CsaV3_6G032300 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G032300
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 18297981 .. 18298333 (-)
RNA-Seq ExpressionCsaV3_6G032300
SyntenyCsaV3_6G032300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGAAACGGAGGTGGGAGTCGATGGCGATCGGTGCTGGAGAGTGGTGAGTGGTGAGTGGAGTGGTGGTCGTGAAAGAAAAGGGCGAGAGGGTCAAATCAAAATTGGAGGAAGGGGTTAGGTGGGGGCTTAGTTGAAATTGACGGCGTATGGCGTGAAATGTATAATGGCAACGGTGGAGGGGCCCATTTGGACGGAATAATTGTAGCGACCGCCATTGATGGAGCTTGCTACGGCTTTTCTCAAGGCCCCATTACTGTGATAGGAACAATACGCCTTCAACCCATTCCTCTTCTTCAACATTATTATGAATCTCTACCTCTTTCCACAATTGGTGATGAGATGAGATGA

mRNA sequence

ATGACGGAAACGGAGGTGGGAGTCGATGGCGATCGGTGCTGGAGAGTGGTGAGTGTTGAAATTGACGGCGTATGGCGTGAAATGTATAATGGCAACGGTGGAGGGGCCCATTTGGACGGAATAATTGTAGCGACCGCCATTGATGGAGCTTGCTACGGCTTTTCTCAAGGCCCCATTACTGTGATAGGAACAATACGCCTTCAACCCATTCCTCTTCTTCAACATTATTATGAATCTCTACCTCTTTCCACAATTGGTGATGAGATGAGATGA

Coding sequence (CDS)

ATGACGGAAACGGAGGTGGGAGTCGATGGCGATCGGTGCTGGAGAGTGGTGAGTGTTGAAATTGACGGCGTATGGCGTGAAATGTATAATGGCAACGGTGGAGGGGCCCATTTGGACGGAATAATTGTAGCGACCGCCATTGATGGAGCTTGCTACGGCTTTTCTCAAGGCCCCATTACTGTGATAGGAACAATACGCCTTCAACCCATTCCTCTTCTTCAACATTATTATGAATCTCTACCTCTTTCCACAATTGGTGATGAGATGAGATGA

Protein sequence

MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPITVIGTIRLQPIPLLQHYYESLPLSTIGDEMR*
Homology
[Close]
BLAST of CsaV3_6G032300 vs. NCBI nr
Match: KGN47619.1 (hypothetical protein Csa_018964 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 6.7e-46
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPIT 60
          MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPIT
Sbjct: 1  MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPIT 60

Query: 61 VIGTIRLQPIPLLQHYYESLPLSTIGDEMR 91
          VIGTIRLQPIPLLQHYYESLPLSTIGDEMR
Sbjct: 61 VIGTIRLQPIPLLQHYYESLPLSTIGDEMR 90

[Close]
BLAST of CsaV3_6G032300 vs. ExPASy TrEMBL
Match: A0A0A0KFK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G365190 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.3e-46
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPIT 60
          MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPIT
Sbjct: 1  MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPIT 60

Query: 61 VIGTIRLQPIPLLQHYYESLPLSTIGDEMR 91
          VIGTIRLQPIPLLQHYYESLPLSTIGDEMR
Sbjct: 61 VIGTIRLQPIPLLQHYYESLPLSTIGDEMR 90

The following BLAST results are available for this feature:
BLAST of CsaV3_6G032300 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47619.16.7e-46100.00hypothetical protein Csa_018964 [Cucumis sativus][more]
BLAST of CsaV3_6G032300 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G032300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFK93.3e-46100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G365190 PE=4 SV=1[more]
BLAST of CsaV3_6G032300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G032300.1CsaV3_6G032300.1mRNA