLS+KELQ+LE Q+D A+K +R+RKNQ MFESI+ LQKK + ++++N  L K+IKE+EK 
Sbjct: 121 SLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREK- 180

Query: 181 VALAQQAEWEHQQQQGYNALSFLFP 206
               +  + E Q  Q  N+ S L P
Sbjct: 181 ----KTGQQEGQLVQCSNSSSVLLP 198

[Close]

BLAST of CsaV3_6G033800 vs. TAIR 10
Match: AT3G30260.1 (AGAMOUS-like 79 )

HSP 1 Score: 183.0 bits (463), Expect = 2.7e-46
Identity = 104/178 (58.43%), Postives = 134/178 (75.28%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQL+RIENKI RQVTFSKR+ GL+KKA EISVLCDAEVALIVFS KGKLFEYS+ 
Sbjct: 1   MGRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAG 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           SSME+IL+RYER ++ G  Q+  + +  S    + E  +L   +++LQR+  H  GE++D
Sbjct: 61  SSMERILDRYERSAYAG--QDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKE 179
            LS+++LQ +E Q+DTALK  R+RKNQLM ESI  LQKK + ++E   QL K+  E+E
Sbjct: 121 GLSIRDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKKEKELKELKKQLTKKAGERE 176

[Close]

BLAST of CsaV3_6G033800 vs. TAIR 10
Match: AT1G24260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 169.1 bits (427), Expect = 4.1e-42
Identity = 102/225 (45.33%), Postives = 143/225 (63.56%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRV+LKRIENKINRQVTF+KR+ GLLKKA+E+SVLCDAEVALI+FS++GKL+E+ S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120
           SSM + LERY++ ++   + N  S    +  +   EY +LK + + LQR   + +GEDL 
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAELSSQQEYLKLKERYDALQRTQRNLLGEDLG 120

Query: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENN----------VQL 180
            LS KEL++LE+Q+D++LK +R  + Q M + + DLQ K R + E N           Q+
Sbjct: 121 PLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQM 180

Query: 181 AKQIKEKEKSVALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIG 216
             Q+   ++ V         HQQQQ  ++ +F  P    P L IG
Sbjct: 181 PLQLNPNQEEV--DHYGRHHHQQQQ--HSQAFFQPLECEPILQIG 221

The following BLAST results are available for this feature:

BLAST of CsaV3_6G033800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144163.1	3.1e-116	100.00	truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sativus] >KAE86...	[more]
XP_008445435.1	6.6e-111	95.52	PREDICTED: truncated transcription factor CAULIFLOWER A [Cucumis melo]	[more]
XP_031742602.1	4.9e-106	93.72	truncated transcription factor CAULIFLOWER A isoform X2 [Cucumis sativus]	[more]
XP_038886329.1	6.6e-103	90.13	truncated transcription factor CAULIFLOWER A-like [Benincasa hispida]	[more]
XP_022951531.1	1.3e-101	90.09	truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata] >XP_02353...	[more]

BLAST of CsaV3_6G033800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6E6S7	1.4e-71	70.23	Agamous-like MADS-box protein AP1 OS=Vitis vinifera OX=29760 GN=AP1 PE=2 SV=1	[more]
D7KWY6	3.1e-71	70.48	Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 G...	[more]
P35631	5.3e-71	70.95	Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana OX=3702 GN=AP1 PE=1 SV...	[more]
A2IB53	5.9e-70	70.95	Floral homeotic protein APETALA 1 OS=Citrus sinensis OX=2711 GN=AP1 PE=2 SV=1	[more]
Q96355	7.7e-70	69.71	Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var. italica OX=36774 G...	[more]

BLAST of CsaV3_6G033800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BCQ3	3.2e-111	95.52	truncated transcription factor CAULIFLOWER A OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A6J1GHU4	6.1e-102	90.09	truncated transcription factor CAULIFLOWER A-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1KPM9	1.8e-101	89.64	truncated transcription factor CAULIFLOWER A-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1BSN0	8.7e-101	87.56	truncated transcription factor CAULIFLOWER A-like OS=Momordica charantia OX=3673...	[more]
A0A0A0KGY7	9.1e-82	100.00	K-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G367090 PE=4 ...	[more]

BLAST of CsaV3_6G033800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69120.1	3.8e-72	70.95	K-box region and MADS-box transcription factor family protein	[more]
AT1G26310.1	4.2e-63	67.03	K-box region and MADS-box transcription factor family protein	[more]
AT5G60910.1	6.3e-59	61.95	AGAMOUS-like 8	[more]
AT3G30260.1	2.7e-46	58.43	AGAMOUS-like 79	[more]
AT1G24260.1	4.1e-42	45.33	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 153..187
None	No IPR available	COILS	Coil	Coil	coord: 127..147
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..215
None	No IPR available	PANTHER	PTHR48019:SF79	TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A	coord: 1..215
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 73.71 coord: 38..59 score: 65.42 coord: 3..23 score: 70.24
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.1E-40 score: 151.2
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.3E-25 score: 88.6
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 32.085411
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..86 e-value: 7.5E-28 score: 98.2
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..89
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 86..174 e-value: 1.2E-28 score: 99.1
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 90..180 score: 16.755291
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..74 e-value: 1.80499E-43 score: 138.839

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G033800.1	CsaV3_6G033800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding