CsaV3_6G031180 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G031180
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr6: 17404053 .. 17405401 (-)
RNA-Seq ExpressionCsaV3_6G031180
SyntenyCsaV3_6G031180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGCAGGGTATATTCATTCCTCTCAATGGGAGGAGGCATTAGAATTTGTCCACTTGATGCGCAGTTCGATTAAGGATATTGATCGTACAACTCTTTGCTTGATATTAAATGTATGTACTGGCAGTTCTGATGTTGAAAGAGGAAAGCAAGTTCATGGTTTTGTCTATAGAACTGGTTTCTATGCTAATCTCTATATTGGCAATGCCCTCCTTGATATGTATGGTAAATGCGGGAACTTGAAAAGTGCAAAAGTTTGGTTCTACCAAATGAGTCAATGGCGAGATAAAGTTTCCTGGAATGCTCTGCTCACCGCACATGCTCGTCATGGTATGAGTGAACAGGCTATGACAATTTTTTCAGAGATGCAATTGGAAACAGATCCTAATAATTTTACCTTTGCAACTCTTTTAGGAGCATGTGCAAACATGTTTGCGTTAGAGCATGGTAAACAAATCCATGGCTTCATGGTTAGAAATAATTATGCGATAGACATCGTACTTACCGGAGCATTAGTTGATATGTACTGCAAATGCCGGGAACTTAAGTATGCTCTCAAGGTTTTTGAACATGTGGCCTCACGCGATGTGGTTTTGTGGAACTCCATTATCTTAGGATGTTGCCACAACAGAAGGGATATGTTAGCAATCAAACTATTTCAATTAATGACGATGGAGGAAGGCATTAAACCAGACCATGTGACCTTCCAAGGTATTTTGCTCGCTTGTTTGCATGAAAATCTCGTTGAGTTAGGTAGGAAGTATTTCGATTCAATGAGTGAAAAGTTCTGTGTCATACCTCGATTAGAACACTATGAATGCATGGTCGAGCTCTATGGCCAACATGGAAACATGGATGAGCTTGAAAAATTTATCAACAATATGCCCTTTGATCCCACTGTTCCAATGCTGGAAAGAATCTTCAATGCATGTAGAGAACATGGACACTCGAGGTTGGCAGAATGGGTAGCTATACGACTAAATGAGCAAAACTTTCCAAAGTAAAATCATTGAAGCAACAAAATCTATCCAGCTGGCATGGTTCAAAAACACTGAAAAGTTCTCTCTCATTCATTCTATAATCTAAATTTTTTGGCTACCTGCTTGATGCATCAGCAATCAAAGAGAAATTTAGATCCAAGAGCTGAATGATAAGAGAACAAGATGTTATTTCTCATTCCAGTATCAAGTGTTCGCTCTGGGCCATTGAAGAGCAGTTCATGTTCAAGCGCTTGGTGAGTAGAAACCAGAATCTTGATCTGCGCAACCTGTTGATTGTTATAATCCCCTTCAAGTCAAGTCATTCACAAACTAAGCTGTCAATGCGAGTCCATAAGGGTGTATTGTGA

mRNA sequence

ATGCTGGCAGGGTATATTCATTCCTCTCAATGGGAGGAGGCATTAGAATTTGTCCACTTGATGCGCAGTTCGATTAAGGATATTGATCGTACAACTCTTTGCTTGATATTAAATGTATGTACTGGCAGTTCTGATGTTGAAAGAGGAAAGCAAGTTCATGGTTTTGTCTATAGAACTGGTTTCTATGCTAATCTCTATATTGGCAATGCCCTCCTTGATATGTATGGTAAATGCGGGAACTTGAAAAGTGCAAAAGTTTGGTTCTACCAAATGAGTCAATGGCGAGATAAAGTTTCCTGGAATGCTCTGCTCACCGCACATGCTCGTCATGGTATGAGTGAACAGGCTATGACAATTTTTTCAGAGATGCAATTGGAAACAGATCCTAATAATTTTACCTTTGCAACTCTTTTAGGAGCATGTGCAAACATGTTTGCGTTAGAGCATGGTAAACAAATCCATGGCTTCATGGTTAGAAATAATTATGCGATAGACATCGTACTTACCGGAGCATTAGTTGATATGTACTGCAAATGCCGGGAACTTAAGTATGCTCTCAAGGTTTTTGAACATGTGGCCTCACGCGATGTGGTTTTGTGGAACTCCATTATCTTAGGATGTTGCCACAACAGAAGGGATATGTTAGCAATCAAACTATTTCAATTAATGACGATGGAGGAAGGCATTAAACCAGACCATGTGACCTTCCAAGGTATTTTGCTCGCTTGTTTGCATGAAAATCTCGTTGAGTTAGGTAGGAAGTATTTCGATTCAATGAGTGAAAAGTTCTGTGTCATACCTCGATTAGAACACTATGAATGCATGGTCGAGCTCTATGGCCAACATGGAAACATGGATGAGCTTGAAAAATTTATCAACAATATGCCCTTTGATCCCACTGTTCCAATGCTGGAAAGAATCTTCAATGCATGTAGAGAACATGGACACTCGAGGTTGGCAGAATGGGTAGCTATACGACTAAATGAGCAAAACTTTCCAAATATCAAGTGTTCGCTCTGGGCCATTGAAGAGCAGTTCATGTTCAAGCGCTTGGTGAGTAGAAACCAGAATCTTGATCTGCGCAACCTGTTGATTGTTATAATCCCCTTCAAGTCAAGTCATTCACAAACTAAGCTGTCAATGCGAGTCCATAAGGGTGTATTGTGA

Coding sequence (CDS)

ATGCTGGCAGGGTATATTCATTCCTCTCAATGGGAGGAGGCATTAGAATTTGTCCACTTGATGCGCAGTTCGATTAAGGATATTGATCGTACAACTCTTTGCTTGATATTAAATGTATGTACTGGCAGTTCTGATGTTGAAAGAGGAAAGCAAGTTCATGGTTTTGTCTATAGAACTGGTTTCTATGCTAATCTCTATATTGGCAATGCCCTCCTTGATATGTATGGTAAATGCGGGAACTTGAAAAGTGCAAAAGTTTGGTTCTACCAAATGAGTCAATGGCGAGATAAAGTTTCCTGGAATGCTCTGCTCACCGCACATGCTCGTCATGGTATGAGTGAACAGGCTATGACAATTTTTTCAGAGATGCAATTGGAAACAGATCCTAATAATTTTACCTTTGCAACTCTTTTAGGAGCATGTGCAAACATGTTTGCGTTAGAGCATGGTAAACAAATCCATGGCTTCATGGTTAGAAATAATTATGCGATAGACATCGTACTTACCGGAGCATTAGTTGATATGTACTGCAAATGCCGGGAACTTAAGTATGCTCTCAAGGTTTTTGAACATGTGGCCTCACGCGATGTGGTTTTGTGGAACTCCATTATCTTAGGATGTTGCCACAACAGAAGGGATATGTTAGCAATCAAACTATTTCAATTAATGACGATGGAGGAAGGCATTAAACCAGACCATGTGACCTTCCAAGGTATTTTGCTCGCTTGTTTGCATGAAAATCTCGTTGAGTTAGGTAGGAAGTATTTCGATTCAATGAGTGAAAAGTTCTGTGTCATACCTCGATTAGAACACTATGAATGCATGGTCGAGCTCTATGGCCAACATGGAAACATGGATGAGCTTGAAAAATTTATCAACAATATGCCCTTTGATCCCACTGTTCCAATGCTGGAAAGAATCTTCAATGCATGTAGAGAACATGGACACTCGAGGTTGGCAGAATGGGTAGCTATACGACTAAATGAGCAAAACTTTCCAAATATCAAGTGTTCGCTCTGGGCCATTGAAGAGCAGTTCATGTTCAAGCGCTTGGTGAGTAGAAACCAGAATCTTGATCTGCGCAACCTGTTGATTGTTATAATCCCCTTCAAGTCAAGTCATTCACAAACTAAGCTGTCAATGCGAGTCCATAAGGGTGTATTGTGA

Protein sequence

MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIFSEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCRELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGILLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPTVPMLERIFNACREHGHSRLAEWVAIRLNEQNFPNIKCSLWAIEEQFMFKRLVSRNQNLDLRNLLIVIIPFKSSHSQTKLSMRVHKGVL*
Homology
BLAST of CsaV3_6G031180 vs. NCBI nr
Match: KGN47720.2 (hypothetical protein Csa_018993 [Cucumis sativus])

HSP 1 Score: 810.4 bits (2092), Expect = 6.5e-231
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG
Sbjct: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF
Sbjct: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120

Query: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180
           SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR
Sbjct: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180

Query: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240
           ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL
Sbjct: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240

Query: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300
           LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT
Sbjct: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300

Query: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQNFPNIKCSLWAIEEQFMFKRLVSRNQNLDL 360
           VPMLERIFNACREHGHSRLAEWVAIRLNEQNFPNIKCSLWAIEEQFMFKRLVSRNQNLDL
Sbjct: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQNFPNIKCSLWAIEEQFMFKRLVSRNQNLDL 360

Query: 361 RNLLIVIIPFKSSHSQTKLSMRVHKGVL 389
           RNLLIVIIPFKSSHSQTKLSMRVHKGVL
Sbjct: 361 RNLLIVIIPFKSSHSQTKLSMRVHKGVL 388

BLAST of CsaV3_6G031180 vs. NCBI nr
Match: XP_004144297.1 (pentatricopeptide repeat-containing protein At3g26540 [Cucumis sativus])

HSP 1 Score: 702.2 bits (1811), Expect = 2.5e-198
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG
Sbjct: 364 MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 423

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF
Sbjct: 424 FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 483

Query: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180
           SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR
Sbjct: 484 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 543

Query: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240
           ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL
Sbjct: 544 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 603

Query: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300
           LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT
Sbjct: 604 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 663

Query: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQNFP 334
           VPMLERIFNACREHGHSRLAEWVAIRLNEQNFP
Sbjct: 664 VPMLERIFNACREHGHSRLAEWVAIRLNEQNFP 696

BLAST of CsaV3_6G031180 vs. NCBI nr
Match: XP_008441583.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g26540 [Cucumis melo] >TYK23784.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 681.0 bits (1756), Expect = 6.0e-192
Identity = 320/333 (96.10%), Postives = 328/333 (98.50%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTG SDVERGKQVHGFVYRTG
Sbjct: 364 MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGISDVERGKQVHGFVYRTG 423

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTA+ARHGMSEQAMT F
Sbjct: 424 FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAYARHGMSEQAMTSF 483

Query: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180
           SEMQLETDPN+FTFATLLGACANMFALE GKQIHGFMVRNNYAIDIVLTGALVDMYCKCR
Sbjct: 484 SEMQLETDPNSFTFATLLGACANMFALEQGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 543

Query: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240
           EL+YALKVFEHVASRDVVLWNSIILGCCHNRRDMLAI+LFQ MTMEEGIKPDHVTFQG+L
Sbjct: 544 ELEYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIELFQSMTMEEGIKPDHVTFQGVL 603

Query: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300
           LACLHENL+ELGRKYFDSMSEKFC+IPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT
Sbjct: 604 LACLHENLIELGRKYFDSMSEKFCIIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 663

Query: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQNFP 334
           VPMLERIFNACREHGHS LAEWVA+RLNEQNFP
Sbjct: 664 VPMLERIFNACREHGHSSLAEWVAVRLNEQNFP 696

BLAST of CsaV3_6G031180 vs. NCBI nr
Match: KAG7016451.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 635.6 bits (1638), Expect = 2.9e-178
Identity = 295/371 (79.51%), Postives = 331/371 (89.22%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           MLAGYIHS QW+EAL+FVHLM +SIKD+D  TL LILNVCTG  DVERGKQVHGF+YR G
Sbjct: 364 MLAGYIHSGQWKEALDFVHLMHNSIKDVDHVTLRLILNVCTGLLDVERGKQVHGFIYRIG 423

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           FYANLYIGNALLDMYGKCGNLKSA+VWFYQMSQWRDKVSWNALLT +ARHGMSEQAMTIF
Sbjct: 424 FYANLYIGNALLDMYGKCGNLKSARVWFYQMSQWRDKVSWNALLTTYARHGMSEQAMTIF 483

Query: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180
           SEMQ E  P+ FTFATLL ACAN FAL+ GKQIHGFMVRNNY ID+ ++GALVDMYCKCR
Sbjct: 484 SEMQWEAAPSKFTFATLLAACANTFALDQGKQIHGFMVRNNYEIDVAVSGALVDMYCKCR 543

Query: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240
           +L+YALKVFE+ ASRDVVLWNSIILGCCHNRR M+ I+LF++M ME+GI PDHVTFQGIL
Sbjct: 544 QLEYALKVFENAASRDVVLWNSIILGCCHNRRGMIVIELFEMMMMEKGINPDHVTFQGIL 603

Query: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300
           LAC++ENLVELGR+YFDSM +KFC+IPRLEHYEC++ELYG+HGNMDELEKFINNMPFDPT
Sbjct: 604 LACVYENLVELGRQYFDSMIDKFCIIPRLEHYECVIELYGRHGNMDELEKFINNMPFDPT 663

Query: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQNFPNIKCSLWAIEEQFMFKRLVSRNQNLDL 360
           VPMLE++ +ACR+HGHSRL EWVAIRLNEQN   IKCSL  IE+Q MFK  V R Q+L+L
Sbjct: 664 VPMLEKVLDACRKHGHSRLGEWVAIRLNEQNLYKIKCSLQPIEKQCMFKSSVRRIQDLNL 723

Query: 361 RNLLIVIIPFK 372
            N+L V IP K
Sbjct: 724 PNMLTVTIPIK 734

BLAST of CsaV3_6G031180 vs. NCBI nr
Match: XP_038884263.1 (pentatricopeptide repeat-containing protein At3g26540 [Benincasa hispida])

HSP 1 Score: 620.2 bits (1598), Expect = 1.2e-173
Identity = 289/332 (87.05%), Postives = 310/332 (93.37%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           MLAGYI+S QWEEALEFVHLM SSIK++D  TL LILN CTG  DVERGKQVHGFVYR G
Sbjct: 364 MLAGYINSRQWEEALEFVHLMHSSIKEVDHITLRLILNACTGLLDVERGKQVHGFVYRIG 423

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           FYANL+IGNALLDMYGKCGNLKSA+VWFYQMSQWRDKVSWNALLT +ARHG+SEQAMTIF
Sbjct: 424 FYANLFIGNALLDMYGKCGNLKSARVWFYQMSQWRDKVSWNALLTTYARHGLSEQAMTIF 483

Query: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180
           SEMQ ET P+ FTFATLLGACAN FALE GKQIHGFMVRNNY IDIV++GALVDMYCKCR
Sbjct: 484 SEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCR 543

Query: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240
           +L YALKVFEHVASRDVVLWNSIILGCCHNRR M+ IKLFQLMTM EGIKPDHVTFQGIL
Sbjct: 544 QLDYALKVFEHVASRDVVLWNSIILGCCHNRRGMIVIKLFQLMTMVEGIKPDHVTFQGIL 603

Query: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300
           LAC+HENLVELGR+YFDSMSEKFC+IPRLEHYECM+ELYG+HGNMDEL+KFINNMPFDPT
Sbjct: 604 LACVHENLVELGRQYFDSMSEKFCIIPRLEHYECMIELYGRHGNMDELQKFINNMPFDPT 663

Query: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQNF 333
           VPMLERI +ACR+HGHSRLAEWV IRLN+QNF
Sbjct: 664 VPMLERILDACRKHGHSRLAEWVTIRLNKQNF 695

BLAST of CsaV3_6G031180 vs. ExPASy Swiss-Prot
Match: Q9LRV2 (Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-A5 PE=2 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 5.9e-110
Identity = 184/332 (55.42%), Postives = 244/332 (73.49%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           ML GY+H+ +W+EAL+F+ LMR  I++ID  TL  ILNVC+G SDV+ GKQ HGF+YR G
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHG 425

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           +  N+ + NALLDMYGKCG L+SA +WF QMS+ RD+VSWNALLT  AR G SEQA++ F
Sbjct: 426 YDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF 485

Query: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180
             MQ+E  P+ +T ATLL  CAN+ AL  GK IHGF++R+ Y ID+V+ GA+VDMY KCR
Sbjct: 486 EGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCR 545

Query: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240
              YA++VF+  A+RD++LWNSII GCC N R     +LF L+   EG+KPDHVTF GIL
Sbjct: 546 CFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLE-NEGVKPDHVTFLGIL 605

Query: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300
            AC+ E  VELG +YF SMS K+ + P++EHY+CM+ELY ++G + +LE+F+  MPFDP 
Sbjct: 606 QACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPP 665

Query: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQNF 333
           + ML RI +AC+ +  S+L  W A RL   ++
Sbjct: 666 MQMLTRINDACQRYRWSKLGAWAAKRLMNDHY 696

BLAST of CsaV3_6G031180 vs. ExPASy Swiss-Prot
Match: Q9CAA8 (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-57
Identity = 110/330 (33.33%), Postives = 186/330 (56.36%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           M+ G   +   +EA+E    M+     +D+     +L  C G   +  GKQ+H  + RT 
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           F  ++Y+G+AL+DMY KC  L  AK  F +M Q ++ VSW A++  + + G +E+A+ IF
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ-KNVVSWTAMVVGYGQTGRAEEAVKIF 360

Query: 121 SEMQLE-TDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKC 180
            +MQ    DP+++T    + ACAN+ +LE G Q HG  + +     + ++ +LV +Y KC
Sbjct: 361 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 420

Query: 181 RELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGI 240
            ++  + ++F  +  RD V W +++       R +  I+LF  M ++ G+KPD VT  G+
Sbjct: 421 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM-VQHGLKPDGVTLTGV 480

Query: 241 LLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDP 300
           + AC    LVE G++YF  M+ ++ ++P + HY CM++L+ + G ++E  +FIN MPF P
Sbjct: 481 ISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPP 540

Query: 301 TVPMLERIFNACREHGHSRLAEWVAIRLNE 330
                  + +ACR  G+  + +W A  L E
Sbjct: 541 DAIGWTTLLSACRNKGNLEIGKWAAESLIE 568

BLAST of CsaV3_6G031180 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.8e-56
Identity = 114/347 (32.85%), Postives = 201/347 (57.93%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           ++AGY  S  +E+AL  V  M ++    D  TL  +L + +   DV +GK++HG+V R G
Sbjct: 213 IIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG 272

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
             +++YIG++L+DMY K   ++ ++  F ++   RD +SWN+L+  + ++G   +A+ +F
Sbjct: 273 IDSDVYIGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVAGYVQNGRYNEALRLF 332

Query: 121 SEM-QLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKC 180
            +M   +  P    F++++ ACA++  L  GKQ+HG+++R  +  +I +  ALVDMY KC
Sbjct: 333 RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC 392

Query: 181 RELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGI 240
             +K A K+F+ +   D V W +II+G   +     A+ LF+ M   +G+KP+ V F  +
Sbjct: 393 GNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM-KRQGVKPNQVAFVAV 452

Query: 241 LLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDP 300
           L AC H  LV+    YF+SM++ + +   LEHY  + +L G+ G ++E   FI+ M  +P
Sbjct: 453 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEP 512

Query: 301 TVPMLERIFNACREHGHSRLAEWVAIRLNEQNFPN-----IKCSLWA 342
           T  +   + ++C  H +  LAE VA ++   +  N     + C+++A
Sbjct: 513 TGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 557

BLAST of CsaV3_6G031180 vs. ExPASy Swiss-Prot
Match: Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 7.1e-55
Identity = 113/328 (34.45%), Postives = 189/328 (57.62%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           M++GY+H+  + ++LE    +       +  TL  IL V      ++ G+++HGF+ + G
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           F     IG A++DMY KCG +  A   F ++S+ RD VSWN+++T  A+      A+ IF
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK-RDIVSWNSMITRCAQSDNPSAAIDIF 531

Query: 121 SEMQLE-TDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKC 180
            +M +     +  + +  L ACAN+ +   GK IHGFM++++ A D+     L+DMY KC
Sbjct: 532 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 591

Query: 181 RELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGI 240
             LK A+ VF+ +  +++V WNSII  C ++ +   ++ LF  M  + GI+PD +TF  I
Sbjct: 592 GNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 651

Query: 241 LLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDP 300
           + +C H   V+ G ++F SM+E + + P+ EHY C+V+L+G+ G + E  + + +MPF P
Sbjct: 652 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 711

Query: 301 TVPMLERIFNACREHGHSRLAEWVAIRL 328
              +   +  ACR H +  LAE  + +L
Sbjct: 712 DAGVWGTLLGACRLHKNVELAEVASSKL 738

BLAST of CsaV3_6G031180 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 215.7 bits (548), Expect = 9.3e-55
Identity = 109/329 (33.13%), Postives = 187/329 (56.84%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMR-SSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRT 60
           ++ GY        A      MR S + + D  T   ++   T  +DV  G+ +H  V R+
Sbjct: 91  LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150

Query: 61  GFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTI 120
           GF + +Y+ N+LL +Y  CG++ SA   F +M + +D V+WN+++   A +G  E+A+ +
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDLVAWNSVINGFAENGKPEEALAL 210

Query: 121 FSEMQLE-TDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCK 180
           ++EM  +   P+ FT  +LL ACA + AL  GK++H +M++     ++  +  L+D+Y +
Sbjct: 211 YTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR 270

Query: 181 CRELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQG 240
           C  ++ A  +F+ +  ++ V W S+I+G   N     AI+LF+ M   EG+ P  +TF G
Sbjct: 271 CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 330

Query: 241 ILLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFD 300
           IL AC H  +V+ G +YF  M E++ + PR+EH+ CMV+L  + G + +  ++I +MP  
Sbjct: 331 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 390

Query: 301 PTVPMLERIFNACREHGHSRLAEWVAIRL 328
           P V +   +  AC  HG S LAE+  I++
Sbjct: 391 PNVVIWRTLLGACTVHGDSDLAEFARIQI 418

BLAST of CsaV3_6G031180 vs. ExPASy TrEMBL
Match: A0A0A0KFE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G344820 PE=4 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 1.2e-198
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG
Sbjct: 364 MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 423

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF
Sbjct: 424 FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 483

Query: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180
           SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR
Sbjct: 484 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 543

Query: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240
           ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL
Sbjct: 544 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 603

Query: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300
           LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT
Sbjct: 604 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 663

Query: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQNFP 334
           VPMLERIFNACREHGHSRLAEWVAIRLNEQNFP
Sbjct: 664 VPMLERIFNACREHGHSRLAEWVAIRLNEQNFP 696

BLAST of CsaV3_6G031180 vs. ExPASy TrEMBL
Match: A0A5D3DJG9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001110 PE=4 SV=1)

HSP 1 Score: 681.0 bits (1756), Expect = 2.9e-192
Identity = 320/333 (96.10%), Postives = 328/333 (98.50%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTG SDVERGKQVHGFVYRTG
Sbjct: 364 MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGISDVERGKQVHGFVYRTG 423

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTA+ARHGMSEQAMT F
Sbjct: 424 FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAYARHGMSEQAMTSF 483

Query: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180
           SEMQLETDPN+FTFATLLGACANMFALE GKQIHGFMVRNNYAIDIVLTGALVDMYCKCR
Sbjct: 484 SEMQLETDPNSFTFATLLGACANMFALEQGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 543

Query: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240
           EL+YALKVFEHVASRDVVLWNSIILGCCHNRRDMLAI+LFQ MTMEEGIKPDHVTFQG+L
Sbjct: 544 ELEYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIELFQSMTMEEGIKPDHVTFQGVL 603

Query: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300
           LACLHENL+ELGRKYFDSMSEKFC+IPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT
Sbjct: 604 LACLHENLIELGRKYFDSMSEKFCIIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 663

Query: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQNFP 334
           VPMLERIFNACREHGHS LAEWVA+RLNEQNFP
Sbjct: 664 VPMLERIFNACREHGHSSLAEWVAVRLNEQNFP 696

BLAST of CsaV3_6G031180 vs. ExPASy TrEMBL
Match: A0A1S3B4H5 (pentatricopeptide repeat-containing protein At3g26540 OS=Cucumis melo OX=3656 GN=LOC103485666 PE=4 SV=1)

HSP 1 Score: 681.0 bits (1756), Expect = 2.9e-192
Identity = 320/333 (96.10%), Postives = 328/333 (98.50%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTG SDVERGKQVHGFVYRTG
Sbjct: 364 MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGISDVERGKQVHGFVYRTG 423

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTA+ARHGMSEQAMT F
Sbjct: 424 FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAYARHGMSEQAMTSF 483

Query: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180
           SEMQLETDPN+FTFATLLGACANMFALE GKQIHGFMVRNNYAIDIVLTGALVDMYCKCR
Sbjct: 484 SEMQLETDPNSFTFATLLGACANMFALEQGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 543

Query: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240
           EL+YALKVFEHVASRDVVLWNSIILGCCHNRRDMLAI+LFQ MTMEEGIKPDHVTFQG+L
Sbjct: 544 ELEYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIELFQSMTMEEGIKPDHVTFQGVL 603

Query: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300
           LACLHENL+ELGRKYFDSMSEKFC+IPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT
Sbjct: 604 LACLHENLIELGRKYFDSMSEKFCIIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 663

Query: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQNFP 334
           VPMLERIFNACREHGHS LAEWVA+RLNEQNFP
Sbjct: 664 VPMLERIFNACREHGHSSLAEWVAVRLNEQNFP 696

BLAST of CsaV3_6G031180 vs. ExPASy TrEMBL
Match: A0A6J1K1B7 (pentatricopeptide repeat-containing protein At3g26540 OS=Cucurbita maxima OX=3661 GN=LOC111489740 PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 2.9e-168
Identity = 276/331 (83.38%), Postives = 305/331 (92.15%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           MLAGYIHS QWEEAL+FVHLM +SIKD+D  TL LILNVCTG  DVERGKQVHGF+YR G
Sbjct: 364 MLAGYIHSGQWEEALDFVHLMHNSIKDVDHVTLRLILNVCTGLLDVERGKQVHGFIYRIG 423

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           FYANLYIGNALLDMYGKCGNLKSA+VWFYQMSQWRD+VSWNALLT +ARHGMSEQAMTIF
Sbjct: 424 FYANLYIGNALLDMYGKCGNLKSARVWFYQMSQWRDEVSWNALLTTYARHGMSEQAMTIF 483

Query: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180
           SEMQ E  P+ FTFATLL ACAN FAL+ GKQIHGFMVRNNY IDI ++GALVDMYCKCR
Sbjct: 484 SEMQWEAAPSKFTFATLLAACANTFALDQGKQIHGFMVRNNYEIDIAVSGALVDMYCKCR 543

Query: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240
           +L+YALKVFE+ ASRDVVLWNSIILGCCHNRR M+ I+LFQ+M ME+GI PDHVTFQGIL
Sbjct: 544 QLEYALKVFENAASRDVVLWNSIILGCCHNRRGMIVIELFQMMMMEKGINPDHVTFQGIL 603

Query: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300
           LAC++ENLVELGR+YFDSMS+KFC+IPRLEHYECM+ELYG+HGNMDELEKFI NMPFDPT
Sbjct: 604 LACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELEKFIINMPFDPT 663

Query: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQN 332
           VPMLE++ +ACR+HGHSRL EWVAIRLNEQN
Sbjct: 664 VPMLEKVLDACRKHGHSRLGEWVAIRLNEQN 694

BLAST of CsaV3_6G031180 vs. ExPASy TrEMBL
Match: A0A6J1CJX1 (pentatricopeptide repeat-containing protein At3g26540-like OS=Momordica charantia OX=3673 GN=LOC111011852 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 1.1e-167
Identity = 274/331 (82.78%), Postives = 309/331 (93.35%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           MLAGY+HS+QWEEAL+FVHLMRSSIK+ID  TL LILNVCTG  DV RGKQVHGFVYR G
Sbjct: 363 MLAGYVHSAQWEEALDFVHLMRSSIKEIDHVTLRLILNVCTGLLDVARGKQVHGFVYRIG 422

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           FYANLYIGNALLDMYGKCG+LKSA++WFYQMSQWRD VSWNALLT++ARHGMSEQAMTIF
Sbjct: 423 FYANLYIGNALLDMYGKCGSLKSARLWFYQMSQWRDDVSWNALLTSYARHGMSEQAMTIF 482

Query: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180
           +EMQ ET P+ FTFATLLGACAN FA+E GKQIHGFMVRNNY IDIV++GALVDMYCKCR
Sbjct: 483 AEMQWETAPSKFTFATLLGACANTFAIEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCR 542

Query: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240
           +++YALKVFE+VASRDV+LWNSIILGCCHNRR M+ I+LF+LM MEEG+KPDHVTFQGIL
Sbjct: 543 KVEYALKVFENVASRDVILWNSIILGCCHNRRGMIVIELFRLMVMEEGLKPDHVTFQGIL 602

Query: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300
           LAC++ENLVELGR+YFDSMS+KFC+IPRLEHYECM+ELYG+HG MDELE FINNMPFDPT
Sbjct: 603 LACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGTMDELENFINNMPFDPT 662

Query: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQN 332
           VPMLERI  ACR+HG+S+L EWVA+RLNE+N
Sbjct: 663 VPMLERILEACRKHGNSKLGEWVAVRLNERN 693

BLAST of CsaV3_6G031180 vs. TAIR 10
Match: AT3G26540.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 399.1 bits (1024), Expect = 4.2e-111
Identity = 184/332 (55.42%), Postives = 244/332 (73.49%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           ML GY+H+ +W+EAL+F+ LMR  I++ID  TL  ILNVC+G SDV+ GKQ HGF+YR G
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHG 425

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           +  N+ + NALLDMYGKCG L+SA +WF QMS+ RD+VSWNALLT  AR G SEQA++ F
Sbjct: 426 YDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF 485

Query: 121 SEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCR 180
             MQ+E  P+ +T ATLL  CAN+ AL  GK IHGF++R+ Y ID+V+ GA+VDMY KCR
Sbjct: 486 EGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCR 545

Query: 181 ELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGIL 240
              YA++VF+  A+RD++LWNSII GCC N R     +LF L+   EG+KPDHVTF GIL
Sbjct: 546 CFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLE-NEGVKPDHVTFLGIL 605

Query: 241 LACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPT 300
            AC+ E  VELG +YF SMS K+ + P++EHY+CM+ELY ++G + +LE+F+  MPFDP 
Sbjct: 606 QACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPP 665

Query: 301 VPMLERIFNACREHGHSRLAEWVAIRLNEQNF 333
           + ML RI +AC+ +  S+L  W A RL   ++
Sbjct: 666 MQMLTRINDACQRYRWSKLGAWAAKRLMNDHY 696

BLAST of CsaV3_6G031180 vs. TAIR 10
Match: AT1G68930.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 224.9 bits (572), Expect = 1.1e-58
Identity = 110/330 (33.33%), Postives = 186/330 (56.36%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           M+ G   +   +EA+E    M+     +D+     +L  C G   +  GKQ+H  + RT 
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           F  ++Y+G+AL+DMY KC  L  AK  F +M Q ++ VSW A++  + + G +E+A+ IF
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ-KNVVSWTAMVVGYGQTGRAEEAVKIF 360

Query: 121 SEMQLE-TDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKC 180
            +MQ    DP+++T    + ACAN+ +LE G Q HG  + +     + ++ +LV +Y KC
Sbjct: 361 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 420

Query: 181 RELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGI 240
            ++  + ++F  +  RD V W +++       R +  I+LF  M ++ G+KPD VT  G+
Sbjct: 421 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM-VQHGLKPDGVTLTGV 480

Query: 241 LLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDP 300
           + AC    LVE G++YF  M+ ++ ++P + HY CM++L+ + G ++E  +FIN MPF P
Sbjct: 481 ISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPP 540

Query: 301 TVPMLERIFNACREHGHSRLAEWVAIRLNE 330
                  + +ACR  G+  + +W A  L E
Sbjct: 541 DAIGWTTLLSACRNKGNLEIGKWAAESLIE 568

BLAST of CsaV3_6G031180 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 220.3 bits (560), Expect = 2.7e-57
Identity = 114/347 (32.85%), Postives = 201/347 (57.93%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           ++AGY  S  +E+AL  V  M ++    D  TL  +L + +   DV +GK++HG+V R G
Sbjct: 213 IIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG 272

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
             +++YIG++L+DMY K   ++ ++  F ++   RD +SWN+L+  + ++G   +A+ +F
Sbjct: 273 IDSDVYIGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVAGYVQNGRYNEALRLF 332

Query: 121 SEM-QLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKC 180
            +M   +  P    F++++ ACA++  L  GKQ+HG+++R  +  +I +  ALVDMY KC
Sbjct: 333 RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC 392

Query: 181 RELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGI 240
             +K A K+F+ +   D V W +II+G   +     A+ LF+ M   +G+KP+ V F  +
Sbjct: 393 GNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM-KRQGVKPNQVAFVAV 452

Query: 241 LLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDP 300
           L AC H  LV+    YF+SM++ + +   LEHY  + +L G+ G ++E   FI+ M  +P
Sbjct: 453 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEP 512

Query: 301 TVPMLERIFNACREHGHSRLAEWVAIRLNEQNFPN-----IKCSLWA 342
           T  +   + ++C  H +  LAE VA ++   +  N     + C+++A
Sbjct: 513 TGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 557

BLAST of CsaV3_6G031180 vs. TAIR 10
Match: AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 216.1 bits (549), Expect = 5.1e-56
Identity = 113/328 (34.45%), Postives = 189/328 (57.62%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTG 60
           M++GY+H+  + ++LE    +       +  TL  IL V      ++ G+++HGF+ + G
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471

Query: 61  FYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIF 120
           F     IG A++DMY KCG +  A   F ++S+ RD VSWN+++T  A+      A+ IF
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK-RDIVSWNSMITRCAQSDNPSAAIDIF 531

Query: 121 SEMQLE-TDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKC 180
            +M +     +  + +  L ACAN+ +   GK IHGFM++++ A D+     L+DMY KC
Sbjct: 532 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 591

Query: 181 RELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGI 240
             LK A+ VF+ +  +++V WNSII  C ++ +   ++ LF  M  + GI+PD +TF  I
Sbjct: 592 GNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 651

Query: 241 LLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDP 300
           + +C H   V+ G ++F SM+E + + P+ EHY C+V+L+G+ G + E  + + +MPF P
Sbjct: 652 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 711

Query: 301 TVPMLERIFNACREHGHSRLAEWVAIRL 328
              +   +  ACR H +  LAE  + +L
Sbjct: 712 DAGVWGTLLGACRLHKNVELAEVASSKL 738

BLAST of CsaV3_6G031180 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 215.7 bits (548), Expect = 6.6e-56
Identity = 109/329 (33.13%), Postives = 187/329 (56.84%), Query Frame = 0

Query: 1   MLAGYIHSSQWEEALEFVHLMR-SSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRT 60
           ++ GY        A      MR S + + D  T   ++   T  +DV  G+ +H  V R+
Sbjct: 91  LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150

Query: 61  GFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTI 120
           GF + +Y+ N+LL +Y  CG++ SA   F +M + +D V+WN+++   A +G  E+A+ +
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDLVAWNSVINGFAENGKPEEALAL 210

Query: 121 FSEMQLE-TDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCK 180
           ++EM  +   P+ FT  +LL ACA + AL  GK++H +M++     ++  +  L+D+Y +
Sbjct: 211 YTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR 270

Query: 181 CRELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQG 240
           C  ++ A  +F+ +  ++ V W S+I+G   N     AI+LF+ M   EG+ P  +TF G
Sbjct: 271 CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 330

Query: 241 ILLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFD 300
           IL AC H  +V+ G +YF  M E++ + PR+EH+ CMV+L  + G + +  ++I +MP  
Sbjct: 331 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 390

Query: 301 PTVPMLERIFNACREHGHSRLAEWVAIRL 328
           P V +   +  AC  HG S LAE+  I++
Sbjct: 391 PNVVIWRTLLGACTVHGDSDLAEFARIQI 418

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN47720.26.5e-231100.00hypothetical protein Csa_018993 [Cucumis sativus][more]
XP_004144297.12.5e-198100.00pentatricopeptide repeat-containing protein At3g26540 [Cucumis sativus][more]
XP_008441583.16.0e-19296.10PREDICTED: pentatricopeptide repeat-containing protein At3g26540 [Cucumis melo] ... [more]
KAG7016451.12.9e-17879.51Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_038884263.11.2e-17387.05pentatricopeptide repeat-containing protein At3g26540 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q9LRV25.9e-11055.42Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana OX... [more]
Q9CAA81.5e-5733.33Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis th... [more]
Q9LW633.8e-5632.85Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
Q9STE17.1e-5534.45Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... [more]
A8MQA39.3e-5533.13Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0KFE01.2e-198100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G344820 PE=4 SV=1[more]
A0A5D3DJG92.9e-19296.10Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B4H52.9e-19296.10pentatricopeptide repeat-containing protein At3g26540 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1K1B72.9e-16883.38pentatricopeptide repeat-containing protein At3g26540 OS=Cucurbita maxima OX=366... [more]
A0A6J1CJX11.1e-16782.78pentatricopeptide repeat-containing protein At3g26540-like OS=Momordica charanti... [more]
Match NameE-valueIdentityDescription
AT3G26540.14.2e-11155.42Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G68930.11.1e-5833.33pentatricopeptide (PPR) repeat-containing protein [more]
AT3G23330.12.7e-5732.85Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G21300.15.1e-5634.45Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G21065.16.6e-5633.13Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 96..143
e-value: 1.0E-9
score: 38.5
coord: 195..243
e-value: 4.2E-8
score: 33.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 171..191
e-value: 0.22
score: 11.8
coord: 1..23
e-value: 0.37
score: 11.1
coord: 272..295
e-value: 0.93
score: 9.9
coord: 69..92
e-value: 0.018
score: 15.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 198..232
e-value: 3.8E-6
score: 24.7
coord: 98..124
e-value: 3.7E-5
score: 21.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 196..231
score: 9.350046
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 96..126
score: 9.580234
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 148..219
e-value: 5.2E-6
score: 28.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..144
e-value: 4.5E-26
score: 94.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 220..358
e-value: 1.1E-16
score: 63.2
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 63..333
NoneNo IPR availablePANTHERPTHR24015:SF72OSJNBA0006B20.8 PROTEINcoord: 63..333

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G031180.1CsaV3_6G031180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding